RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 PLPPR4Q7Z2D5 763 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 TLK2Q86UE8 772 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 EXOC8Q8IYI6 725 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 TRIB2Q92519 343 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 CEP170P1Q96L14 293 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 DRC1Q96MC2 740 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 REEP2Q9BRK0 252 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 BCAS3Q9H6U6 928 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 SPC25Q9HBM1 224 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 ERAP1Q9NZ08 941 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 Q9Y3F1 56 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 A0A087WWV3 80 aa17.1■□□□□ 0.33
VAMP1-207ENST00000539047 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.1■□□□□ 0.33
VAMP1-207ENST00000539047 SMTNL1A8MU46 457 aa17.1■□□□□ 0.33
VAMP1-207ENST00000539047 USO1O60763 962 aaKnown RBP17.1■□□□□ 0.33
VAMP1-207ENST00000539047 LGR5O75473 907 aa17.1■□□□□ 0.33
VAMP1-207ENST00000539047 GUCY2CP25092 1073 aa17.1■□□□□ 0.33
VAMP1-207ENST00000539047 MRE11P49959 708 aa17.1■□□□□ 0.33
VAMP1-207ENST00000539047 RAD51AP2Q09MP3 1159 aa17.1■□□□□ 0.33
VAMP1-207ENST00000539047 COASYQ13057 564 aa17.1■□□□□ 0.33
VAMP1-207ENST00000539047 STXBP4Q6ZWJ1 553 aa17.1■□□□□ 0.33
VAMP1-207ENST00000539047 TRMT1LQ7Z2T5 733 aaKnown RBP17.1■□□□□ 0.33
VAMP1-207ENST00000539047 RNF214Q8ND24 703 aa17.1■□□□□ 0.33
VAMP1-207ENST00000539047 MCPH1Q8NEM0 835 aa17.1■□□□□ 0.33
VAMP1-207ENST00000539047 ZNF296Q8WUU4 475 aaPredicted RBP17.1■□□□□ 0.33
VAMP1-207ENST00000539047 AFG1LQ8WV93 481 aa17.1■□□□□ 0.33
VAMP1-207ENST00000539047 BBXQ8WY36 941 aaPredicted RBP17.1■□□□□ 0.33
VAMP1-207ENST00000539047 ANP32BQ92688 251 aaKnown RBP17.1■□□□□ 0.33
VAMP1-207ENST00000539047 BPIFA3Q9BQP9 254 aa17.1■□□□□ 0.33
VAMP1-207ENST00000539047 RUSC1Q9BVN2 902 aa17.1■□□□□ 0.33
VAMP1-207ENST00000539047 SEL1LQ9UBV2 794 aa17.1■□□□□ 0.33
VAMP1-207ENST00000539047 PSMA7O14818 248 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 KLRC4O43908 158 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 ADCY3O60266 1144 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 DGAT1O75907 488 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 CYBAP13498 195 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 CNGA1P29973 690 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 RFC5P40937 340 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 POLGP54098 1239 aaPredicted RBP17.09■□□□□ 0.33
VAMP1-207ENST00000539047 MTERF2Q49AM1 385 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 HERC4Q5GLZ8 1057 aaPredicted RBP17.09■□□□□ 0.33
VAMP1-207ENST00000539047 FAM26FQ5R3K3 315 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 PRAMEF19Q5SWL8 479 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 PLA2G4FQ68DD2 849 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 C11orf57Q6ZUT1 292 aaPredicted RBP17.09■□□□□ 0.33
VAMP1-207ENST00000539047 GAS2L3Q86XJ1 694 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 SLAIN1Q8ND83 568 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 DNAJC19Q96DA6 116 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 JPH2Q9BR39 696 aaPredicted RBP17.09■□□□□ 0.33
VAMP1-207ENST00000539047 GRPEL1Q9HAV7 217 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 ATP6V0A4Q9HBG4 840 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 PARVGQ9HBI0 331 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 CYP26B1Q9NR63 512 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 TRPC6Q9Y210 931 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 SYNRGQ9UMZ2 1314 aa17.09■□□□□ 0.33
VAMP1-207ENST00000539047 DYNC1LI2O43237 492 aaPredicted RBP17.08■□□□□ 0.32
VAMP1-207ENST00000539047 ZNF862O60290 1169 aa17.08■□□□□ 0.32
VAMP1-207ENST00000539047 PPFIA4O75335 1185 aa17.08■□□□□ 0.32
VAMP1-207ENST00000539047 LGALS2P05162 132 aa17.08■□□□□ 0.32
VAMP1-207ENST00000539047 MMP3P08254 477 aa17.08■□□□□ 0.32
VAMP1-207ENST00000539047 ERCC5P28715 1186 aaPredicted RBP17.08■□□□□ 0.32
VAMP1-207ENST00000539047 GIT2Q14161 759 aa17.08■□□□□ 0.32
VAMP1-207ENST00000539047 GJC2Q5T442 439 aaPredicted RBP17.08■□□□□ 0.32
VAMP1-207ENST00000539047 C1orf186Q6ZWK4 172 aa17.08■□□□□ 0.32
VAMP1-207ENST00000539047 ANO5Q75V66 913 aa17.08■□□□□ 0.32
VAMP1-207ENST00000539047 SLC17A8Q8NDX2 589 aa17.08■□□□□ 0.32
VAMP1-207ENST00000539047 PXYLP1Q8TE99 480 aa17.08■□□□□ 0.32
VAMP1-207ENST00000539047 ATP8B4Q8TF62 1192 aa17.08■□□□□ 0.32
VAMP1-207ENST00000539047 SLC7A3Q8WY07 619 aa17.08■□□□□ 0.32
VAMP1-207ENST00000539047 RBSNQ9H1K0 784 aa17.08■□□□□ 0.32
VAMP1-207ENST00000539047 LARSQ9P2J5 1176 aaKnown RBP17.08■□□□□ 0.32
VAMP1-207ENST00000539047 NPHP3-ACAD11A0A0J9YXS1 232 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 FSD2A1L4K1 749 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 ZBTB39O15060 712 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 ZEB2O60315 1214 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 HBP1O60381 514 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 HIP1RO75146 1068 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 DUSP11O75319 330 aaKnown RBP17.07■□□□□ 0.32
VAMP1-207ENST00000539047 IGHA2P01877 340 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 RARBP10826 455 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 MARK3P27448 753 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 MYL5Q02045 173 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 PAK1Q13153 545 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 TPD52L1Q16890 204 aaPredicted RBP17.07■□□□□ 0.32
VAMP1-207ENST00000539047 UVSSAQ2YD98 709 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 ARSHQ5FYA8 562 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 KLHL10Q6JEL2 608 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 MYCT1Q8N699 235 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 AOPEPQ8N6M6 819 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 KIFAP3Q92845 792 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 NIFKQ9BYG3 293 aaKnown RBP17.07■□□□□ 0.32
VAMP1-207ENST00000539047 CBX8Q9HC52 389 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 KCNG1Q9UIX4 513 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 GNEQ9Y223 722 aaKnown RBP17.07■□□□□ 0.32
VAMP1-207ENST00000539047 KAT6AQ92794 2004 aa17.07■□□□□ 0.32
VAMP1-207ENST00000539047 COL1A2P08123 1366 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 BICDL2A1A5D9 508 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 FRMD3A2A2Y4 597 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 SEPT4O43236 478 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 GAS2O43903 313 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms