RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 POLR1AO95602 1720 aaPredicted RBP7.32□□□□□ -1.24
MRE11-209ENST00000540013 PRRT4C9JH25 899 aa7.31□□□□□ -1.24
MRE11-209ENST00000540013 ABLIM1O14639 778 aa7.31□□□□□ -1.24
MRE11-209ENST00000540013 TCERG1O14776 1098 aaKnown RBP7.31□□□□□ -1.24
MRE11-209ENST00000540013 PRODHO43272 600 aa7.31□□□□□ -1.24
MRE11-209ENST00000540013 NPTXRO95502 500 aa7.31□□□□□ -1.24
MRE11-209ENST00000540013 SRGNP10124 158 aa7.31□□□□□ -1.24
MRE11-209ENST00000540013 PABPC1P11940 636 aaKnown RBP7.31□□□□□ -1.24
MRE11-209ENST00000540013 LTBRP36941 435 aa7.31□□□□□ -1.24
MRE11-209ENST00000540013 SARSP49591 514 aaKnown RBP7.31□□□□□ -1.24
MRE11-209ENST00000540013 DHCR24Q15392 516 aa7.31□□□□□ -1.24
MRE11-209ENST00000540013 CNNM4Q6P4Q7 775 aa7.31□□□□□ -1.24
MRE11-209ENST00000540013 TOGARAM2Q6ZUX3 1019 aa7.31□□□□□ -1.24
MRE11-209ENST00000540013 LHFPL2Q6ZUX7 228 aa7.31□□□□□ -1.24
MRE11-209ENST00000540013 AHI1Q8N157 1196 aa7.31□□□□□ -1.24
MRE11-209ENST00000540013 SDR16C5Q8N3Y7 309 aa7.31□□□□□ -1.24
MRE11-209ENST00000540013 TMEM145Q8NBT3 493 aa7.31□□□□□ -1.24
MRE11-209ENST00000540013 LEO1Q8WVC0 666 aaPredicted RBP7.31□□□□□ -1.24
MRE11-209ENST00000540013 SNRNP27Q8WVK2 155 aaKnown RBP7.31□□□□□ -1.24
MRE11-209ENST00000540013 DDX1Q92499 740 aaKnown RBP7.31□□□□□ -1.24
MRE11-209ENST00000540013 SHISA4Q96DD7 197 aa7.31□□□□□ -1.24
MRE11-209ENST00000540013 LUC7LQ9NQ29 371 aaKnown RBP7.31□□□□□ -1.24
MRE11-209ENST00000540013 PRDM15P57071 1507 aaPredicted RBP7.31□□□□□ -1.24
MRE11-209ENST00000540013 ANKRD30AQ9BXX3 1397 aa7.31□□□□□ -1.24
MRE11-209ENST00000540013 DEPDC5O75140 1603 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 SPATA31D1Q6ZQQ2 1576 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 OR14I1A6ND48 311 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 GABRDO14764 452 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 RNASEH2AO75792 299 aaKnown RBP7.3□□□□□ -1.24
MRE11-209ENST00000540013 MPOP05164 745 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 CALRP27797 417 aaKnown RBP7.3□□□□□ -1.24
MRE11-209ENST00000540013 TCIRG1Q13488 830 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 STAT4Q14765 748 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 KRT72Q14CN4 511 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 SLC35F1Q5T1Q4 408 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 RSPO2Q6UXX9 243 aaPredicted RBP7.3□□□□□ -1.24
MRE11-209ENST00000540013 CPNE8Q86YQ8 564 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 CCDC89Q8N998 374 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 TIFAQ96CG3 184 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 CLUHP3Q96NS8 147 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 SELENOOQ9BVL4 669 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 MRPL4Q9BYD3 311 aaKnown RBP7.3□□□□□ -1.24
MRE11-209ENST00000540013 RRP7BPQ9NSQ0 103 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.3□□□□□ -1.24
MRE11-209ENST00000540013 TRHDEQ9UKU6 1024 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 ADGRL2O95490 1459 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 ERVK-7P63135 1459 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 NLRP1Q9C000 1473 aa7.3□□□□□ -1.24
MRE11-209ENST00000540013 ZNF503-AS2A6NEH8 195 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 LRRC10BA6NIK2 292 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 HRKO00198 91 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 DLX3O60479 287 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 APPP05067 770 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 SERPINB3P29508 390 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 GRIA2P42262 883 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 HALP42357 657 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 ZNF280AP59817 542 aaPredicted RBP7.29□□□□□ -1.24
MRE11-209ENST00000540013 ERVFRD-1P60508 538 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 SUMO1P63165 101 aaKnown RBP7.29□□□□□ -1.24
MRE11-209ENST00000540013 NR1I3Q14994 352 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 SYDE2Q5VT97 1194 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 RINLQ6ZS11 566 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 IFNL2Q8IZJ0 200 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 LZTR1Q8N653 840 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 KREMEN2Q8NCW0 462 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 USP33Q8TEY7 942 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 DCAF4Q8WV16 495 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 ATXN2LQ8WWM7 1075 aaKnown RBP7.29□□□□□ -1.24
MRE11-209ENST00000540013 TRMT2BQ96GJ1 504 aaKnown RBP7.29□□□□□ -1.24
MRE11-209ENST00000540013 C1orf159Q96HA4 380 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 EXOC2Q96KP1 924 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 ZFYVE21Q9BQ24 234 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 DHRS4Q9BTZ2 278 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 TRIM8Q9BZR9 551 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 PLCB1Q9NQ66 1216 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 RNF114Q9Y508 228 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 TIMM13Q9Y5L4 95 aaPredicted RBP7.29□□□□□ -1.24
MRE11-209ENST00000540013 UGGT1Q9NYU2 1555 aa7.29□□□□□ -1.24
MRE11-209ENST00000540013 LTBP4Q8N2S1 1624 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 TRBV23-1A0A0A0MS06 115 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 C7orf72A4D263 438 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 FAM83GA6ND36 823 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 FBXO21O94952 628 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 TYRP1P17643 537 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 SDSP20132 328 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 POU3F2P20265 443 aaPredicted RBP7.28□□□□□ -1.24
MRE11-209ENST00000540013 GEMIN4P57678 1058 aaKnown RBP7.28□□□□□ -1.24
MRE11-209ENST00000540013 RPL11P62913 178 aaKnown RBP7.28□□□□□ -1.24
MRE11-209ENST00000540013 MVKQ03426 396 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 GBX1Q14549 363 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 SF1Q15637 639 aaKnown RBP7.28□□□□□ -1.24
MRE11-209ENST00000540013 PRSS53Q2L4Q9 553 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 MINDY4Q4G0A6 757 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 ADGRF1Q5T601 910 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 FOXB2Q5VYV0 432 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 ZNF354CQ86Y25 554 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 PPHLN1Q8NEY8 458 aaKnown RBP7.28□□□□□ -1.24
MRE11-209ENST00000540013 GJA10Q969M2 543 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 SCLT1Q96NL6 688 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 EPB41L4BQ9H329 900 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms