RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 KCNV1Q6PIU1 500 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 LRRC55Q6ZSA7 311 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 VSIG10LQ86VR7 867 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 ADGRF4Q8IZF3 695 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 MRPL43Q8N983 215 aaKnown RBP11.32□□□□□ -0.6
CHFR-220ENST00000541817 GPR152Q8TDT2 470 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 FTHL17Q9BXU8 183 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 RTEL1Q9NZ71 1219 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 WNT16Q9UBV4 365 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 TUBE1Q9UJT0 475 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 ANGPTL2Q9UKU9 493 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 SMG5Q9UPR3 1016 aaKnown RBP11.32□□□□□ -0.6
CHFR-220ENST00000541817 C2orf16Q68DN1 1984 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 NRCAMQ92823 1304 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.31□□□□□ -0.6
CHFR-220ENST00000541817 FOXP2O15409 715 aa11.31□□□□□ -0.6
CHFR-220ENST00000541817 N4BP1O75113 896 aaKnown RBP11.31□□□□□ -0.6
CHFR-220ENST00000541817 CXCL14O95715 111 aa11.31□□□□□ -0.6
CHFR-220ENST00000541817 NCLP19338 710 aaKnown RBP11.31□□□□□ -0.6
CHFR-220ENST00000541817 CSTF1Q05048 431 aaKnown RBP11.31□□□□□ -0.6
CHFR-220ENST00000541817 SEMA3FQ13275 785 aa11.31□□□□□ -0.6
CHFR-220ENST00000541817 SMC1AQ14683 1233 aaKnown RBP11.31□□□□□ -0.6
CHFR-220ENST00000541817 MARCH8Q5T0T0 291 aa11.31□□□□□ -0.6
CHFR-220ENST00000541817 N4BP2L1Q5TBK1 243 aaPredicted RBP11.31□□□□□ -0.6
CHFR-220ENST00000541817 TAF2Q6P1X5 1199 aa11.31□□□□□ -0.6
CHFR-220ENST00000541817 KCNT2Q6UVM3 1135 aa11.31□□□□□ -0.6
CHFR-220ENST00000541817 FCHSD1Q86WN1 690 aa11.31□□□□□ -0.6
CHFR-220ENST00000541817 SIRT2Q8IXJ6 389 aa11.31□□□□□ -0.6
CHFR-220ENST00000541817 GPR161Q8N6U8 529 aaKnown RBP11.31□□□□□ -0.6
CHFR-220ENST00000541817 BACH2Q9BYV9 841 aa11.31□□□□□ -0.6
CHFR-220ENST00000541817 SPATA6Q9NWH7 488 aaPredicted RBP11.31□□□□□ -0.6
CHFR-220ENST00000541817 ZNF215Q9UL58 517 aaPredicted RBP11.31□□□□□ -0.6
CHFR-220ENST00000541817 LZTS1Q9Y250 596 aa11.31□□□□□ -0.6
CHFR-220ENST00000541817 MRPL11Q9Y3B7 192 aaKnown RBP11.31□□□□□ -0.6
CHFR-220ENST00000541817 FAM208BQ5VWN6 2430 aa11.3□□□□□ -0.6
CHFR-220ENST00000541817 NT5C1B-RDH14C9J2C7 533 aa11.3□□□□□ -0.6
CHFR-220ENST00000541817 DHX16O60231 1041 aaKnown RBP11.3□□□□□ -0.6
CHFR-220ENST00000541817 TGFB3P10600 412 aa11.3□□□□□ -0.6
CHFR-220ENST00000541817 LAG3P18627 525 aa11.3□□□□□ -0.6
CHFR-220ENST00000541817 CCND2P30279 289 aa11.3□□□□□ -0.6
CHFR-220ENST00000541817 TSSK4Q6SA08 328 aa11.3□□□□□ -0.6
CHFR-220ENST00000541817 CCDC149Q6ZUS6 474 aa11.3□□□□□ -0.6
CHFR-220ENST00000541817 OTOP3Q7RTS5 596 aa11.3□□□□□ -0.6
CHFR-220ENST00000541817 SLC44A3Q8N4M1 653 aa11.3□□□□□ -0.6
CHFR-220ENST00000541817 ADAM2Q99965 735 aa11.3□□□□□ -0.6
CHFR-220ENST00000541817 ZKSCAN3Q9BRR0 538 aa11.3□□□□□ -0.6
CHFR-220ENST00000541817 CDHR5Q9HBB8 845 aa11.3□□□□□ -0.6
CHFR-220ENST00000541817 ZMIZ1Q9ULJ6 1067 aa11.3□□□□□ -0.6
CHFR-220ENST00000541817 TRPV2Q9Y5S1 764 aa11.3□□□□□ -0.6
CHFR-220ENST00000541817 SPEGQ15772 3267 aa11.29□□□□□ -0.6
CHFR-220ENST00000541817 FASNP49327 2511 aaKnown RBP11.29□□□□□ -0.6
CHFR-220ENST00000541817 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
CHFR-220ENST00000541817 C1QTNF9BB2RNN3 333 aa11.29□□□□□ -0.6
CHFR-220ENST00000541817 GDF9O60383 454 aa11.29□□□□□ -0.6
CHFR-220ENST00000541817 C1QTNF9P0C862 333 aa11.29□□□□□ -0.6
CHFR-220ENST00000541817 SNHG28P0DPA3 235 aa11.29□□□□□ -0.6
CHFR-220ENST00000541817 MYBP10242 640 aa11.29□□□□□ -0.6
CHFR-220ENST00000541817 GBP2P32456 591 aaPredicted RBP11.29□□□□□ -0.6
CHFR-220ENST00000541817 TCF7P36402 384 aaPredicted RBP11.29□□□□□ -0.6
CHFR-220ENST00000541817 HSD17B4P51659 736 aa11.29□□□□□ -0.6
CHFR-220ENST00000541817 KRT17Q04695 432 aa11.29□□□□□ -0.6
CHFR-220ENST00000541817 VPS53Q5VIR6 699 aa11.29□□□□□ -0.6
CHFR-220ENST00000541817 METTL7BQ6UX53 244 aa11.29□□□□□ -0.6
CHFR-220ENST00000541817 TRAPPC12Q8WVT3 735 aa11.29□□□□□ -0.6
CHFR-220ENST00000541817 ATRIPQ8WXE1 791 aa11.29□□□□□ -0.6
CHFR-220ENST00000541817 SECISBP2LQ93073 1101 aaKnown RBP11.29□□□□□ -0.6
CHFR-220ENST00000541817 ZNF558Q96NG5 402 aa11.29□□□□□ -0.6
CHFR-220ENST00000541817 GINS2Q9Y248 185 aa11.29□□□□□ -0.6
CHFR-220ENST00000541817 MIA3Q5JRA6 1907 aa11.29□□□□□ -0.6
CHFR-220ENST00000541817 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.28□□□□□ -0.6
CHFR-220ENST00000541817 DENND3A2RUS2 1198 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 SLC30A4O14863 429 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 SPTLC1O15269 473 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 LAMTOR5O43504 91 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 ORC4O43929 436 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 RAB11FIP3O75154 756 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 PROS1P07225 676 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 METAP2P50579 478 aaKnown RBP eCLIP11.28□□□□□ -0.6
CHFR-220ENST00000541817 MRPS9P82933 396 aaKnown RBP11.28□□□□□ -0.6
CHFR-220ENST00000541817 IER5Q5VY09 327 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 PHLDB3Q6NSJ2 640 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 STOX1Q6ZVD7 989 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 GPR149Q86SP6 731 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 CABP7Q86V35 215 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 TMEM87AQ8NBN3 555 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 PJA1Q8NG27 643 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 PANK1Q8TE04 598 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 SLC22A17Q8WUG5 538 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 PPP1R16BQ96T49 567 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 CELF4Q9BZC1 486 aaKnown RBP11.28□□□□□ -0.6
CHFR-220ENST00000541817 ARHGEF3Q9NR81 526 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 SPG21Q9NZD8 308 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 IGSF9Q9P2J2 1179 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 NOC2LQ9Y3T9 749 aaKnown RBP11.28□□□□□ -0.6
CHFR-220ENST00000541817 MTF2Q9Y483 593 aaPredicted RBP11.28□□□□□ -0.6
CHFR-220ENST00000541817 PCDHA1Q9Y5I3 950 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 IGSF9BQ9UPX0 1349 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 PATJQ8NI35 1801 aa11.28□□□□□ -0.6
CHFR-220ENST00000541817 ZZEF1O43149 2961 aa11.27□□□□□ -0.61
CHFR-220ENST00000541817 MBLAC1A4D2B0 266 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms