RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 CLDND1Q9NY35 253 aa14.22□□□□□ -0.13
VAMP1-206ENST00000538970 SNX14Q9Y5W7 946 aa14.22□□□□□ -0.13
VAMP1-206ENST00000538970 TTC3P53804 2025 aa14.22□□□□□ -0.13
VAMP1-206ENST00000538970 ZBTB42B2RXF5 422 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 PRPF3O43395 683 aaKnown RBP14.21□□□□□ -0.13
VAMP1-206ENST00000538970 STAG3L1P0CL83 205 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 ATP4AP20648 1035 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 HYAL1Q12794 435 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 TMEM266Q2M3C6 531 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 ZNF484Q5JVG2 852 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 SWSAP1Q6NVH7 229 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 MIS18BP1Q6P0N0 1132 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 PDXDC2PQ6P474 469 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 BLOC1S2Q6QNY1 142 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 EP400NLQ6ZTU2 488 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 HFE2Q6ZVN8 426 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 FBXL16Q8N461 479 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 P2RX5Q93086 422 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 ZNF577Q9BSK1 485 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 AGXT2Q9BYV1 514 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 ERVK-5Q9HDB9 667 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 TBC1D22BQ9NU19 505 aa14.21□□□□□ -0.13
VAMP1-206ENST00000538970 DCXO43602 365 aa14.2□□□□□ -0.14
VAMP1-206ENST00000538970 NCK2O43639 380 aa14.2□□□□□ -0.14
VAMP1-206ENST00000538970 C22orf31O95567 290 aa14.2□□□□□ -0.14
VAMP1-206ENST00000538970 RPS6KB1P23443 525 aa14.2□□□□□ -0.14
VAMP1-206ENST00000538970 LTBRP36941 435 aa14.2□□□□□ -0.14
VAMP1-206ENST00000538970 CAMK1Q14012 370 aa14.2□□□□□ -0.14
VAMP1-206ENST00000538970 CTC1Q2NKJ3 1217 aa14.2□□□□□ -0.14
VAMP1-206ENST00000538970 ZNF746Q6NUN9 644 aaPredicted RBP14.2□□□□□ -0.14
VAMP1-206ENST00000538970 FAM43BQ6ZT52 329 aaPredicted RBP14.2□□□□□ -0.14
VAMP1-206ENST00000538970 KIAA0319LQ8IZA0 1049 aa14.2□□□□□ -0.14
VAMP1-206ENST00000538970 TMEM40Q8WWA1 233 aa14.2□□□□□ -0.14
VAMP1-206ENST00000538970 PHKBQ93100 1093 aa14.2□□□□□ -0.14
VAMP1-206ENST00000538970 KCNH6Q9H252 994 aa14.2□□□□□ -0.14
VAMP1-206ENST00000538970 CDHR5Q9HBB8 845 aa14.2□□□□□ -0.14
VAMP1-206ENST00000538970 ALG13Q9NP73 1137 aaKnown RBP14.2□□□□□ -0.14
VAMP1-206ENST00000538970 PLAGL2Q9UPG8 496 aa14.2□□□□□ -0.14
VAMP1-206ENST00000538970 GINS2Q9Y248 185 aa14.2□□□□□ -0.14
VAMP1-206ENST00000538970 NOC2LQ9Y3T9 749 aaKnown RBP14.2□□□□□ -0.14
VAMP1-206ENST00000538970 MAFBQ9Y5Q3 323 aaPredicted RBP14.2□□□□□ -0.14
VAMP1-206ENST00000538970 KIAA1671Q9BY89 1806 aa14.2□□□□□ -0.14
VAMP1-206ENST00000538970 MGEA5O60502 916 aa14.19□□□□□ -0.14
VAMP1-206ENST00000538970 CSPG5O95196 566 aa14.19□□□□□ -0.14
VAMP1-206ENST00000538970 GNA11P29992 359 aa14.19□□□□□ -0.14
VAMP1-206ENST00000538970 CIITAP33076 1130 aa14.19□□□□□ -0.14
VAMP1-206ENST00000538970 SARSP49591 514 aaKnown RBP14.19□□□□□ -0.14
VAMP1-206ENST00000538970 GATMP50440 423 aa14.19□□□□□ -0.14
VAMP1-206ENST00000538970 NFX1Q12986 1120 aaKnown RBP14.19□□□□□ -0.14
VAMP1-206ENST00000538970 NTRK3Q16288 839 aa14.19□□□□□ -0.14
VAMP1-206ENST00000538970 PAN2Q504Q3 1202 aaKnown RBP14.19□□□□□ -0.14
VAMP1-206ENST00000538970 PRR16Q569H4 304 aa14.19□□□□□ -0.14
VAMP1-206ENST00000538970 NAALADL2Q58DX5 795 aa14.19□□□□□ -0.14
VAMP1-206ENST00000538970 SMAP1Q8IYB5 467 aaPredicted RBP14.19□□□□□ -0.14
VAMP1-206ENST00000538970 RASGRP4Q8TDF6 673 aa14.19□□□□□ -0.14
VAMP1-206ENST00000538970 BBXQ8WY36 941 aaPredicted RBP14.19□□□□□ -0.14
VAMP1-206ENST00000538970 LENG9Q96B70 501 aa14.19□□□□□ -0.14
VAMP1-206ENST00000538970 RNF26Q9BY78 433 aaPredicted RBP14.19□□□□□ -0.14
VAMP1-206ENST00000538970 FAM50BQ9Y247 325 aa14.19□□□□□ -0.14
VAMP1-206ENST00000538970 CFAP54Q96N23 3096 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 PPFIA3O75145 1194 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 TBX10O75333 385 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 RPS6KA5O75582 802 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 ITGB1P05556 798 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 PSAPP07602 524 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 IFNAR1P17181 557 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 DNAJB1P25685 340 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 GTF2F1P35269 517 aaKnown RBP eCLIP14.18□□□□□ -0.14
VAMP1-206ENST00000538970 ZP2Q05996 745 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 DLX2Q07687 328 aaPredicted RBP14.18□□□□□ -0.14
VAMP1-206ENST00000538970 CKAP2LQ8IYA6 745 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 KLHL23Q8NBE8 558 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 PRSS33Q8NF86 280 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 CCDC148Q8NFR7 591 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 SPPL3Q8TCT6 385 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 BICD2Q8TD16 824 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 RGS18Q9NS28 235 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 C1orf112Q9NSG2 853 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 PRKAG3Q9UGI9 489 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 TCEAL9Q9UHQ7 104 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 LRFN2Q9ULH4 789 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 PCDHA10Q9Y5I2 948 aa14.18□□□□□ -0.14
VAMP1-206ENST00000538970 DENND3A2RUS2 1198 aa14.17□□□□□ -0.14
VAMP1-206ENST00000538970 LINC01565O15544 149 aa14.17□□□□□ -0.14
VAMP1-206ENST00000538970 IBSPP21815 317 aaPredicted RBP14.17□□□□□ -0.14
VAMP1-206ENST00000538970 EVCP57679 992 aa14.17□□□□□ -0.14
VAMP1-206ENST00000538970 AKAP17AQ02040 695 aaKnown RBP14.17□□□□□ -0.14
VAMP1-206ENST00000538970 CLUL1Q15846 466 aa14.17□□□□□ -0.14
VAMP1-206ENST00000538970 KIZQ2M2Z5 673 aa14.17□□□□□ -0.14
VAMP1-206ENST00000538970 ODR4Q5SWX8 454 aa14.17□□□□□ -0.14
VAMP1-206ENST00000538970 FAM228AQ86W67 206 aa14.17□□□□□ -0.14
VAMP1-206ENST00000538970 PPP1R16BQ96T49 567 aa14.17□□□□□ -0.14
VAMP1-206ENST00000538970 OSMRQ99650 979 aa14.17□□□□□ -0.14
VAMP1-206ENST00000538970 ADAM2Q99965 735 aa14.17□□□□□ -0.14
VAMP1-206ENST00000538970 SLC26A6Q9BXS9 759 aa14.17□□□□□ -0.14
VAMP1-206ENST00000538970 VPS54Q9P1Q0 977 aa14.17□□□□□ -0.14
VAMP1-206ENST00000538970 GABBR1Q9UBS5 961 aa14.17□□□□□ -0.14
VAMP1-206ENST00000538970 ST3GAL5Q9UNP4 418 aa14.17□□□□□ -0.14
VAMP1-206ENST00000538970 CEP131Q9UPN4 1083 aa14.17□□□□□ -0.14
VAMP1-206ENST00000538970 TRIOO75962 3097 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 436 ms