RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 GPM6BQ13491 265 aa17.7■□□□□ 0.42
VPS33A-206ENST00000542310 ODR4Q5SWX8 454 aa17.7■□□□□ 0.42
VPS33A-206ENST00000542310 GALNT17Q6IS24 598 aa17.7■□□□□ 0.42
VPS33A-206ENST00000542310 SWSAP1Q6NVH7 229 aa17.7■□□□□ 0.42
VPS33A-206ENST00000542310 RIT2Q99578 217 aa17.7■□□□□ 0.42
VPS33A-206ENST00000542310 C11orf84Q9BUA3 381 aaPredicted RBP17.7■□□□□ 0.42
VPS33A-206ENST00000542310 LMAN2LQ9H0V9 348 aa17.7■□□□□ 0.42
VPS33A-206ENST00000542310 PADI3Q9ULW8 664 aa17.7■□□□□ 0.42
VPS33A-206ENST00000542310 PCDHA4Q9UN74 947 aa17.7■□□□□ 0.42
VPS33A-206ENST00000542310 FNDC1Q4ZHG4 1894 aaPredicted RBP17.69■□□□□ 0.42
VPS33A-206ENST00000542310 DGKIO75912 1065 aa17.69■□□□□ 0.42
VPS33A-206ENST00000542310 C22orf31O95567 290 aa17.69■□□□□ 0.42
VPS33A-206ENST00000542310 STAG3L1P0CL83 205 aa17.69■□□□□ 0.42
VPS33A-206ENST00000542310 ATP4AP20648 1035 aa17.69■□□□□ 0.42
VPS33A-206ENST00000542310 CTNNB1P35222 781 aa17.69■□□□□ 0.42
VPS33A-206ENST00000542310 TMEM62Q0P6H9 643 aa17.69■□□□□ 0.42
VPS33A-206ENST00000542310 ERICH6BQ5W0A0 696 aa17.69■□□□□ 0.42
VPS33A-206ENST00000542310 MOXD1Q6UVY6 613 aa17.69■□□□□ 0.42
VPS33A-206ENST00000542310 CKAP2LQ8IYA6 745 aa17.69■□□□□ 0.42
VPS33A-206ENST00000542310 CMTR2Q8IYT2 770 aaKnown RBP17.69■□□□□ 0.42
VPS33A-206ENST00000542310 CRIPAKQ8N1N5 446 aa17.69■□□□□ 0.42
VPS33A-206ENST00000542310 ZNF710Q8N1W2 664 aa17.69■□□□□ 0.42
VPS33A-206ENST00000542310 UPF3BQ9BZI7 483 aaKnown RBP17.69■□□□□ 0.42
VPS33A-206ENST00000542310 UBE2ZQ9H832 354 aaPredicted RBP17.69■□□□□ 0.42
VPS33A-206ENST00000542310 RNF216Q9NWF9 866 aaPredicted RBP17.69■□□□□ 0.42
VPS33A-206ENST00000542310 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.68■□□□□ 0.42
VPS33A-206ENST00000542310 M0R2N6 131 aa17.68■□□□□ 0.42
VPS33A-206ENST00000542310 MSH4O15457 936 aa17.68■□□□□ 0.42
VPS33A-206ENST00000542310 CDKL5O76039 1030 aa17.68■□□□□ 0.42
VPS33A-206ENST00000542310 SFNP31947 248 aa17.68■□□□□ 0.42
VPS33A-206ENST00000542310 JAK3P52333 1124 aa17.68■□□□□ 0.42
VPS33A-206ENST00000542310 Q4G0T1 1027 aa17.68■□□□□ 0.42
VPS33A-206ENST00000542310 KIAA0319LQ8IZA0 1049 aa17.68■□□□□ 0.42
VPS33A-206ENST00000542310 RDM1Q8NG50 284 aa17.68■□□□□ 0.42
VPS33A-206ENST00000542310 SLC5A5Q92911 643 aa17.68■□□□□ 0.42
VPS33A-206ENST00000542310 PLVAPQ9BX97 442 aa17.68■□□□□ 0.42
VPS33A-206ENST00000542310 ERVK-5Q9HDB9 667 aa17.68■□□□□ 0.42
VPS33A-206ENST00000542310 PDRG1Q9NUG6 133 aa17.68■□□□□ 0.42
VPS33A-206ENST00000542310 GABBR1Q9UBS5 961 aa17.68■□□□□ 0.42
VPS33A-206ENST00000542310 STK36Q9NRP7 1315 aa17.68■□□□□ 0.42
VPS33A-206ENST00000542310 MAGEB2O15479 319 aa17.67■□□□□ 0.42
VPS33A-206ENST00000542310 EDIL3O43854 480 aa17.67■□□□□ 0.42
VPS33A-206ENST00000542310 GAS7O60861 476 aa17.67■□□□□ 0.42
VPS33A-206ENST00000542310 PPFIA3O75145 1194 aa17.67■□□□□ 0.42
VPS33A-206ENST00000542310 BMPR1AP36894 532 aa17.67■□□□□ 0.42
VPS33A-206ENST00000542310 ANAPC15P60006 121 aa17.67■□□□□ 0.42
VPS33A-206ENST00000542310 BTG3Q14201 252 aaPredicted RBP17.67■□□□□ 0.42
VPS33A-206ENST00000542310 COL19A1Q14993 1142 aa17.67■□□□□ 0.42
VPS33A-206ENST00000542310 BLIDQ8IZY5 108 aa17.67■□□□□ 0.42
VPS33A-206ENST00000542310 BANK1Q8NDB2 785 aa17.67■□□□□ 0.42
VPS33A-206ENST00000542310 TBCKQ8TEA7 893 aa17.67■□□□□ 0.42
VPS33A-206ENST00000542310 TEKT3Q9BXF9 490 aa17.67■□□□□ 0.42
VPS33A-206ENST00000542310 NSUN3Q9H649 340 aaKnown RBP17.67■□□□□ 0.42
VPS33A-206ENST00000542310 DISC1Q9NRI5 854 aa17.67■□□□□ 0.42
VPS33A-206ENST00000542310 C1orf112Q9NSG2 853 aa17.67■□□□□ 0.42
VPS33A-206ENST00000542310 SAMM50Q9Y512 469 aa17.67■□□□□ 0.42
VPS33A-206ENST00000542310 BDP1A6H8Y1 2624 aa17.67■□□□□ 0.42
VPS33A-206ENST00000542310 CYP3A7-CYP3A51PA0A087WV96 503 aa17.66■□□□□ 0.42
VPS33A-206ENST00000542310 RPS6KA5O75582 802 aa17.66■□□□□ 0.42
VPS33A-206ENST00000542310 OATP04181 439 aa17.66■□□□□ 0.42
VPS33A-206ENST00000542310 CYP3A7P24462 503 aa17.66■□□□□ 0.42
VPS33A-206ENST00000542310 SARSP49591 514 aaKnown RBP17.66■□□□□ 0.42
VPS33A-206ENST00000542310 CRYBB1P53674 252 aaPredicted RBP17.66■□□□□ 0.42
VPS33A-206ENST00000542310 NPY5RQ15761 445 aa17.66■□□□□ 0.42
VPS33A-206ENST00000542310 LEXMQ3ZCV2 418 aa17.66■□□□□ 0.42
VPS33A-206ENST00000542310 NAALADL2Q58DX5 795 aa17.66■□□□□ 0.42
VPS33A-206ENST00000542310 LRCH2Q5VUJ6 765 aa17.66■□□□□ 0.42
VPS33A-206ENST00000542310 RTN4RL1Q86UN2 441 aaPredicted RBP17.66■□□□□ 0.42
VPS33A-206ENST00000542310 P2RX5Q93086 422 aa17.66■□□□□ 0.42
VPS33A-206ENST00000542310 MBOAT7Q96N66 472 aa17.66■□□□□ 0.42
VPS33A-206ENST00000542310 TMX1Q9H3N1 280 aa17.66■□□□□ 0.42
VPS33A-206ENST00000542310 PPP4R2Q9NY27 417 aa17.66■□□□□ 0.42
VPS33A-206ENST00000542310 GPR182O15218 404 aa17.65■□□□□ 0.42
VPS33A-206ENST00000542310 MMP1P03956 469 aa17.65■□□□□ 0.42
VPS33A-206ENST00000542310 PRKCEQ02156 737 aa17.65■□□□□ 0.42
VPS33A-206ENST00000542310 KRT25Q7Z3Z0 450 aa17.65■□□□□ 0.42
VPS33A-206ENST00000542310 LINC01465Q8N7H1 131 aa17.65■□□□□ 0.42
VPS33A-206ENST00000542310 TMEM40Q8WWA1 233 aa17.65■□□□□ 0.42
VPS33A-206ENST00000542310 NECAB3Q96P71 396 aaPredicted RBP17.65■□□□□ 0.42
VPS33A-206ENST00000542310 UIMC1Q96RL1 719 aa17.65■□□□□ 0.42
VPS33A-206ENST00000542310 MAP7D2Q96T17 732 aa17.65■□□□□ 0.42
VPS33A-206ENST00000542310 NCK2O43639 380 aa17.64■□□□□ 0.41
VPS33A-206ENST00000542310 ZNF862O60290 1169 aa17.64■□□□□ 0.41
VPS33A-206ENST00000542310 EIF5BO60841 1220 aaKnown RBP17.64■□□□□ 0.41
VPS33A-206ENST00000542310 GPR32O75388 356 aa17.64■□□□□ 0.41
VPS33A-206ENST00000542310 PSMD10O75832 226 aa17.64■□□□□ 0.41
VPS33A-206ENST00000542310 TMOD1P28289 359 aa17.64■□□□□ 0.41
VPS33A-206ENST00000542310 SCRN1Q12765 414 aa17.64■□□□□ 0.41
VPS33A-206ENST00000542310 NFX1Q12986 1120 aaKnown RBP17.64■□□□□ 0.41
VPS33A-206ENST00000542310 STK3Q13188 491 aa17.64■□□□□ 0.41
VPS33A-206ENST00000542310 NONOQ15233 471 aaKnown RBP eCLIP17.64■□□□□ 0.41
VPS33A-206ENST00000542310 TMEM266Q2M3C6 531 aa17.64■□□□□ 0.41
VPS33A-206ENST00000542310 PUS10Q3MIT2 529 aaKnown RBP17.64■□□□□ 0.41
VPS33A-206ENST00000542310 B3GNT9Q6UX72 402 aa17.64■□□□□ 0.41
VPS33A-206ENST00000542310 PABPC5Q96DU9 382 aaKnown RBP17.64■□□□□ 0.41
VPS33A-206ENST00000542310 UNC45AQ9H3U1 944 aa17.64■□□□□ 0.41
VPS33A-206ENST00000542310 RGS18Q9NS28 235 aa17.64■□□□□ 0.41
VPS33A-206ENST00000542310 LRFN2Q9ULH4 789 aa17.64■□□□□ 0.41
VPS33A-206ENST00000542310 GINS2Q9Y248 185 aa17.64■□□□□ 0.41
VPS33A-206ENST00000542310 NOC2LQ9Y3T9 749 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms