RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 VMP1Q96GC9 406 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 C1orf159Q96HA4 380 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 TMEM41AQ96HV5 264 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 RCC1LQ96I51 464 aaKnown RBP6.34□□□□□ -1.39
DDB1-219ENST00000541513 CCDC140Q96MF4 163 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 ORAI2Q96SN7 254 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 BARD1Q99728 777 aaKnown RBP6.34□□□□□ -1.39
DDB1-219ENST00000541513 LGR4Q9BXB1 951 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 STK31Q9BXU1 1019 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 XPO4Q9C0E2 1151 aaKnown RBP6.34□□□□□ -1.39
DDB1-219ENST00000541513 BTBD1Q9H0C5 482 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 GBP3Q9H0R5 595 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 NFKBIL1Q9UBC1 381 aaPredicted RBP6.34□□□□□ -1.39
DDB1-219ENST00000541513 ZNF112Q9UJU3 913 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 SNX5Q9Y5X3 404 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 AHDC1Q5TGY3 1603 aaPredicted RBP6.34□□□□□ -1.39
DDB1-219ENST00000541513 SYNDIG1LA6NDD5 238 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 MASP2O00187 686 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 ARVCFO00192 962 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 NOP56O00567 594 aaKnown RBP6.33□□□□□ -1.4
DDB1-219ENST00000541513 WNT7AO00755 349 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 H2AFYO75367 372 aaKnown RBP6.33□□□□□ -1.4
DDB1-219ENST00000541513 TIPRLO75663 272 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 SCG5P05408 212 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 HSPA5P11021 654 aaKnown RBP6.33□□□□□ -1.4
DDB1-219ENST00000541513 IDEP14735 1019 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 PEX19P40855 299 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 STAT1P42224 750 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 MAN2A2P49641 1150 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 AGFG1P52594 562 aaKnown RBP6.33□□□□□ -1.4
DDB1-219ENST00000541513 DCAF7P61962 342 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 PLAURQ03405 335 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 MEA1Q16626 185 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 CLEC16AQ2KHT3 1053 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 ZNF423Q2M1K9 1284 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 SLC35F1Q5T1Q4 408 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 HECTD3Q5T447 861 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 LMBRD2Q68DH5 695 aaPredicted RBP6.33□□□□□ -1.4
DDB1-219ENST00000541513 PGBD2Q6P3X8 592 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 POMZP3Q6PJE2 187 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 MPRIPQ6WCQ1 1025 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 UBE2Q1Q7Z7E8 422 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 LCA5Q86VQ0 697 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 SIAH1Q8IUQ4 282 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 TMEM192Q8IY95 271 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 MIER2Q8N344 545 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 EFHBQ8N7U6 833 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 CHST14Q8NCH0 376 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 BSNDQ8WZ55 320 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 JADE3Q92613 823 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 PHKBQ93100 1093 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 PPP1R14AQ96A00 147 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 ATP6V1E2Q96A05 226 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 TMEM169Q96HH4 297 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 GMCL1Q96IK5 515 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 SLC6A18Q96N87 628 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 NT5C1BQ96P26 610 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 PNMA5Q96PV4 448 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 ASB2Q96Q27 587 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 CDK19Q9BWU1 502 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 APOL5Q9BWW9 433 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 B3GNT5Q9BYG0 378 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 STARD7Q9NQZ5 370 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 ARGLU1Q9NWB6 273 aaPredicted RBP6.33□□□□□ -1.4
DDB1-219ENST00000541513 IFT80Q9P2H3 777 aaPredicted RBP6.33□□□□□ -1.4
DDB1-219ENST00000541513 EPS15L1Q9UBC2 864 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 PCDHA9Q9Y5H5 950 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 PHLPP1O60346 1717 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 MYOM1P52179 1685 aa6.33□□□□□ -1.4
DDB1-219ENST00000541513 SYNRGQ9UMZ2 1314 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 A0A087X0M5 115 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 A0A1B0GX30 115 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 A0A1W2PNR3 127 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 WDR64B1ANS9 1081 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 GDF9O60383 454 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 DKC1O60832 514 aaKnown RBP eCLIP6.32□□□□□ -1.4
DDB1-219ENST00000541513 UBXN7O94888 489 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 TBX18O95935 607 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 YBX3P16989 372 aaKnown RBP eCLIP6.32□□□□□ -1.4
DDB1-219ENST00000541513 POLR2BP30876 1174 aaKnown RBP6.32□□□□□ -1.4
DDB1-219ENST00000541513 TECP42680 631 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 ZNF131P52739 623 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 SNX16P57768 344 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 PSMC1P62191 440 aaKnown RBP6.32□□□□□ -1.4
DDB1-219ENST00000541513 PHC1P78364 1004 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 TMF1P82094 1093 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 MLLT1Q03111 559 aaPredicted RBP6.32□□□□□ -1.4
DDB1-219ENST00000541513 TAF12Q16514 161 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 TTC31Q49AM3 519 aaPredicted RBP6.32□□□□□ -1.4
DDB1-219ENST00000541513 ANKRD39Q53RE8 183 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 ARSJQ5FYB0 599 aaPredicted RBP6.32□□□□□ -1.4
DDB1-219ENST00000541513 CCDC158Q5M9N0 1113 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 LRFN4Q6PJG9 635 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 RPAINQ86UA6 219 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 GRAMD1CQ8IYS0 662 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 IGSF22Q8N9C0 903 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 DCAF4Q8WV16 495 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 BRI3BPQ8WY22 251 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 SH3KBP1Q96B97 665 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 MVB12AQ96EY5 273 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms