RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 ERVK-5Q9HDB9 667 aa13.55□□□□□ -0.24
COPA-205ENST00000541366 SORCS3Q9UPU3 1222 aa13.55□□□□□ -0.24
COPA-205ENST00000541366 PCDHA2Q9Y5H9 948 aa13.55□□□□□ -0.24
COPA-205ENST00000541366 ID4P47928 161 aa13.54□□□□□ -0.24
COPA-205ENST00000541366 NUBP1P53384 320 aa13.54□□□□□ -0.24
COPA-205ENST00000541366 MTMR3Q13615 1198 aa13.54□□□□□ -0.24
COPA-205ENST00000541366 UBE2SQ16763 222 aa13.54□□□□□ -0.24
COPA-205ENST00000541366 KANK3Q6NY19 840 aa13.54□□□□□ -0.24
COPA-205ENST00000541366 ADSSL1Q8N142 457 aa13.54□□□□□ -0.24
COPA-205ENST00000541366 FEZF2Q8TBJ5 459 aa13.54□□□□□ -0.24
COPA-205ENST00000541366 CUL5Q93034 780 aa13.54□□□□□ -0.24
COPA-205ENST00000541366 NKD2Q969F2 451 aaPredicted RBP13.54□□□□□ -0.24
COPA-205ENST00000541366 PPP1R16BQ96T49 567 aa13.54□□□□□ -0.24
COPA-205ENST00000541366 MYL10Q9BUA6 226 aa13.54□□□□□ -0.24
COPA-205ENST00000541366 ENTPD7Q9NQZ7 604 aa13.54□□□□□ -0.24
COPA-205ENST00000541366 AAASQ9NRG9 546 aa13.54□□□□□ -0.24
COPA-205ENST00000541366 UBIAD1Q9Y5Z9 338 aa13.54□□□□□ -0.24
COPA-205ENST00000541366 EVPLQ92817 2033 aa13.54□□□□□ -0.24
COPA-205ENST00000541366 ZNF292O60281 2723 aa13.54□□□□□ -0.24
COPA-205ENST00000541366 DENND3A2RUS2 1198 aa13.53□□□□□ -0.24
COPA-205ENST00000541366 C9IYK1 514 aa13.53□□□□□ -0.24
COPA-205ENST00000541366 PIK3CDO00329 1044 aa13.53□□□□□ -0.24
COPA-205ENST00000541366 RPS6KA5O75582 802 aa13.53□□□□□ -0.24
COPA-205ENST00000541366 HDAC1Q13547 482 aaPredicted RBP13.53□□□□□ -0.24
COPA-205ENST00000541366 MTMR1Q13613 665 aa13.53□□□□□ -0.24
COPA-205ENST00000541366 ASTLQ6HA08 431 aaPredicted RBP13.53□□□□□ -0.24
COPA-205ENST00000541366 MTHFD1LQ6UB35 978 aa13.53□□□□□ -0.24
COPA-205ENST00000541366 LRRC55Q6ZSA7 311 aa13.53□□□□□ -0.24
COPA-205ENST00000541366 ERMP1Q7Z2K6 904 aa13.53□□□□□ -0.24
COPA-205ENST00000541366 UBALD2Q8IYN6 164 aa13.53□□□□□ -0.24
COPA-205ENST00000541366 RASGRP4Q8TDF6 673 aa13.53□□□□□ -0.24
COPA-205ENST00000541366 MRPS27Q92552 414 aaKnown RBP13.53□□□□□ -0.24
COPA-205ENST00000541366 RGS18Q9NS28 235 aa13.53□□□□□ -0.24
COPA-205ENST00000541366 ST3GAL5Q9UNP4 418 aa13.53□□□□□ -0.24
COPA-205ENST00000541366 NR2E1Q9Y466 385 aa13.53□□□□□ -0.24
COPA-205ENST00000541366 KDM3AQ9Y4C1 1321 aa13.53□□□□□ -0.24
COPA-205ENST00000541366 FRYLO94915 3013 aa13.52□□□□□ -0.24
COPA-205ENST00000541366 SMIM35A0A1B0GVV1 85 aa13.52□□□□□ -0.25
COPA-205ENST00000541366 hCG_1642624A0A1W2PR95 340 aa13.52□□□□□ -0.25
COPA-205ENST00000541366 SRGAP2BP0DMP2 458 aa13.52□□□□□ -0.25
COPA-205ENST00000541366 PDE4AP27815 886 aa13.52□□□□□ -0.25
COPA-205ENST00000541366 WTAPQ15007 396 aa13.52□□□□□ -0.25
COPA-205ENST00000541366 DIEXFQ68CQ4 756 aaKnown RBP13.52□□□□□ -0.25
COPA-205ENST00000541366 PDE12Q6L8Q7 609 aaKnown RBP13.52□□□□□ -0.25
COPA-205ENST00000541366 SLC24A5Q71RS6 500 aa13.52□□□□□ -0.25
COPA-205ENST00000541366 CMTR1Q8N1G2 835 aaKnown RBP13.52□□□□□ -0.25
COPA-205ENST00000541366 C12orf76Q8N812 135 aaPredicted RBP13.52□□□□□ -0.25
COPA-205ENST00000541366 CYP2W1Q8TAV3 490 aa13.52□□□□□ -0.25
COPA-205ENST00000541366 CDHR1Q96JP9 859 aa13.52□□□□□ -0.25
COPA-205ENST00000541366 AZI2Q9H6S1 392 aa13.52□□□□□ -0.25
COPA-205ENST00000541366 JPH1Q9HDC5 661 aaPredicted RBP13.52□□□□□ -0.25
COPA-205ENST00000541366 RNF19AQ9NV58 838 aa13.52□□□□□ -0.25
COPA-205ENST00000541366 SLC9A2Q9UBY0 812 aa13.52□□□□□ -0.25
COPA-205ENST00000541366 LIMD1Q9UGP4 676 aa13.52□□□□□ -0.25
COPA-205ENST00000541366 HCFC2Q9Y5Z7 792 aa13.52□□□□□ -0.25
COPA-205ENST00000541366 FSD2A1L4K1 749 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 PI15O43692 258 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 PLEKHA8P1O95397 391 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 RPLP2P05387 115 aaKnown RBP13.51□□□□□ -0.25
COPA-205ENST00000541366 CYP21A2P08686 494 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 HOXB8P17481 243 aaPredicted RBP13.51□□□□□ -0.25
COPA-205ENST00000541366 KLRC1P26715 233 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 STAT5BP51692 787 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 ANTXR2P58335 489 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 ACTR2P61160 394 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 PLCB3Q01970 1234 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 TRDNQ13061 729 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 KCNT2Q6UVM3 1135 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 TMC7Q7Z402 723 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 FAM228AQ86W67 206 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 KIAA0319LQ8IZA0 1049 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 FLCNQ8NFG4 579 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 RRP36Q96EU6 259 aaKnown RBP13.51□□□□□ -0.25
COPA-205ENST00000541366 CASD1Q96PB1 797 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 ADAM7Q9H2U9 754 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 MFSD1Q9H3U5 465 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 PSTPIP2Q9H939 334 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 ATP6V0A4Q9HBG4 840 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 JADE2Q9NQC1 790 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 LZTS1Q9Y250 596 aa13.51□□□□□ -0.25
COPA-205ENST00000541366 NCOR2Q9Y618 2525 aa13.5□□□□□ -0.25
COPA-205ENST00000541366 CACNA1BQ00975 2339 aa13.5□□□□□ -0.25
COPA-205ENST00000541366 ERICH2A1L162 156 aa13.5□□□□□ -0.25
COPA-205ENST00000541366 LAG3P18627 525 aa13.5□□□□□ -0.25
COPA-205ENST00000541366 PTH1RQ03431 593 aa13.5□□□□□ -0.25
COPA-205ENST00000541366 KIZQ2M2Z5 673 aa13.5□□□□□ -0.25
COPA-205ENST00000541366 RARS2Q5T160 578 aaKnown RBP13.5□□□□□ -0.25
COPA-205ENST00000541366 CWF19L1Q69YN2 538 aaKnown RBP13.5□□□□□ -0.25
COPA-205ENST00000541366 CATIPQ7Z7H3 387 aa13.5□□□□□ -0.25
COPA-205ENST00000541366 NME8Q8N427 588 aa13.5□□□□□ -0.25
COPA-205ENST00000541366 CASP10Q92851 521 aa13.5□□□□□ -0.25
COPA-205ENST00000541366 OSMRQ99650 979 aa13.5□□□□□ -0.25
COPA-205ENST00000541366 SPZ1Q9BXG8 430 aa13.5□□□□□ -0.25
COPA-205ENST00000541366 OSBPL3Q9H4L5 887 aa13.5□□□□□ -0.25
COPA-205ENST00000541366 NGRNQ9NPE2 291 aaKnown RBP13.5□□□□□ -0.25
COPA-205ENST00000541366 KCNH7Q9NS40 1196 aa13.5□□□□□ -0.25
COPA-205ENST00000541366 C1orf112Q9NSG2 853 aa13.5□□□□□ -0.25
COPA-205ENST00000541366 TMEM161AQ9NX61 479 aa13.5□□□□□ -0.25
COPA-205ENST00000541366 PUF60Q9UHX1 559 aaKnown RBP13.5□□□□□ -0.25
COPA-205ENST00000541366 PCDHA6Q9UN73 950 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms