RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 NLRC4Q9NPP4 1024 aa11.23□□□□□ -0.61
GPD2-213ENST00000540309 MTRF1LQ9UGC7 380 aaKnown RBP11.23□□□□□ -0.61
GPD2-213ENST00000540309 AMACRQ9UHK6 382 aa11.23□□□□□ -0.61
GPD2-213ENST00000540309 AMFRQ9UKV5 643 aa11.23□□□□□ -0.61
GPD2-213ENST00000540309 NCANO14594 1321 aa11.23□□□□□ -0.61
GPD2-213ENST00000540309 BCL9O00512 1426 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 TRAF5O00463 557 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 CCNT1O60563 726 aaKnown RBP11.22□□□□□ -0.61
GPD2-213ENST00000540309 ADAMTS2O95450 1211 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 VIMP08670 466 aaKnown RBP11.22□□□□□ -0.61
GPD2-213ENST00000540309 VEGFAP15692 232 aaPredicted RBP11.22□□□□□ -0.61
GPD2-213ENST00000540309 PECAM1P16284 738 aaPredicted RBP11.22□□□□□ -0.61
GPD2-213ENST00000540309 FERP16591 822 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 MRPS35P82673 323 aaKnown RBP11.22□□□□□ -0.61
GPD2-213ENST00000540309 PTK2Q05397 1052 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 KLRC3Q07444 240 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 LBRQ14739 615 aaKnown RBP11.22□□□□□ -0.61
GPD2-213ENST00000540309 SGSM1Q2NKQ1 1148 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 KRT79Q5XKE5 535 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 DNAJC10Q8IXB1 793 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 LRRC34Q8IZ02 419 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 PNMA5Q96PV4 448 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 NT5C3AQ9H0P0 336 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 PANK4Q9NVE7 773 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 PCYOX1Q9UHG3 505 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 PNMA2Q9UL42 364 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 ARL2BPQ9Y2Y0 163 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 KDM3AQ9Y4C1 1321 aa11.22□□□□□ -0.61
GPD2-213ENST00000540309 TNRC6CQ9HCJ0 1690 aaKnown RBP11.21□□□□□ -0.61
GPD2-213ENST00000540309 DCDC2CA8MYV0 355 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 ADAMTS3O15072 1205 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 TTI1O43156 1089 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 RARGP13631 454 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 RXRBP28702 533 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 CHRNA3P32297 505 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 FLT3P36888 993 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 TECP42680 631 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 DR1Q01658 176 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 KIAA1755Q5JYT7 1200 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 RNF43Q68DV7 783 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 DPY19L2P1Q6NXN4 242 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 APBB1IPQ7Z5R6 666 aaPredicted RBP11.21□□□□□ -0.61
GPD2-213ENST00000540309 TBC1D1Q86TI0 1168 aaPredicted RBP11.21□□□□□ -0.61
GPD2-213ENST00000540309 DDX42Q86XP3 938 aaKnown RBP eCLIP11.21□□□□□ -0.61
GPD2-213ENST00000540309 MFN1Q8IWA4 741 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 HELBQ8NG08 1087 aaPredicted RBP11.21□□□□□ -0.61
GPD2-213ENST00000540309 DDX12PQ92771 950 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 DNAJC19Q96DA6 116 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 THOC1Q96FV9 657 aaKnown RBP11.21□□□□□ -0.61
GPD2-213ENST00000540309 EEF2KMTQ96G04 330 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 ZNF570Q96NI8 536 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 NAP1L4Q99733 375 aaKnown RBP11.21□□□□□ -0.61
GPD2-213ENST00000540309 TAOK3Q9H2K8 898 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 POLD4Q9HCU8 107 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 PACSIN2Q9UNF0 486 aaPredicted RBP11.21□□□□□ -0.61
GPD2-213ENST00000540309 PITPNM2Q9BZ72 1349 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 ITGB4P16144 1822 aa11.21□□□□□ -0.61
GPD2-213ENST00000540309 PHLPP1O60346 1717 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 SOCS7O14512 581 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 CETN3O15182 167 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 SNUPNO95149 360 aaKnown RBP11.21□□□□□ -0.62
GPD2-213ENST00000540309 CYP19A1P11511 503 aaPredicted RBP11.21□□□□□ -0.62
GPD2-213ENST00000540309 NEFHP12036 1026 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 MSH2P43246 934 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 TRAF1Q13077 416 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 PDCD2Q16342 344 aaPredicted RBP11.21□□□□□ -0.62
GPD2-213ENST00000540309 CAVIN4Q5BKX8 364 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 FAM26FQ5R3K3 315 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 TRMT10CQ7L0Y3 403 aaKnown RBP11.21□□□□□ -0.62
GPD2-213ENST00000540309 CYFIP1Q7L576 1253 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 ZNF571Q7Z3V5 609 aaPredicted RBP11.21□□□□□ -0.62
GPD2-213ENST00000540309 TMC4Q7Z404 712 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 CCDC65Q8IXS2 484 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 FAM133AQ8N9E0 248 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 MORC4Q8TE76 937 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 GPKOWQ92917 476 aaPredicted RBP eCLIP11.21□□□□□ -0.62
GPD2-213ENST00000540309 KLHL29Q96CT2 875 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 TMEM237Q96Q45 408 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 PLIN2Q99541 437 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 METTL14Q9HCE5 456 aaKnown RBP11.21□□□□□ -0.62
GPD2-213ENST00000540309 USP40Q9NVE5 1235 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 ETAA1Q9NY74 926 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 PRKAG3Q9UGI9 489 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 ATP8A1Q9Y2Q0 1164 aa11.21□□□□□ -0.62
GPD2-213ENST00000540309 FRMD3A2A2Y4 597 aa11.2□□□□□ -0.62
GPD2-213ENST00000540309 MIF4GDA9UHW6 222 aaKnown RBP11.2□□□□□ -0.62
GPD2-213ENST00000540309 TCEA3O75764 348 aa11.2□□□□□ -0.62
GPD2-213ENST00000540309 NPTXRO95502 500 aa11.2□□□□□ -0.62
GPD2-213ENST00000540309 EYA4O95677 639 aa11.2□□□□□ -0.62
GPD2-213ENST00000540309 TMEM253P0C7T8 217 aa11.2□□□□□ -0.62
GPD2-213ENST00000540309 UCHL3P15374 230 aa11.2□□□□□ -0.62
GPD2-213ENST00000540309 LMNB1P20700 586 aa11.2□□□□□ -0.62
GPD2-213ENST00000540309 EPS15P42566 896 aa11.2□□□□□ -0.62
GPD2-213ENST00000540309 ALDH5A1P51649 535 aaPredicted RBP11.2□□□□□ -0.62
GPD2-213ENST00000540309 JAM2P57087 298 aa11.2□□□□□ -0.62
GPD2-213ENST00000540309 MAPK7Q13164 816 aa11.2□□□□□ -0.62
GPD2-213ENST00000540309 CNGA2Q16280 664 aa11.2□□□□□ -0.62
GPD2-213ENST00000540309 LETM2Q2VYF4 491 aa11.2□□□□□ -0.62
GPD2-213ENST00000540309 ANKRD20A2Q5SQ80 823 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms