RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 TNMDQ9H2S6 317 aa21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 MAGEF1Q9HAY2 307 aa21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 ANKEF1Q9NU02 776 aa21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 ERAP1Q9NZ08 941 aa21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 DBR1Q9UK59 544 aaKnown RBP21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 OGDHLQ9ULD0 1010 aa21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 H3BRB1 525 aa21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 CASP1P29466 404 aa21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 MNX1P50219 401 aaPredicted RBP21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 NPEPPSP55786 919 aa21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 CCDC183Q5T5S1 534 aa21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 KANK3Q6NY19 840 aa21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 ELOA2Q8IYF1 753 aaPredicted RBP21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 DIS3LQ8TF46 1054 aaKnown RBP21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 ERCC4Q92889 916 aaPredicted RBP21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 RNPEPQ9H4A4 650 aa21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 TUT1Q9H6E5 874 aaKnown RBP21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 SEPT9Q9UHD8 586 aaPredicted RBP21.09■□□□□ 0.97
TNFRSF1A-213ENST00000540022 F2P00734 622 aa21.08■□□□□ 0.96
TNFRSF1A-213ENST00000540022 CST5P28325 142 aaPredicted RBP21.08■□□□□ 0.96
TNFRSF1A-213ENST00000540022 POSTNQ15063 836 aa21.08■□□□□ 0.96
TNFRSF1A-213ENST00000540022 LRRC41Q15345 812 aa21.08■□□□□ 0.96
TNFRSF1A-213ENST00000540022 OTUD6AQ7L8S5 288 aa21.08■□□□□ 0.96
TNFRSF1A-213ENST00000540022 ANKLE1Q8NAG6 615 aa21.08■□□□□ 0.96
TNFRSF1A-213ENST00000540022 ATP8B4Q8TF62 1192 aa21.08■□□□□ 0.96
TNFRSF1A-213ENST00000540022 BBXQ8WY36 941 aaPredicted RBP21.08■□□□□ 0.96
TNFRSF1A-213ENST00000540022 KAT2BQ92831 832 aa21.08■□□□□ 0.96
TNFRSF1A-213ENST00000540022 PAWRQ96IZ0 340 aaKnown RBP21.08■□□□□ 0.96
TNFRSF1A-213ENST00000540022 DNAH12Q6ZR08 3092 aa21.07■□□□□ 0.96
TNFRSF1A-213ENST00000540022 ARHGEF35A5YM69 484 aa21.07■□□□□ 0.96
TNFRSF1A-213ENST00000540022 MYMKA6NI61 221 aa21.07■□□□□ 0.96
TNFRSF1A-213ENST00000540022 CYP11B2P19099 503 aa21.07■□□□□ 0.96
TNFRSF1A-213ENST00000540022 PURAQ00577 322 aaKnown RBP21.07■□□□□ 0.96
TNFRSF1A-213ENST00000540022 PNOCQ13519 176 aa21.07■□□□□ 0.96
TNFRSF1A-213ENST00000540022 XKR9Q5GH70 373 aa21.07■□□□□ 0.96
TNFRSF1A-213ENST00000540022 CCSAPQ6IQ19 270 aaPredicted RBP21.07■□□□□ 0.96
TNFRSF1A-213ENST00000540022 GPBP1Q86WP2 473 aa21.07■□□□□ 0.96
TNFRSF1A-213ENST00000540022 SYAP1Q96A49 352 aaPredicted RBP21.07■□□□□ 0.96
TNFRSF1A-213ENST00000540022 CCDC34Q96HJ3 373 aa21.07■□□□□ 0.96
TNFRSF1A-213ENST00000540022 FAM167AQ96KS9 214 aa21.07■□□□□ 0.96
TNFRSF1A-213ENST00000540022 NIFKQ9BYG3 293 aaKnown RBP21.07■□□□□ 0.96
TNFRSF1A-213ENST00000540022 BLZF1Q9H2G9 400 aa21.07■□□□□ 0.96
TNFRSF1A-213ENST00000540022 NRBP2Q9NSY0 501 aa21.07■□□□□ 0.96
TNFRSF1A-213ENST00000540022 ZNF215Q9UL58 517 aaPredicted RBP21.07■□□□□ 0.96
TNFRSF1A-213ENST00000540022 CUL4BQ13620 913 aa21.06■□□□□ 0.96
TNFRSF1A-213ENST00000540022 ARSHQ5FYA8 562 aa21.06■□□□□ 0.96
TNFRSF1A-213ENST00000540022 CEP170P1Q96L14 293 aa21.06■□□□□ 0.96
TNFRSF1A-213ENST00000540022 RUSC1Q9BVN2 902 aa21.06■□□□□ 0.96
TNFRSF1A-213ENST00000540022 TRIM9Q9C026 710 aa21.06■□□□□ 0.96
TNFRSF1A-213ENST00000540022 CYP26B1Q9NR63 512 aa21.06■□□□□ 0.96
TNFRSF1A-213ENST00000540022 TRPC6Q9Y210 931 aa21.06■□□□□ 0.96
TNFRSF1A-213ENST00000540022 GTPBP6O43824 516 aaPredicted RBP21.05■□□□□ 0.96
TNFRSF1A-213ENST00000540022 ZEB2O60315 1214 aa21.05■□□□□ 0.96
TNFRSF1A-213ENST00000540022 KPNA6O60684 536 aa21.05■□□□□ 0.96
TNFRSF1A-213ENST00000540022 AMPD3Q01432 767 aa21.05■□□□□ 0.96
TNFRSF1A-213ENST00000540022 TARBP2Q15633 366 aaKnown RBP21.05■□□□□ 0.96
TNFRSF1A-213ENST00000540022 KCNA10Q16322 511 aa21.05■□□□□ 0.96
TNFRSF1A-213ENST00000540022 MTERF2Q49AM1 385 aa21.05■□□□□ 0.96
TNFRSF1A-213ENST00000540022 RINT1Q6NUQ1 792 aa21.05■□□□□ 0.96
TNFRSF1A-213ENST00000540022 CXCL17Q6UXB2 119 aa21.05■□□□□ 0.96
TNFRSF1A-213ENST00000540022 RNF180Q86T96 592 aa21.05■□□□□ 0.96
TNFRSF1A-213ENST00000540022 CEP89Q96ST8 783 aa21.05■□□□□ 0.96
TNFRSF1A-213ENST00000540022 C7orf25Q9BPX7 421 aa21.05■□□□□ 0.96
TNFRSF1A-213ENST00000540022 HTATIP2Q9BUP3 242 aa21.05■□□□□ 0.96
TNFRSF1A-213ENST00000540022 HOOK1Q9UJC3 728 aaKnown RBP21.05■□□□□ 0.96
TNFRSF1A-213ENST00000540022 HAS3O00219 553 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 HBP1O60381 514 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 ASGR1P07306 291 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 DPYDQ12882 1025 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 PADI6Q6TGC4 694 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 C1orf186Q6ZWK4 172 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 DYMQ7RTS9 669 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 NECAB2Q7Z6G3 386 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 DDX12PQ92771 950 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 DPF3Q92784 378 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 CCDC43Q96MW1 224 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 PCDHA5Q9Y5H7 936 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 NPHP3-ACAD11A0A0J9YXS1 232 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 USO1O60763 962 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 INSRRP14616 1297 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 PSEN2P49810 448 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 RAD51AP2Q09MP3 1159 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 MFSD10Q14728 455 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 KIAA0753Q2KHM9 967 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 RBM43Q6ZSC3 357 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 PCSK9Q8NBP7 692 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 MTG1Q9BT17 334 aaPredicted RBP21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 LRRC27Q9C0I9 530 aa21.04■□□□□ 0.96
TNFRSF1A-213ENST00000540022 ZBTB42B2RXF5 422 aa21.03■□□□□ 0.96
TNFRSF1A-213ENST00000540022 MYL1P05976 194 aa21.03■□□□□ 0.96
TNFRSF1A-213ENST00000540022 CHMP4BP1P59074 171 aa21.03■□□□□ 0.96
TNFRSF1A-213ENST00000540022 CACNB1Q02641 598 aaPredicted RBP21.03■□□□□ 0.96
TNFRSF1A-213ENST00000540022 PPP1R13LQ8WUF5 828 aa21.03■□□□□ 0.96
TNFRSF1A-213ENST00000540022 DNAJC19Q96DA6 116 aa21.03■□□□□ 0.96
TNFRSF1A-213ENST00000540022 BMP2KQ9NSY1 1161 aaPredicted RBP21.03■□□□□ 0.96
TNFRSF1A-213ENST00000540022 KIAA1468Q9P260 1216 aa21.03■□□□□ 0.96
TNFRSF1A-213ENST00000540022 GIT2Q14161 759 aa21.02■□□□□ 0.96
TNFRSF1A-213ENST00000540022 CNNM4Q6P4Q7 775 aa21.02■□□□□ 0.96
TNFRSF1A-213ENST00000540022 ARRDC4Q8NCT1 418 aa21.02■□□□□ 0.96
TNFRSF1A-213ENST00000540022 SPATA20Q8TB22 786 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms