RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 GNEQ9Y223 722 aaKnown RBP11.86□□□□□ -0.51
LEMD3-202ENST00000539442 KLRC4O43908 158 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 ZNF862O60290 1169 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 RHOBTB3O94955 611 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 HMGCRP04035 888 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 HOXD8P13378 290 aaPredicted RBP11.85□□□□□ -0.51
LEMD3-202ENST00000539442 CASP1P29466 404 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 STAT5BP51692 787 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 NLRP12P59046 1061 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 PRKCEQ02156 737 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 MORC3Q14149 939 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 DHX8Q14562 1220 aaKnown RBP11.85□□□□□ -0.51
LEMD3-202ENST00000539442 PRAMEF19Q5SWL8 479 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 RAET1EQ8TD07 263 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 DNAJC19Q96DA6 116 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 CCDC43Q96MW1 224 aaKnown RBP11.85□□□□□ -0.51
LEMD3-202ENST00000539442 PCYT2Q99447 389 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 TIPINQ9BVW5 301 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 SMARCAD1Q9H4L7 1026 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 TELO2Q9Y4R8 837 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 PPME1Q9Y570 386 aa11.85□□□□□ -0.51
LEMD3-202ENST00000539442 LOXHD1Q8IVV2 1947 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 BIN1O00499 593 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 ADCY3O60266 1144 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 PPFIA4O75335 1185 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 STBD1O95210 358 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 OATP04181 439 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 KRT18P05783 430 aaKnown RBP11.84□□□□□ -0.51
LEMD3-202ENST00000539442 MMP3P08254 477 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 HOXB1P14653 301 aaPredicted RBP11.84□□□□□ -0.51
LEMD3-202ENST00000539442 GUCY2CP25092 1073 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 GSE1Q14687 1217 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 KMT5BQ4FZB7 885 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 BRDTQ58F21 947 aaPredicted RBP11.84□□□□□ -0.51
LEMD3-202ENST00000539442 ARSHQ5FYA8 562 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 CT47A1Q5JQC4 288 aaPredicted RBP11.84□□□□□ -0.51
LEMD3-202ENST00000539442 TMEM63BQ5T3F8 832 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 GJC2Q5T442 439 aaPredicted RBP11.84□□□□□ -0.51
LEMD3-202ENST00000539442 RINT1Q6NUQ1 792 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 C1orf186Q6ZWK4 172 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 ANO5Q75V66 913 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 TLK2Q86UE8 772 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 CCDC65Q8IXS2 484 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 DNAJC5GQ8N7S2 189 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 AFG1LQ8WV93 481 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 GLG1Q92896 1179 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 NRBP2Q9NSY0 501 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 EXOC1Q9NV70 894 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 PLA2G2EQ9NZK7 142 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 DACH1Q9UI36 760 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 ODF2LQ9ULJ1 636 aa11.84□□□□□ -0.51
LEMD3-202ENST00000539442 FRMD3A2A2Y4 597 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 A6NJR5 290 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 SEPT4O43236 478 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 ADCY6O43306 1168 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 DUSP11O75319 330 aaKnown RBP11.83□□□□□ -0.52
LEMD3-202ENST00000539442 LGALS2P05162 132 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 ATP4AP20648 1035 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 PPP1R2P41236 205 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 CPT1AP50416 773 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 CACNB2Q08289 660 aaPredicted RBP11.83□□□□□ -0.52
LEMD3-202ENST00000539442 PSMD2Q13200 908 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 GIT2Q14161 759 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 DGKDQ16760 1214 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 XKR9Q5GH70 373 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 MAP3K21Q5TCX8 1036 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 ZNF658Q5TYW1 1059 aaPredicted RBP11.83□□□□□ -0.52
LEMD3-202ENST00000539442 PADI6Q6TGC4 694 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 DYMQ7RTS9 669 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 MLKLQ8NB16 471 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 TRPV1Q8NER1 839 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 ATP8B4Q8TF62 1192 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 BBXQ8WY36 941 aaPredicted RBP11.83□□□□□ -0.52
LEMD3-202ENST00000539442 CEP170P1Q96L14 293 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 RUSC1Q9BVN2 902 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 NIFKQ9BYG3 293 aaKnown RBP11.83□□□□□ -0.52
LEMD3-202ENST00000539442 NAT10Q9H0A0 1025 aaKnown RBP11.83□□□□□ -0.52
LEMD3-202ENST00000539442 AP5M1Q9H0R1 490 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 ERAP1Q9NZ08 941 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 SEPT9Q9UHD8 586 aaPredicted RBP11.83□□□□□ -0.52
LEMD3-202ENST00000539442 ZNF215Q9UL58 517 aaPredicted RBP11.83□□□□□ -0.52
LEMD3-202ENST00000539442 DOCK5Q9H7D0 1870 aa11.83□□□□□ -0.52
LEMD3-202ENST00000539442 A0A087WWV3 80 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 ZBTB39O15060 712 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 DYNC1LI2O43237 492 aaPredicted RBP11.82□□□□□ -0.52
LEMD3-202ENST00000539442 TBCAO75347 108 aaKnown RBP11.82□□□□□ -0.52
LEMD3-202ENST00000539442 DGAT1O75907 488 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 IDEP14735 1019 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 ELNP15502 786 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 GAP43P17677 238 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 BMP6P22004 513 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 NKX3-2P78367 333 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 EHHADHQ08426 723 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 DPCR1Q3MIW9 517 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 ANO6Q4KMQ2 910 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 COBLL1Q53SF7 1204 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 UTP14CQ5TAP6 766 aaKnown RBP11.82□□□□□ -0.52
LEMD3-202ENST00000539442 PLA2G4FQ68DD2 849 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 GAS2L3Q86XJ1 694 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 FAM200AQ8TCP9 573 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms