RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 WDR64B1ANS9 1081 aa17.32■□□□□ 0.36
UBE3B-211ENST00000539843 MAGEB2O15479 319 aa17.32■□□□□ 0.36
UBE3B-211ENST00000539843 IFNAR1P17181 557 aa17.32■□□□□ 0.36
UBE3B-211ENST00000539843 IBSPP21815 317 aaPredicted RBP17.32■□□□□ 0.36
UBE3B-211ENST00000539843 NLRP5P59047 1200 aa17.32■□□□□ 0.36
UBE3B-211ENST00000539843 TMEM31Q5JXX7 168 aa17.32■□□□□ 0.36
UBE3B-211ENST00000539843 SPOUT1Q5T280 376 aaKnown RBP17.32■□□□□ 0.36
UBE3B-211ENST00000539843 GJD3Q8N144 294 aa17.32■□□□□ 0.36
UBE3B-211ENST00000539843 P2RX5Q93086 422 aa17.32■□□□□ 0.36
UBE3B-211ENST00000539843 RC3H2Q9HBD1 1191 aaKnown RBP17.32■□□□□ 0.36
UBE3B-211ENST00000539843 SH3GLB2Q9NR46 395 aa17.32■□□□□ 0.36
UBE3B-211ENST00000539843 HCN4Q9Y3Q4 1203 aa17.32■□□□□ 0.36
UBE3B-211ENST00000539843 RALGAPA2Q2PPJ7 1873 aa17.31■□□□□ 0.36
UBE3B-211ENST00000539843 H3BQ06 376 aaPredicted RBP17.31■□□□□ 0.36
UBE3B-211ENST00000539843 MMP1P03956 469 aa17.31■□□□□ 0.36
UBE3B-211ENST00000539843 NEFLP07196 543 aa17.31■□□□□ 0.36
UBE3B-211ENST00000539843 SARSP49591 514 aaKnown RBP17.31■□□□□ 0.36
UBE3B-211ENST00000539843 SSRP1Q08945 709 aaKnown RBP17.31■□□□□ 0.36
UBE3B-211ENST00000539843 PAN2Q504Q3 1202 aaKnown RBP17.31■□□□□ 0.36
UBE3B-211ENST00000539843 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.31■□□□□ 0.36
UBE3B-211ENST00000539843 NEK9Q8TD19 979 aa17.31■□□□□ 0.36
UBE3B-211ENST00000539843 NRBP2Q9NSY0 501 aa17.31■□□□□ 0.36
UBE3B-211ENST00000539843 GABBR1Q9UBS5 961 aa17.31■□□□□ 0.36
UBE3B-211ENST00000539843 CYP46A1Q9Y6A2 500 aa17.31■□□□□ 0.36
UBE3B-211ENST00000539843 TRANK1O15050 2925 aa17.31■□□□□ 0.36
UBE3B-211ENST00000539843 DHX15O43143 795 aaKnown RBP17.3■□□□□ 0.36
UBE3B-211ENST00000539843 GAS7O60861 476 aa17.3■□□□□ 0.36
UBE3B-211ENST00000539843 SFNP31947 248 aa17.3■□□□□ 0.36
UBE3B-211ENST00000539843 CIITAP33076 1130 aa17.3■□□□□ 0.36
UBE3B-211ENST00000539843 USP11P51784 963 aa17.3■□□□□ 0.36
UBE3B-211ENST00000539843 JAK3P52333 1124 aa17.3■□□□□ 0.36
UBE3B-211ENST00000539843 CRYBB1P53674 252 aaPredicted RBP17.3■□□□□ 0.36
UBE3B-211ENST00000539843 CCT2P78371 535 aaKnown RBP17.3■□□□□ 0.36
UBE3B-211ENST00000539843 PKN1Q16512 942 aa17.3■□□□□ 0.36
UBE3B-211ENST00000539843 TMEM266Q2M3C6 531 aa17.3■□□□□ 0.36
UBE3B-211ENST00000539843 TRMT1LQ7Z2T5 733 aaKnown RBP17.3■□□□□ 0.36
UBE3B-211ENST00000539843 FAM178BQ8IXR5 827 aa17.3■□□□□ 0.36
UBE3B-211ENST00000539843 CRYGNQ8WXF5 182 aa17.3■□□□□ 0.36
UBE3B-211ENST00000539843 SCLT1Q96NL6 688 aa17.3■□□□□ 0.36
UBE3B-211ENST00000539843 TEKT3Q9BXF9 490 aa17.3■□□□□ 0.36
UBE3B-211ENST00000539843 AGXT2Q9BYV1 514 aa17.3■□□□□ 0.36
UBE3B-211ENST00000539843 VPS54Q9P1Q0 977 aa17.3■□□□□ 0.36
UBE3B-211ENST00000539843 PRKAG3Q9UGI9 489 aa17.3■□□□□ 0.36
UBE3B-211ENST00000539843 PCDHB12Q9Y5F1 795 aa17.3■□□□□ 0.36
UBE3B-211ENST00000539843 MAFBQ9Y5Q3 323 aaPredicted RBP17.3■□□□□ 0.36
UBE3B-211ENST00000539843 MRPL42Q9Y6G3 142 aaKnown RBP17.3■□□□□ 0.36
UBE3B-211ENST00000539843 FSD2A1L4K1 749 aa17.29■□□□□ 0.36
UBE3B-211ENST00000539843 GRXCR2A6NFK2 248 aa17.29■□□□□ 0.36
UBE3B-211ENST00000539843 GRM6O15303 877 aa17.29■□□□□ 0.36
UBE3B-211ENST00000539843 CSPG5O95196 566 aa17.29■□□□□ 0.36
UBE3B-211ENST00000539843 ALADP13716 330 aa17.29■□□□□ 0.36
UBE3B-211ENST00000539843 IL9P15248 144 aa17.29■□□□□ 0.36
UBE3B-211ENST00000539843 CSPP1Q1MSJ5 1256 aa17.29■□□□□ 0.36
UBE3B-211ENST00000539843 SLC24A5Q71RS6 500 aa17.29■□□□□ 0.36
UBE3B-211ENST00000539843 RUFY3Q7L099 469 aa17.29■□□□□ 0.36
UBE3B-211ENST00000539843 KIAA0319LQ8IZA0 1049 aa17.29■□□□□ 0.36
UBE3B-211ENST00000539843 FAM177A1Q8N128 213 aaPredicted RBP17.29■□□□□ 0.36
UBE3B-211ENST00000539843 RASGRP4Q8TDF6 673 aa17.29■□□□□ 0.36
UBE3B-211ENST00000539843 LINC01599Q8WXQ3 324 aa17.29■□□□□ 0.36
UBE3B-211ENST00000539843 POP1Q99575 1024 aaKnown RBP17.29■□□□□ 0.36
UBE3B-211ENST00000539843 ST3GAL5Q9UNP4 418 aa17.29■□□□□ 0.36
UBE3B-211ENST00000539843 AKT3Q9Y243 479 aa17.29■□□□□ 0.36
UBE3B-211ENST00000539843 HOXA2O43364 376 aa17.28■□□□□ 0.36
UBE3B-211ENST00000539843 CDKL5O76039 1030 aa17.28■□□□□ 0.36
UBE3B-211ENST00000539843 DEXIO95424 95 aa17.28■□□□□ 0.36
UBE3B-211ENST00000539843 C22orf31O95567 290 aa17.28■□□□□ 0.36
UBE3B-211ENST00000539843 ZSCAN20P17040 1043 aaPredicted RBP17.28■□□□□ 0.36
UBE3B-211ENST00000539843 PDIA3P30101 505 aaKnown RBP17.28■□□□□ 0.36
UBE3B-211ENST00000539843 KIZQ2M2Z5 673 aa17.28■□□□□ 0.36
UBE3B-211ENST00000539843 LRCH2Q5VUJ6 765 aa17.28■□□□□ 0.36
UBE3B-211ENST00000539843 UIMC1Q96RL1 719 aa17.28■□□□□ 0.36
UBE3B-211ENST00000539843 RIT2Q99578 217 aa17.28■□□□□ 0.36
UBE3B-211ENST00000539843 OSMRQ99650 979 aa17.28■□□□□ 0.36
UBE3B-211ENST00000539843 ADAM2Q99965 735 aa17.28■□□□□ 0.36
UBE3B-211ENST00000539843 UPF3BQ9BZI7 483 aaKnown RBP17.28■□□□□ 0.36
UBE3B-211ENST00000539843 ATP6V0A4Q9HBG4 840 aa17.28■□□□□ 0.36
UBE3B-211ENST00000539843 ERVK-5Q9HDB9 667 aa17.28■□□□□ 0.36
UBE3B-211ENST00000539843 ALG13Q9NP73 1137 aaKnown RBP17.28■□□□□ 0.36
UBE3B-211ENST00000539843 DISC1Q9NRI5 854 aa17.28■□□□□ 0.36
UBE3B-211ENST00000539843 RGS18Q9NS28 235 aa17.28■□□□□ 0.36
UBE3B-211ENST00000539843 PLAGL2Q9UPG8 496 aa17.28■□□□□ 0.36
UBE3B-211ENST00000539843 NOC2LQ9Y3T9 749 aaKnown RBP17.28■□□□□ 0.36
UBE3B-211ENST00000539843 BDP1A6H8Y1 2624 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 NLRC5Q86WI3 1866 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 TTC3P53804 2025 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 RBAK-RBAKDNI3L0D1 243 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 CHMP2AO43633 222 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 OATP04181 439 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 XBP1P17861 261 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 NDUFV1P49821 464 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 EVCP57679 992 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 UBE3AQ05086 875 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 NTRK3Q16288 839 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 GALNT17Q6IS24 598 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 RTN4RL1Q86UN2 441 aaPredicted RBP17.27■□□□□ 0.36
UBE3B-211ENST00000539843 ABI1Q8IZP0 508 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 RDM1Q8NG50 284 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 PPP1R16BQ96T49 567 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 IGFLR1Q9H665 355 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 EPHX3Q9H6B9 360 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms