RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 MYZAPP0CAP1 466 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 USP11P51784 963 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 MARSP56192 900 aaKnown RBP11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 GPBP1Q86WP2 473 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 C1orf131Q8NDD1 294 aaKnown RBP11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 CABS1Q96KC9 395 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 DDX47Q9H0S4 455 aaKnown RBP11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 PCDHA12Q9UN75 941 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 ADAMTSL1Q8N6G6 1762 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 POTEB3A0JP26 581 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 POTECB2RU33 542 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 SART1O43290 800 aaKnown RBP11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 CHRM1P11229 460 aaPredicted RBP11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 ITGA4P13612 1032 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 TMOD1P28289 359 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 CTNNA1P35221 906 aaKnown RBP11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 ZNF844Q08AG5 666 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 SEPT2Q15019 361 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 DACT2Q5SW24 774 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 PPP4R3AQ6IN85 833 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 DPY19L2P1Q6NXN4 242 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 POTEBQ6S5H4 581 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 LRIG3Q6UXM1 1119 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 YTHDF3Q7Z739 585 aaKnown RBP11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 CCDC65Q8IXS2 484 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 LRRC57Q8N9N7 239 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 ZNRF3Q9ULT6 936 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 ATAD5Q96QE3 1844 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 ARFGEF1Q9Y6D6 1849 aa11.51□□□□□ -0.57
PHACTR3-209ENST00000541461 GPR75-ASB3A0A0A6YYF3 556 aa11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 TMCO5BA8MYB1 307 aa11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 hCG_1984214I3L0E3 225 aa11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 HOXA7P31268 230 aaPredicted RBP11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 CASP5P51878 434 aa11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 STRIP1Q5VSL9 837 aa11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 TTBK2Q6IQ55 1244 aa11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 ADGRF4Q8IZF3 695 aa11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 METTL13Q8N6R0 699 aa11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 ZNF713Q8N859 430 aaPredicted RBP11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 GPATCH11Q8N954 259 aa11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 UBLCP1Q8WVY7 318 aaPredicted RBP11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 CYFIP2Q96F07 1278 aa11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 PBKQ96KB5 322 aa11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 SPAG5Q96R06 1193 aa11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 NCAPGQ9BPX3 1015 aa11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 JMJD4Q9H9V9 463 aa11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 GEMIN8Q9NWZ8 242 aaKnown RBP11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 FBXL5Q9UKA1 691 aa11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 HDAC9Q9UKV0 1011 aa11.5□□□□□ -0.57
PHACTR3-209ENST00000541461 BTNL10A8MVZ5 291 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 CES2O00748 559 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 BACH1O14867 736 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 CETN3O15182 167 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 DAPK3O43293 454 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 ZBTB48P10074 688 aaPredicted RBP11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 UCHL3P15374 230 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 CYP11B2P19099 503 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 NR2F2P24468 414 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 SLC16A2P36021 539 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 STAT3P40763 770 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 USP8P40818 1118 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 NOVP48745 357 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 ACTN3Q08043 901 aaPredicted RBP11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 CUL1Q13616 776 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 ALKBH5Q6P6C2 394 aaKnown RBP11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 C6orf89Q6UWU4 347 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 RBM46Q8TBY0 533 aaKnown RBP11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 ACTRT1Q8TDG2 376 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 TBC1D22AQ8WUA7 517 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 LRRC4CQ9HCJ2 640 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 MTMR4Q9NYA4 1195 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 CNOT8Q9UFF9 292 aaKnown RBP11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 AMACRQ9UHK6 382 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 NAGPAQ9UK23 515 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 NOC2LQ9Y3T9 749 aaKnown RBP11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 ZNF646O15015 1829 aaPredicted RBP11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 LOC102724159A0A0B4J2E5 919 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 PGRMC1O00264 195 aaKnown RBP11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 KRIT1O00522 736 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 KRT18P05783 430 aaKnown RBP11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 LMNB1P20700 586 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 CLK2P49760 499 aaKnown RBP11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 RHBDL3P58872 404 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 CXCL9Q07325 125 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 PWP2Q15269 919 aaKnown RBP11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 QPCTQ16769 361 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 ODF2Q5BJF6 829 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 ARSHQ5FYA8 562 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 CCDC91Q7Z6B0 441 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 CCDC13Q8IYE1 715 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 TPCN2Q8NHX9 752 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 LRRC45Q96CN5 670 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 NT5C3AQ9H0P0 336 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 VCPKMTQ9H867 229 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 SLC12A6Q9UHW9 1150 aa11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 AJAP1Q9UKB5 411 aaPredicted RBP11.49□□□□□ -0.57
PHACTR3-209ENST00000541461 PNMA6FA0A0J9YX94 578 aa11.48□□□□□ -0.57
PHACTR3-209ENST00000541461 FAM170AA1A519 330 aa11.48□□□□□ -0.57
PHACTR3-209ENST00000541461 GMNCA6NCL1 334 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms