RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 PDE8AO60658 829 aa10.8□□□□□ -0.68
MRPS35-204ENST00000542199 ASLP04424 464 aa10.8□□□□□ -0.68
MRPS35-204ENST00000542199 IGFALSP35858 605 aa10.8□□□□□ -0.68
MRPS35-204ENST00000542199 ZNF827Q17R98 1081 aa10.8□□□□□ -0.68
MRPS35-204ENST00000542199 RNF187Q5TA31 235 aaPredicted RBP10.8□□□□□ -0.68
MRPS35-204ENST00000542199 ZC3H7AQ8IWR0 971 aaKnown RBP10.8□□□□□ -0.68
MRPS35-204ENST00000542199 LILRA2Q8N149 483 aa10.8□□□□□ -0.68
MRPS35-204ENST00000542199 ABHD4Q8TB40 342 aa10.8□□□□□ -0.68
MRPS35-204ENST00000542199 TRMT2BQ96GJ1 504 aaKnown RBP10.8□□□□□ -0.68
MRPS35-204ENST00000542199 KCNJ15Q99712 375 aa10.8□□□□□ -0.68
MRPS35-204ENST00000542199 MTFR1LQ9H019 292 aa10.8□□□□□ -0.68
MRPS35-204ENST00000542199 IFT57Q9NWB7 429 aa10.8□□□□□ -0.68
MRPS35-204ENST00000542199 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.8□□□□□ -0.68
MRPS35-204ENST00000542199 COQ6Q9Y2Z9 468 aa10.8□□□□□ -0.68
MRPS35-204ENST00000542199 PRKAB1Q9Y478 270 aa10.8□□□□□ -0.68
MRPS35-204ENST00000542199 SHANK3Q9BYB0 1731 aa10.79□□□□□ -0.68
MRPS35-204ENST00000542199 GSG1L2A8MUP6 293 aa10.79□□□□□ -0.68
MRPS35-204ENST00000542199 CYP4F8P98187 520 aa10.79□□□□□ -0.68
MRPS35-204ENST00000542199 SPC25Q9HBM1 224 aa10.79□□□□□ -0.68
MRPS35-204ENST00000542199 POLKQ9UBT6 870 aa10.79□□□□□ -0.68
MRPS35-204ENST00000542199 ADGRE2Q9UHX3 823 aa10.79□□□□□ -0.68
MRPS35-204ENST00000542199 KAT6BQ8WYB5 2073 aa10.79□□□□□ -0.68
MRPS35-204ENST00000542199 PCDH11XQ9BZA7 1347 aa10.79□□□□□ -0.68
MRPS35-204ENST00000542199 PCDH11YQ9BZA8 1340 aa10.79□□□□□ -0.68
MRPS35-204ENST00000542199 RGPD2P0DJD1 1756 aa10.78□□□□□ -0.68
MRPS35-204ENST00000542199 H7BY64 318 aa10.78□□□□□ -0.68
MRPS35-204ENST00000542199 CYP27B1O15528 508 aa10.78□□□□□ -0.68
MRPS35-204ENST00000542199 DNAJC6O75061 913 aa10.78□□□□□ -0.68
MRPS35-204ENST00000542199 CKMP06732 381 aa10.78□□□□□ -0.68
MRPS35-204ENST00000542199 JMJD7P0C870 316 aa10.78□□□□□ -0.68
MRPS35-204ENST00000542199 NAT1P18440 290 aa10.78□□□□□ -0.68
MRPS35-204ENST00000542199 SDHBP21912 280 aa10.78□□□□□ -0.68
MRPS35-204ENST00000542199 USP33Q8TEY7 942 aa10.78□□□□□ -0.68
MRPS35-204ENST00000542199 GPATCH3Q96I76 525 aa10.78□□□□□ -0.68
MRPS35-204ENST00000542199 KIRREL1Q96J84 757 aa10.78□□□□□ -0.68
MRPS35-204ENST00000542199 X6R8D5 127 aa10.78□□□□□ -0.68
MRPS35-204ENST00000542199 FAM47E-STBD1D6RA91 191 aa10.77□□□□□ -0.69
MRPS35-204ENST00000542199 PPM1GO15355 546 aaPredicted RBP10.77□□□□□ -0.69
MRPS35-204ENST00000542199 BICRALQ6AI39 1079 aa10.77□□□□□ -0.69
MRPS35-204ENST00000542199 ZCCHC8Q6NZY4 707 aaKnown RBP10.77□□□□□ -0.69
MRPS35-204ENST00000542199 POLR3GLQ9BT43 218 aa10.77□□□□□ -0.69
MRPS35-204ENST00000542199 PANK3Q9H999 370 aa10.77□□□□□ -0.69
MRPS35-204ENST00000542199 RXFP1Q9HBX9 757 aa10.77□□□□□ -0.69
MRPS35-204ENST00000542199 ANKRD26Q9UPS8 1709 aa10.77□□□□□ -0.69
MRPS35-204ENST00000542199 DOT1LQ8TEK3 1739 aa10.76□□□□□ -0.69
MRPS35-204ENST00000542199 KPNA6O60684 536 aa10.76□□□□□ -0.69
MRPS35-204ENST00000542199 NTRK1P04629 796 aa10.76□□□□□ -0.69
MRPS35-204ENST00000542199 PYGMP11217 842 aa10.76□□□□□ -0.69
MRPS35-204ENST00000542199 AFMP43652 599 aa10.76□□□□□ -0.69
MRPS35-204ENST00000542199 UBR7Q8N806 425 aa10.76□□□□□ -0.69
MRPS35-204ENST00000542199 IGSF22Q8N9C0 903 aa10.76□□□□□ -0.69
MRPS35-204ENST00000542199 DDX1Q92499 740 aaKnown RBP10.76□□□□□ -0.69
MRPS35-204ENST00000542199 TNFRSF12AQ9NP84 129 aa10.76□□□□□ -0.69
MRPS35-204ENST00000542199 CBLCQ9ULV8 474 aa10.76□□□□□ -0.69
MRPS35-204ENST00000542199 PNPLA7Q6ZV29 1317 aa10.76□□□□□ -0.69
MRPS35-204ENST00000542199 A0A1W2PQJ5 194 aa10.75□□□□□ -0.69
MRPS35-204ENST00000542199 CCDC66A2RUB6 948 aa10.75□□□□□ -0.69
MRPS35-204ENST00000542199 WNT9AO14904 365 aa10.75□□□□□ -0.69
MRPS35-204ENST00000542199 GLRX3O76003 335 aaKnown RBP10.75□□□□□ -0.69
MRPS35-204ENST00000542199 VIL1P09327 827 aaKnown RBP10.75□□□□□ -0.69
MRPS35-204ENST00000542199 GLI4P10075 376 aa10.75□□□□□ -0.69
MRPS35-204ENST00000542199 STAT3P40763 770 aa10.75□□□□□ -0.69
MRPS35-204ENST00000542199 DNM2P50570 870 aa10.75□□□□□ -0.69
MRPS35-204ENST00000542199 EIF4A2Q14240 407 aaKnown RBP10.75□□□□□ -0.69
MRPS35-204ENST00000542199 PCBP1Q15365 356 aaKnown RBP eCLIP10.75□□□□□ -0.69
MRPS35-204ENST00000542199 PIK3R6Q5UE93 754 aa10.75□□□□□ -0.69
MRPS35-204ENST00000542199 WWC2Q6AWC2 1192 aa10.75□□□□□ -0.69
MRPS35-204ENST00000542199 RNF180Q86T96 592 aa10.75□□□□□ -0.69
MRPS35-204ENST00000542199 Q8N3U1 123 aa10.75□□□□□ -0.69
MRPS35-204ENST00000542199 FAM126AQ9BYI3 521 aaPredicted RBP10.75□□□□□ -0.69
MRPS35-204ENST00000542199 CRTAC1Q9NQ79 661 aa10.75□□□□□ -0.69
MRPS35-204ENST00000542199 SAMD15Q9P1V8 674 aa10.75□□□□□ -0.69
MRPS35-204ENST00000542199 CCNL1Q9UK58 526 aaPredicted RBP10.75□□□□□ -0.69
MRPS35-204ENST00000542199 PLEKHG2Q9H7P9 1386 aa10.75□□□□□ -0.69
MRPS35-204ENST00000542199 COL6A2P12110 1019 aa10.74□□□□□ -0.69
MRPS35-204ENST00000542199 PNLIPP16233 465 aa10.74□□□□□ -0.69
MRPS35-204ENST00000542199 TNNT2P45379 298 aaPredicted RBP10.74□□□□□ -0.69
MRPS35-204ENST00000542199 NEK4P51957 841 aa10.74□□□□□ -0.69
MRPS35-204ENST00000542199 SNX17Q15036 470 aa10.74□□□□□ -0.69
MRPS35-204ENST00000542199 CDCA2Q69YH5 1023 aaPredicted RBP10.74□□□□□ -0.69
MRPS35-204ENST00000542199 ATG4DQ86TL0 474 aaPredicted RBP10.74□□□□□ -0.69
MRPS35-204ENST00000542199 CISD2Q8N5K1 135 aaKnown RBP10.74□□□□□ -0.69
MRPS35-204ENST00000542199 FBXW5Q969U6 566 aa10.74□□□□□ -0.69
MRPS35-204ENST00000542199 COA3Q9Y2R0 106 aaPredicted RBP10.74□□□□□ -0.69
MRPS35-204ENST00000542199 YBX2Q9Y2T7 364 aaKnown RBP10.74□□□□□ -0.69
MRPS35-204ENST00000542199 SIT1Q9Y3P8 196 aa10.74□□□□□ -0.69
MRPS35-204ENST00000542199 MAP3K5Q99683 1374 aa10.74□□□□□ -0.69
MRPS35-204ENST00000542199 SEPT7Q16181 437 aaKnown RBP10.73□□□□□ -0.69
MRPS35-204ENST00000542199 CFAP100Q494V2 611 aa10.73□□□□□ -0.69
MRPS35-204ENST00000542199 PKN3Q6P5Z2 889 aa10.73□□□□□ -0.69
MRPS35-204ENST00000542199 RIOX2Q8IUF8 465 aa10.73□□□□□ -0.69
MRPS35-204ENST00000542199 SYT17Q9BSW7 474 aa10.73□□□□□ -0.69
MRPS35-204ENST00000542199 CELF4Q9BZC1 486 aaKnown RBP10.73□□□□□ -0.69
MRPS35-204ENST00000542199 EPB41L1Q9H4G0 881 aa10.73□□□□□ -0.69
MRPS35-204ENST00000542199 TFCP2L1Q9NZI6 479 aa10.73□□□□□ -0.69
MRPS35-204ENST00000542199 IGSF1Q8N6C5 1336 aa10.73□□□□□ -0.69
MRPS35-204ENST00000542199 PALLDQ8WX93 1383 aa10.73□□□□□ -0.69
MRPS35-204ENST00000542199 LY75O60449 1722 aa10.72□□□□□ -0.69
MRPS35-204ENST00000542199 PKD1L3Q7Z443 1732 aa10.72□□□□□ -0.69
MRPS35-204ENST00000542199 PAPLNO95428 1278 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms