RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 FXR2P51116 673 aaKnown RBP eCLIP15.05■□□□□ -08e-7■■■■□ 25.7
PRPF19-204ENST00000539960 CYP4A11Q02928 519 aa15.05■□□□□ -0
PRPF19-204ENST00000539960 RESTQ13127 1097 aa15.05■□□□□ -0
PRPF19-204ENST00000539960 TMEM266Q2M3C6 531 aa15.05■□□□□ -0
PRPF19-204ENST00000539960 RASIP1Q5U651 963 aa15.05■□□□□ -0
PRPF19-204ENST00000539960 IER5Q5VY09 327 aa15.05■□□□□ -0
PRPF19-204ENST00000539960 OTUD6AQ7L8S5 288 aa15.05■□□□□ -0
PRPF19-204ENST00000539960 SPRYD3Q8NCJ5 442 aa15.05■□□□□ -0
PRPF19-204ENST00000539960 NEK9Q8TD19 979 aa15.05■□□□□ -0
PRPF19-204ENST00000539960 RNPC3Q96LT9 517 aaKnown RBP15.05■□□□□ -0
PRPF19-204ENST00000539960 CEP89Q96ST8 783 aa15.05■□□□□ -0
PRPF19-204ENST00000539960 LXNQ9BS40 222 aa15.05■□□□□ -0
PRPF19-204ENST00000539960 SEPT9Q9UHD8 586 aaPredicted RBP15.05■□□□□ -0
PRPF19-204ENST00000539960 ZBTB39O15060 712 aa15.04■□□□□ -0
PRPF19-204ENST00000539960 LYPLA2O95372 231 aa15.04■□□□□ -0
PRPF19-204ENST00000539960 CTSHP09668 335 aa15.04■□□□□ -0
PRPF19-204ENST00000539960 MRPS6P82932 125 aaKnown RBP15.04■□□□□ -0
PRPF19-204ENST00000539960 ATP2C1P98194 919 aaPredicted RBP15.04■□□□□ -0
PRPF19-204ENST00000539960 TBC1D8BQ0IIM8 1120 aa15.04■□□□□ -0
PRPF19-204ENST00000539960 IL17AQ16552 155 aa15.04■□□□□ -0
PRPF19-204ENST00000539960 LRIT3Q3SXY7 679 aa15.04■□□□□ -0
PRPF19-204ENST00000539960 MTERF2Q49AM1 385 aa15.04■□□□□ -0
PRPF19-204ENST00000539960 EFCAB12Q6NXP0 572 aa15.04■□□□□ -0
PRPF19-204ENST00000539960 DTHD1Q6ZMT9 781 aa15.04■□□□□ -0
PRPF19-204ENST00000539960 OTOP2Q7RTS6 562 aa15.04■□□□□ -0
PRPF19-204ENST00000539960 METTL13Q8N6R0 699 aa15.04■□□□□ -0
PRPF19-204ENST00000539960 POLR3CQ9BUI4 534 aaPredicted RBP15.04■□□□□ -0
PRPF19-204ENST00000539960 ZSCAN16Q9H4T2 348 aaPredicted RBP15.04■□□□□ -0
PRPF19-204ENST00000539960 TUFT1Q9NNX1 390 aa15.04■□□□□ -0
PRPF19-204ENST00000539960 TRIOBPQ9H2D6 2365 aa15.04■□□□□ -0
PRPF19-204ENST00000539960 KAT6AQ92794 2004 aa15.04■□□□□ -0
PRPF19-204ENST00000539960 SPATA31C1P0DKV0 1188 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 ACTN1P12814 892 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 XRCC6P12956 609 aaKnown RBP eCLIP15.03■□□□□ -0
PRPF19-204ENST00000539960 TMOD1P28289 359 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 YWHABP31946 246 aaKnown RBP15.03■□□□□ -0
PRPF19-204ENST00000539960 NPEPPSP55786 919 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 MGAT3Q09327 533 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 ARL6IP4Q66PJ3 421 aaKnown RBP15.03■□□□□ -0
PRPF19-204ENST00000539960 PLA2G4FQ68DD2 849 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 CATSPER3Q86XQ3 398 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 IGSF22Q8N9C0 903 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 ZNF579Q8NAF0 562 aaKnown RBP15.03■□□□□ -0
PRPF19-204ENST00000539960 ERMNQ8TAM6 284 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 CEP170P1Q96L14 293 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 SH2D3AQ9BRG2 576 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 CELF4Q9BZC1 486 aaKnown RBP15.03■□□□□ -0
PRPF19-204ENST00000539960 OSBPL7Q9BZF2 842 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 RAB34Q9BZG1 259 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 MTIF3Q9H2K0 278 aaKnown RBP15.03■□□□□ -0
PRPF19-204ENST00000539960 SUGCTQ9HAC7 445 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 CYP26B1Q9NR63 512 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 ANKEF1Q9NU02 776 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 LRWD1Q9UFC0 647 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 PPME1Q9Y570 386 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 CDY2AQ9Y6F7 541 aa15.03■□□□□ -0
PRPF19-204ENST00000539960 IGKV6-21A0A0C4DH24 114 aa15.02■□□□□ -0
PRPF19-204ENST00000539960 M0QZ92 97 aa15.02■□□□□ -0
PRPF19-204ENST00000539960 MAFO75444 373 aaPredicted RBP15.02■□□□□ -0
PRPF19-204ENST00000539960 MED24O75448 989 aa15.02■□□□□ -0
PRPF19-204ENST00000539960 BMP15O95972 392 aa15.02■□□□□ -0
PRPF19-204ENST00000539960 RPA1P27694 616 aa15.02■□□□□ -0
PRPF19-204ENST00000539960 TMEM62Q0P6H9 643 aa15.02■□□□□ -0
PRPF19-204ENST00000539960 BECN1Q14457 450 aa15.02■□□□□ -0
PRPF19-204ENST00000539960 SF3A1Q15459 793 aaKnown RBP15.02■□□□□ -0
PRPF19-204ENST00000539960 PLEKHG4Q58EX7 1191 aa15.02■□□□□ -0
PRPF19-204ENST00000539960 XKR9Q5GH70 373 aa15.02■□□□□ -0
PRPF19-204ENST00000539960 CNKSR3Q6P9H4 555 aa15.02■□□□□ -0
PRPF19-204ENST00000539960 EXOC8Q8IYI6 725 aa15.02■□□□□ -0
PRPF19-204ENST00000539960 LINC01465Q8N7H1 131 aa15.02■□□□□ -0
PRPF19-204ENST00000539960 DBF4BQ8NFT6 615 aa15.02■□□□□ -0
PRPF19-204ENST00000539960 JPH2Q9BR39 696 aaPredicted RBP15.02■□□□□ -0
PRPF19-204ENST00000539960 CXXC1Q9P0U4 656 aaPredicted RBP15.02■□□□□ -0
PRPF19-204ENST00000539960 TRPV2Q9Y5S1 764 aa15.02■□□□□ -0
PRPF19-204ENST00000539960 STK24Q9Y6E0 443 aa15.02■□□□□ -0
PRPF19-204ENST00000539960 SQORQ9Y6N5 450 aa15.02■□□□□ -0
PRPF19-204ENST00000539960 MYH9P35579 1960 aaKnown RBP15.02□□□□□ -0.01
PRPF19-204ENST00000539960 KDM3AQ9Y4C1 1321 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 A0A087WWV3 80 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.01□□□□□ -0.01
PRPF19-204ENST00000539960 ABHD14A-ACY1A0A1B0GW23 586 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.01□□□□□ -0.01
PRPF19-204ENST00000539960 MUTP22033 750 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 DNM2P50570 870 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 CLCN3P51790 818 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 MKRN4PQ13434 485 aaPredicted RBP15.01□□□□□ -0.01
PRPF19-204ENST00000539960 IKBKEQ14164 716 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 TCTN1Q2MV58 587 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 FBXO47Q5MNV8 452 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 FAM173BQ6P4H8 233 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 ZNF710Q8N1W2 664 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 LRRC71Q8N4P6 559 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 PIGOQ8TEQ8 1089 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 SEPT8Q92599 483 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 NACC1Q96RE7 527 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 CDHR5Q9HBB8 845 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 CLIC4Q9Y696 253 aa15.01□□□□□ -0.01
PRPF19-204ENST00000539960 RBAK-RBAKDNI3L0D1 243 aa15□□□□□ -0.01
PRPF19-204ENST00000539960 GPR32O75388 356 aa15□□□□□ -0.01
PRPF19-204ENST00000539960 BAIAP3O94812 1187 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms