RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 KPNA1P52294 538 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-209ENST00000540819 YARSP54577 528 aaKnown RBP6.41□□□□□ -1.38
PRKDC-209ENST00000540819 PPFIA1Q13136 1202 aa6.41□□□□□ -1.38
PRKDC-209ENST00000540819 LRRC32Q14392 662 aa6.41□□□□□ -1.38
PRKDC-209ENST00000540819 ATAT1Q5SQI0 421 aa6.41□□□□□ -1.38
PRKDC-209ENST00000540819 SLC6A19Q695T7 634 aa6.41□□□□□ -1.38
PRKDC-209ENST00000540819 CIAPIN1Q6FI81 312 aa6.41□□□□□ -1.38
PRKDC-209ENST00000540819 ABHD17CQ6PCB6 329 aa6.41□□□□□ -1.38
PRKDC-209ENST00000540819 CCDC149Q6ZUS6 474 aa6.41□□□□□ -1.38
PRKDC-209ENST00000540819 SLC5A5Q92911 643 aa6.41□□□□□ -1.38
PRKDC-209ENST00000540819 SYTL4Q96C24 671 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-209ENST00000540819 RCC1LQ96I51 464 aaKnown RBP6.41□□□□□ -1.38
PRKDC-209ENST00000540819 OSBPL5Q9H0X9 879 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-209ENST00000540819 TRIT1Q9H3H1 467 aaKnown RBP6.41□□□□□ -1.38
PRKDC-209ENST00000540819 UNC45AQ9H3U1 944 aa6.41□□□□□ -1.38
PRKDC-209ENST00000540819 WHRNQ9P202 907 aa6.41□□□□□ -1.38
PRKDC-209ENST00000540819 B4GALT6Q9UBX8 382 aa6.41□□□□□ -1.38
PRKDC-209ENST00000540819 TPCN1Q9ULQ1 816 aa6.41□□□□□ -1.38
PRKDC-209ENST00000540819 AKT3Q9Y243 479 aa6.41□□□□□ -1.38
PRKDC-209ENST00000540819 PCDHA9Q9Y5H5 950 aa6.41□□□□□ -1.38
PRKDC-209ENST00000540819 SLC4A7Q9Y6M7 1214 aa6.41□□□□□ -1.38
PRKDC-209ENST00000540819 A6NCN8 305 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 TRAF5O00463 557 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 ESR1P03372 595 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 KRT1P04264 644 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 PTMAP06454 111 aaKnown RBP6.4□□□□□ -1.38
PRKDC-209ENST00000540819 GFRA1P56159 465 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 TNFAIP2Q03169 654 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 SEMA5AQ13591 1074 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 ZNF267Q14586 743 aaPredicted RBP6.4□□□□□ -1.38
PRKDC-209ENST00000540819 KCNA10Q16322 511 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 CDC37Q16543 378 aaPredicted RBP6.4□□□□□ -1.38
PRKDC-209ENST00000540819 ANKRD39Q53RE8 183 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 RALGPS1Q5JS13 557 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 DGKKQ5KSL6 1271 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 STYK1Q6J9G0 422 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 ANKRD18AQ8IVF6 992 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 CCDC144CPQ8IYA2 1237 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 PHACTR4Q8IZ21 702 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 OR8H2Q8N162 312 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 ZBTB34Q8NCN2 500 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 FAM156AQ8NDB6 213 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.4□□□□□ -1.38
PRKDC-209ENST00000540819 CHTF18Q8WVB6 975 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 ACSF2Q96CM8 615 aaPredicted RBP6.4□□□□□ -1.38
PRKDC-209ENST00000540819 TEKT5Q96M29 485 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 ACO2Q99798 780 aaKnown RBP6.4□□□□□ -1.38
PRKDC-209ENST00000540819 PDLIM7Q9NR12 457 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 CYP26B1Q9NR63 512 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 RRN3Q9NYV6 651 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 TRAF6Q9Y4K3 522 aa6.4□□□□□ -1.38
PRKDC-209ENST00000540819 FAM227AF5H4B4 570 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 M0R3H8 397 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 NCAM2O15394 837 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 CLEC3AO75596 197 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 MBD4O95243 580 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 CNOT4O95628 575 aaKnown RBP6.39□□□□□ -1.39
PRKDC-209ENST00000540819 SOD2P04179 222 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 HSP90AB1P08238 724 aaKnown RBP6.39□□□□□ -1.39
PRKDC-209ENST00000540819 TPP2P29144 1249 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-209ENST00000540819 HOXC12P31275 282 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 GUCY1A3Q02108 690 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 PRKG2Q13237 762 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 TERF2Q15554 542 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 DDB1Q16531 1140 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 KIAA0753Q2KHM9 967 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 DPP9Q86TI2 863 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 AMIGO3Q86WK7 504 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 MRPL41Q8IXM3 137 aaKnown RBP6.39□□□□□ -1.39
PRKDC-209ENST00000540819 IGSF22Q8N9C0 903 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 FAM13CQ8NE31 585 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 DIS3LQ8TF46 1054 aaKnown RBP6.39□□□□□ -1.39
PRKDC-209ENST00000540819 DCAF4Q8WV16 495 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 TMEM87BQ96K49 555 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 TBCBQ99426 244 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 DPH2Q9BQC3 489 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-209ENST00000540819 ADAMTS10Q9H324 1103 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 KCNK12Q9HB15 430 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 GPATCH2Q9NW75 528 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 TJP2Q9UDY2 1190 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 TTLL3Q9Y4R7 772 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 AFG3L2Q9Y4W6 797 aa6.39□□□□□ -1.39
PRKDC-209ENST00000540819 ETV2O00321 342 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-209ENST00000540819 CPP00450 1065 aa6.38□□□□□ -1.39
PRKDC-209ENST00000540819 ATP2A2P16615 1042 aaKnown RBP6.38□□□□□ -1.39
PRKDC-209ENST00000540819 CAPN3P20807 821 aa6.38□□□□□ -1.39
PRKDC-209ENST00000540819 ERVFC1P60507 584 aa6.38□□□□□ -1.39
PRKDC-209ENST00000540819 DCAF15Q66K64 600 aa6.38□□□□□ -1.39
PRKDC-209ENST00000540819 FAAH2Q6GMR7 532 aa6.38□□□□□ -1.39
PRKDC-209ENST00000540819 FAM180BQ6P0A1 224 aa6.38□□□□□ -1.39
PRKDC-209ENST00000540819 DARS2Q6PI48 645 aaKnown RBP6.38□□□□□ -1.39
PRKDC-209ENST00000540819 OVCH2Q7RTZ1 564 aa6.38□□□□□ -1.39
PRKDC-209ENST00000540819 GPR155Q7Z3F1 870 aa6.38□□□□□ -1.39
PRKDC-209ENST00000540819 PTRH1Q86Y79 214 aaKnown RBP6.38□□□□□ -1.39
PRKDC-209ENST00000540819 MCATQ8IVS2 390 aaKnown RBP6.38□□□□□ -1.39
PRKDC-209ENST00000540819 KRT78Q8N1N4 520 aa6.38□□□□□ -1.39
PRKDC-209ENST00000540819 ARHGEF39Q8N4T4 335 aa6.38□□□□□ -1.39
PRKDC-209ENST00000540819 OR2C3Q8N628 320 aa6.38□□□□□ -1.39
PRKDC-209ENST00000540819 MYCT1Q8N699 235 aa6.38□□□□□ -1.39
PRKDC-209ENST00000540819 HPS3Q969F9 1004 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms