RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 SLC9A7Q96T83 725 aa18.99■□□□□ 0.63
CD9-209ENST00000540891 NIFKQ9BYG3 293 aaKnown RBP18.99■□□□□ 0.63
CD9-209ENST00000540891 NRBP2Q9NSY0 501 aa18.99■□□□□ 0.63
CD9-209ENST00000540891 SMC3Q9UQE7 1217 aa18.99■□□□□ 0.63
CD9-209ENST00000540891 YBX2Q9Y2T7 364 aaKnown RBP18.99■□□□□ 0.63
CD9-209ENST00000540891 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.99■□□□□ 0.63
CD9-209ENST00000540891 TRPV2Q9Y5S1 764 aa18.99■□□□□ 0.63
CD9-209ENST00000540891 PTPRSQ13332 1948 aa18.99■□□□□ 0.63
CD9-209ENST00000540891 MYOGP15173 224 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 TXKP42681 527 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 TRAPPC10P48553 1259 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 TOB1P50616 345 aaPredicted RBP18.98■□□□□ 0.63
CD9-209ENST00000540891 IKBKEQ14164 716 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 NBR1Q14596 966 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 FBXO47Q5MNV8 452 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 TTC38Q5R3I4 469 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 ZNF697Q5TEC3 545 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 IER5Q5VY09 327 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.98■□□□□ 0.63
CD9-209ENST00000540891 TMCO2Q7Z6W1 182 aaPredicted RBP18.98■□□□□ 0.63
CD9-209ENST00000540891 NME8Q8N427 588 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 PHOSPHO2Q8TCD6 241 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 SEPT8Q92599 483 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 SH2D3AQ9BRG2 576 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 TTC12Q9H892 705 aaPredicted RBP18.98■□□□□ 0.63
CD9-209ENST00000540891 MTMR10Q9NXD2 777 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 RGL1Q9NZL6 768 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 SEPT9Q9UHD8 586 aaPredicted RBP18.98■□□□□ 0.63
CD9-209ENST00000540891 PCDHA12Q9UN75 941 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 KDM3AQ9Y4C1 1321 aa18.98■□□□□ 0.63
CD9-209ENST00000540891 GBF1Q92538 1859 aa18.97■□□□□ 0.63
CD9-209ENST00000540891 P4HBP07237 508 aaKnown RBP18.97■□□□□ 0.63
CD9-209ENST00000540891 QARSP47897 775 aaKnown RBP18.97■□□□□ 0.63
CD9-209ENST00000540891 ORC2Q13416 577 aaPredicted RBP18.97■□□□□ 0.63
CD9-209ENST00000540891 GNL2Q13823 731 aaKnown RBP18.97■□□□□ 0.63
CD9-209ENST00000540891 ANO5Q75V66 913 aa18.97■□□□□ 0.63
CD9-209ENST00000540891 HERC6Q8IVU3 1022 aa18.97■□□□□ 0.63
CD9-209ENST00000540891 TIFAQ96CG3 184 aa18.97■□□□□ 0.63
CD9-209ENST00000540891 FAM161BQ96MY7 647 aa18.97■□□□□ 0.63
CD9-209ENST00000540891 IFIH1Q9BYX4 1025 aaKnown RBP18.97■□□□□ 0.63
CD9-209ENST00000540891 CELF4Q9BZC1 486 aaKnown RBP18.97■□□□□ 0.63
CD9-209ENST00000540891 SEMA6BQ9H3T3 888 aa18.97■□□□□ 0.63
CD9-209ENST00000540891 AGO3Q9H9G7 860 aaKnown RBP18.97■□□□□ 0.63
CD9-209ENST00000540891 CDHR5Q9HBB8 845 aa18.97■□□□□ 0.63
CD9-209ENST00000540891 TMEM265A0A087WTH1 108 aa18.96■□□□□ 0.63
CD9-209ENST00000540891 MAGEB2O15479 319 aa18.96■□□□□ 0.63
CD9-209ENST00000540891 KCNJ6P48051 423 aa18.96■□□□□ 0.63
CD9-209ENST00000540891 CLCN3P51790 818 aa18.96■□□□□ 0.63
CD9-209ENST00000540891 RAB30Q15771 203 aa18.96■□□□□ 0.63
CD9-209ENST00000540891 MTERF2Q49AM1 385 aa18.96■□□□□ 0.63
CD9-209ENST00000540891 PLA2G4FQ68DD2 849 aa18.96■□□□□ 0.63
CD9-209ENST00000540891 EFCAB12Q6NXP0 572 aa18.96■□□□□ 0.63
CD9-209ENST00000540891 LRRC71Q8N4P6 559 aa18.96■□□□□ 0.63
CD9-209ENST00000540891 C4orf32Q8N8J7 132 aa18.96■□□□□ 0.63
CD9-209ENST00000540891 DYDC2Q96IM9 177 aa18.96■□□□□ 0.63
CD9-209ENST00000540891 GUCD1Q96NT3 240 aa18.96■□□□□ 0.63
CD9-209ENST00000540891 LXNQ9BS40 222 aa18.96■□□□□ 0.63
CD9-209ENST00000540891 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.95■□□□□ 0.62
CD9-209ENST00000540891 POTEMA6NI47 508 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 DDX11L8A8MPP1 907 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 EFCAB14O75071 495 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 SLITRK3O94933 977 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 VTNP04004 478 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 OR52Z1P0C646 297 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 CYP4A11Q02928 519 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 DRP2Q13474 957 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 CTTNQ14247 550 aaKnown RBP18.95■□□□□ 0.62
CD9-209ENST00000540891 TSHZ1Q6ZSZ6 1077 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 C4orf19Q8IY42 314 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 METTL13Q8N6R0 699 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 TMEM40Q8WWA1 233 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 APBB2Q92870 758 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 HSD17B14Q9BPX1 270 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 EIF2AK1Q9BQI3 630 aaKnown RBP18.95■□□□□ 0.62
CD9-209ENST00000540891 NKX2-4Q9H2Z4 354 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 NOL7Q9UMY1 257 aaKnown RBP18.95■□□□□ 0.62
CD9-209ENST00000540891 PCDHB6Q9Y5E3 794 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 PCDHA11Q9Y5I1 949 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 SQORQ9Y6N5 450 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 MICAL3Q7RTP6 2002 aa18.95■□□□□ 0.62
CD9-209ENST00000540891 IGKV6-21A0A0C4DH24 114 aa18.94■□□□□ 0.62
CD9-209ENST00000540891 H3BQV1 296 aa18.94■□□□□ 0.62
CD9-209ENST00000540891 M0QZ92 97 aa18.94■□□□□ 0.62
CD9-209ENST00000540891 GPR32O75388 356 aa18.94■□□□□ 0.62
CD9-209ENST00000540891 CD52P31358 61 aa18.94■□□□□ 0.62
CD9-209ENST00000540891 TBC1D8BQ0IIM8 1120 aa18.94■□□□□ 0.62
CD9-209ENST00000540891 LARP1BQ659C4 914 aaKnown RBP18.94■□□□□ 0.62
CD9-209ENST00000540891 MCTP1Q6DN14 999 aa18.94■□□□□ 0.62
CD9-209ENST00000540891 ZNF579Q8NAF0 562 aaKnown RBP18.94■□□□□ 0.62
CD9-209ENST00000540891 PPP1R16BQ96T49 567 aa18.94■□□□□ 0.62
CD9-209ENST00000540891 MSRAQ9UJ68 235 aa18.94■□□□□ 0.62
CD9-209ENST00000540891 EVPLQ92817 2033 aa18.94■□□□□ 0.62
CD9-209ENST00000540891 CDH23Q9H251 3354 aa18.93■□□□□ 0.62
CD9-209ENST00000540891 K7ELQ4 463 aaPredicted RBP18.93■□□□□ 0.62
CD9-209ENST00000540891 ZBTB39O15060 712 aa18.93■□□□□ 0.62
CD9-209ENST00000540891 DKC1O60832 514 aaKnown RBP eCLIP18.93■□□□□ 0.62
CD9-209ENST00000540891 ARHGEF15O94989 841 aa18.93■□□□□ 0.62
CD9-209ENST00000540891 NPEPPSP55786 919 aa18.93■□□□□ 0.62
CD9-209ENST00000540891 USP38Q8NB14 1042 aa18.93■□□□□ 0.62
CD9-209ENST00000540891 LINC01599Q8WXQ3 324 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms