RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ALS2CLQ60I27 953 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.68■□□□□ 0.1
CACNB1-206ENST00000539338 CPSF2Q9P2I0 782 aaKnown RBP15.68■□□□□ 0.1
CACNB1-206ENST00000539338 NBPF26B4DH59 902 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 ITKQ08881 620 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 TERF2Q15554 542 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 NBPF10Q6P3W6 841 aaKnown RBP15.68■□□□□ 0.1
CACNB1-206ENST00000539338 NEK9Q8TD19 979 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 ISCA1Q9BUE6 129 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 CPDO75976 1380 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 SLC8A1P32418 973 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 GTF2A2P52657 109 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 OSTNP61366 133 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 FAM133BQ5BKY9 247 aaKnown RBP15.67■□□□□ 0.1
CACNB1-206ENST00000539338 ATG9AQ7Z3C6 839 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 RBM46Q8TBY0 533 aaKnown RBP15.67■□□□□ 0.1
CACNB1-206ENST00000539338 CDHR1Q96JP9 859 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 ANKRD65E5RJM6 399 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 ABL1P00519 1130 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 RPS6KA2Q15349 733 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 TSGA10IPQ3SY00 556 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 PPP4R3CPQ6ZMV5 832 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 SFR1Q86XK3 245 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 EFCAB13Q8IY85 973 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 CDHR2Q9BYE9 1310 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 FAM196BA6NMK8 535 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 HNRNPH2P55795 449 aaKnown RBP15.67■□□□□ 0.1
CACNB1-206ENST00000539338 E2F5Q15329 346 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 MARCH10Q8NA82 808 aaPredicted RBP15.67■□□□□ 0.1
CACNB1-206ENST00000539338 ANKRD36BP1Q96IX9 119 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 SPZ1Q9BXG8 430 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 TFDP1Q14186 410 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 MIS18BP1Q6P0N0 1132 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 DNAJC24Q6P3W2 148 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 EEPD1Q7L9B9 569 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 GDAP1Q8TB36 358 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 DPF2Q92785 391 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 ADGRG1Q9Y653 693 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 ZHX2Q9Y6X8 837 aa15.67■□□□□ 0.1
CACNB1-206ENST00000539338 GH2P01242 217 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 KCNA4P22459 653 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 PDE1BQ01064 536 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 EXOSC10Q01780 885 aaKnown RBP15.66■□□□□ 0.1
CACNB1-206ENST00000539338 CEP95Q96GE4 821 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 HDAC6Q9UBN7 1215 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 AKT3Q9Y243 479 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 RASGRF2O14827 1237 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 ALX1Q15699 326 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 SH2D4BQ5SQS7 431 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 CHADLQ6NUI6 762 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 HAUS2Q9NVX0 235 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 PCDHA6Q9UN73 950 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 PCDHA8Q9Y5H6 950 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 FRMD3A2A2Y4 597 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 BASP1P80723 227 aaKnown RBP15.66■□□□□ 0.1
CACNB1-206ENST00000539338 RCN2Q14257 317 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 PDZD4Q76G19 769 aaPredicted RBP15.66■□□□□ 0.1
CACNB1-206ENST00000539338 DNAJC12Q9UKB3 198 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 ADAM21Q9UKJ8 722 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 TTC26A0AVF1 554 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 ZBTB5O15062 677 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 HSPA6P17066 643 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 PEX3P56589 373 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 EMBQ6PCB8 327 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 TMED8Q6PL24 325 aaPredicted RBP15.66■□□□□ 0.1
CACNB1-206ENST00000539338 RAD54LQ92698 747 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 FAM149B1Q96BN6 582 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 CALN1Q9BXU9 219 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 ZMYND12Q9H0C1 365 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 CEP72Q9P209 647 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 KIAA1210Q9ULL0 1709 aa15.66■□□□□ 0.1
CACNB1-206ENST00000539338 LRRD1A4D1F6 860 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 NCK2O43639 380 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 MYL3P08590 195 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 RPSAP08865 295 aaKnown RBP15.65■□□□□ 0.1
CACNB1-206ENST00000539338 CYP19A1P11511 503 aaPredicted RBP15.65■□□□□ 0.1
CACNB1-206ENST00000539338 KCNF1Q9H3M0 494 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 MRPL47Q9HD33 250 aaKnown RBP15.65■□□□□ 0.1
CACNB1-206ENST00000539338 USP17L10C9JJH3 530 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 XPOTO43592 962 aaKnown RBP15.65■□□□□ 0.1
CACNB1-206ENST00000539338 MTF1Q14872 753 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 FAM160B2Q86V87 743 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 METTL16Q86W50 562 aaKnown RBP15.65■□□□□ 0.1
CACNB1-206ENST00000539338 ANKRD13AQ8IZ07 590 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 CDKL2Q92772 493 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 GBP5Q96PP8 586 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 PLAAQ9Y263 795 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 MANSC4A6NHS7 340 aaPredicted RBP15.65■□□□□ 0.1
CACNB1-206ENST00000539338 CCND2P30279 289 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 ZNF609O15014 1411 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 POTEB3A0JP26 581 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 POTECB2RU33 542 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 COASYQ13057 564 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 SLMAPQ14BN4 828 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 POTEBQ6S5H4 581 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 SGMS1Q86VZ5 419 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 SMYD2Q9NRG4 433 aa15.65■□□□□ 0.1
CACNB1-206ENST00000539338 A0A087WUV0 522 aaPredicted RBP15.64■□□□□ 0.1
CACNB1-206ENST00000539338 ACSL3O95573 720 aa15.64■□□□□ 0.1
CACNB1-206ENST00000539338 ELF1P32519 619 aa15.64■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms