RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, human

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-229	ENST00000540643	GRIN1	Q05586	938 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	SF3B3	Q15393	1217 aa	Known RBP	13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	TAF7	Q15545	349 aa	Predicted RBP	13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	PUS10	Q3MIT2	529 aa	Known RBP	13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	TMEM63B	Q5T3F8	832 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	MCM10	Q7L590	875 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	MRPL1	Q9BYD6	325 aa	Known RBP	13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	GOLPH3L	Q9H4A5	285 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	EFR3B	Q9Y2G0	817 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	RNF17	Q9BXT8	1623 aa	Known RBP	13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	BCR	P11274	1271 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	SCG2	P13521	617 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	KRT20	P35900	424 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	MXI1	P50539	228 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	CLUL1	Q15846	466 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	ANKRD20A4	Q4UJ75	823 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	TRMT2A	Q8IZ69	625 aa	Known RBP	13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	RPGR	Q92834	1020 aa	Known RBP	13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	SNTN	A6NMZ2	147 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	BAIAP3	O94812	1187 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	LDHB	P07195	334 aa	Known RBP	13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	ASPH	Q12797	758 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	PPP2R5C	Q13362	524 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	NFE2L2	Q16236	605 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	MARK2	Q7KZI7	788 aa	Known RBP	13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	DCLK2	Q8N568	766 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	ANKRD36BP1	Q96IX9	119 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	SPC25	Q9HBM1	224 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	AMOTL2	Q9Y2J4	779 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	POC1B-GALNT4	F8VUJ3	575 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643		F8VZ95	297 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	TEX28	O15482	410 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	CHEK2	O96017	543 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	IST1	P53990	364 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	C21orf59	P57076	290 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	ADAM17	P78536	824 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	TMEM62	Q0P6H9	643 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	NEK5	Q6P3R8	708 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	ZNF570	Q96NI8	536 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	DAPK2	Q9UIK4	370 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	GMEB1	Q9Y692	573 aa		13.91	□□□□□ -0.18
SFI1-229	ENST00000540643	ABLIM1	O14639	778 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	NCK2	O43639	380 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	ENO2	P09104	434 aa	Predicted RBP	13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	AP1B1	Q10567	949 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	CUL1	Q13616	776 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	CDC37	Q16543	378 aa	Predicted RBP	13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	C1orf141	Q5JVX7	400 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	TTC30B	Q8N4P2	665 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	TC2N	Q8N9U0	490 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	SPIRE2	Q8WWL2	714 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	CITED4	Q96RK1	184 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	OSBPL7	Q9BZF2	842 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	IFT122	Q9HBG6	1241 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	ATP6V0A2	Q9Y487	856 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	CEP152	O94986	1710 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	GUCY1B2	O75343	617 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	ACSL3	O95573	720 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	COPB1	P53618	953 aa	Known RBP	13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	PLCB3	Q01970	1234 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	LBR	Q14739	615 aa	Known RBP	13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	EZH2	Q15910	746 aa	Known RBP	13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	NDUFA5	Q16718	116 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	ANKRD35	Q8N283	1001 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	RNF169	Q8NCN4	708 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	TNIP2	Q8NFZ5	429 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	STMN3	Q9NZ72	180 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	RABGEF1	Q9UJ41	708 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	GGA2	Q9UJY4	613 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	MADD	Q8WXG6	1647 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643		A0A1W2PQ27	194 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643		A0A1W2PQ64	194 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643		A0A1W2PQD8	194 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	TUBA4A	P68366	448 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	SFR1	Q86XK3	245 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	PLIN2	Q99541	437 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	CAAP1	Q9H8G2	361 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	EMILIN1	Q9Y6C2	1016 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	MAP3K5	Q99683	1374 aa		13.9	□□□□□ -0.18
SFI1-229	ENST00000540643	PIK3C2G	O75747	1445 aa		13.89	□□□□□ -0.19
SFI1-229	ENST00000540643		A8MUI8	341 aa		13.89	□□□□□ -0.19
SFI1-229	ENST00000540643	P4HA1	P13674	534 aa		13.89	□□□□□ -0.19
SFI1-229	ENST00000540643	BRAF	P15056	766 aa		13.89	□□□□□ -0.19
SFI1-229	ENST00000540643	RXRA	P19793	462 aa		13.89	□□□□□ -0.19
SFI1-229	ENST00000540643	CHKA	P35790	457 aa		13.89	□□□□□ -0.19
SFI1-229	ENST00000540643	FNTA	P49354	379 aa		13.89	□□□□□ -0.19
SFI1-229	ENST00000540643	PRKG1	Q13976	671 aa		13.89	□□□□□ -0.19
SFI1-229	ENST00000540643	ZBTB46	Q86UZ6	589 aa		13.89	□□□□□ -0.19
SFI1-229	ENST00000540643	CTAGE3P	Q8IX95	158 aa		13.89	□□□□□ -0.19
SFI1-229	ENST00000540643	SRRM1	Q8IYB3	904 aa	Known RBP	13.89	□□□□□ -0.19
SFI1-229	ENST00000540643	MCRS1	Q96EZ8	462 aa		13.89	□□□□□ -0.19
SFI1-229	ENST00000540643	WASL	O00401	505 aa	Predicted RBP	13.89	□□□□□ -0.19
SFI1-229	ENST00000540643	MGRN1	O60291	552 aa		13.89	□□□□□ -0.19
SFI1-229	ENST00000540643	CA4	P22748	312 aa		13.89	□□□□□ -0.19
SFI1-229	ENST00000540643	EEF1G	P26641	437 aa	Known RBP	13.89	□□□□□ -0.19
SFI1-229	ENST00000540643	TCAIM	Q8N3R3	496 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 96 ms