RNA–Protein interactions for RNA: ENST00000538859.1

NPIPB4-209, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-209ENST00000538859 NR2E1Q9Y466 385 aa2.35□□□□□ -2.03
NPIPB4-209ENST00000538859 RIPOR2Q9Y4F9 1068 aa2.35□□□□□ -2.03
NPIPB4-209ENST00000538859 SETD1BQ9UPS6 1966 aaKnown RBP2.35□□□□□ -2.03
NPIPB4-209ENST00000538859 CCDC85CA6NKD9 419 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 ZNF839A8K0R7 811 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 MATN2O00339 956 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 TBX1O43435 398 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 DNAJC6O75061 913 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 PEX11BO96011 259 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 PROZP22891 400 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 MSX2P35548 267 aaPredicted RBP2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 HHEXQ03014 270 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 DUSP8Q13202 625 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 OS9Q13438 667 aaPredicted RBP2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 TOP3AQ13472 1001 aaPredicted RBP2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 NFYCQ13952 458 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 SF1Q15637 639 aaKnown RBP2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 SV2CQ496J9 727 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 CD276Q5ZPR3 534 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 EGFLAMQ63HQ2 1017 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 OTOP3Q7RTS5 596 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 TICAM2Q86XR7 235 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 TMPRSS6Q8IU80 811 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 THEMISQ8N1K5 641 aaPredicted RBP2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 RASGRP4Q8TDF6 673 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 SRPK1Q96SB4 655 aaKnown RBP2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 TACO1Q9BSH4 297 aaKnown RBP2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 TTPALQ9BTX7 342 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 SPC25Q9HBM1 224 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 SLC2A4RGQ9NR83 387 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 TLR9Q9NR96 1032 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 PARPBPQ9NWS1 579 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 PLA2G3Q9NZ20 509 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 CEP72Q9P209 647 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 MAGEC2Q9UBF1 373 aaPredicted RBP2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 TCEAL9Q9UHQ7 104 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 G3BP2Q9UN86 482 aaKnown RBP2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 COL4A3BPQ9Y5P4 624 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 NPFFR2Q9Y5X5 522 aa2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 MRPL42Q9Y6G3 142 aaKnown RBP2.34□□□□□ -2.03
NPIPB4-209ENST00000538859 LOC102724159A0A0B4J2E5 919 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 TMEM191CA6NGB0 347 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 ARHGAP6O43182 974 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 LTFP02788 710 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 COL6A2P12110 1019 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 HSD3B2P26439 372 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 NASPP49321 788 aaPredicted RBP2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 RRADP55042 308 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 GFRA1P56159 465 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 PWP2Q15269 919 aaKnown RBP2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 SLC35F1Q5T1Q4 408 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 LAIR1Q6GTX8 287 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 ADGRE4PQ86SQ3 457 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 METTL16Q86W50 562 aaKnown RBP2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 ZNF227Q86WZ6 799 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 FAM169BQ8N8A8 192 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 TMEM145Q8NBT3 493 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 GPR150Q8NGU9 434 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 GPRASP2Q96D09 838 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 NELL2Q99435 816 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 PCGF6Q9BYE7 350 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 NELFAQ9H3P2 528 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 PIF1Q9H611 641 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 MSL2Q9HCI7 577 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 PUF60Q9UHX1 559 aaKnown RBP2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 GIT1Q9Y2X7 761 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 TBX22Q9Y458 520 aa2.33□□□□□ -2.04
NPIPB4-209ENST00000538859 KRTAP23-1A1A580 65 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 ACOT7O00154 380 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 CYP27B1O15528 508 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 PLIN1O60240 522 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 NUDT3O95989 172 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 CNGA1P29973 690 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 ETV4P43268 484 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 EPHA5P54756 1037 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 SPIRE1Q08AE8 756 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 TBR1Q16650 682 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 WDR72Q3MJ13 1102 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 USP30Q70CQ3 517 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 JAZF1Q86VZ6 243 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 CCDC146Q8IYE0 955 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 D2HGDHQ8N465 521 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 UHMK1Q8TAS1 419 aaKnown RBP2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 CFHR4Q92496 578 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 C1orf159Q96HA4 380 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 GPATCH3Q96I76 525 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 KCNJ15Q99712 375 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 ZDHHC5Q9C0B5 715 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 GPR27Q9NS67 375 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 IFT57Q9NWB7 429 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 CHPF2Q9P2E5 772 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 DSEQ9UL01 958 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 TELO2Q9Y4R8 837 aa2.32□□□□□ -2.04
NPIPB4-209ENST00000538859 CAPN14A8MX76 684 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 NKRFO15226 690 aaKnown RBP eCLIP2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 MSCO60682 206 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 CDC45O75419 566 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 PARNO95453 639 aaKnown RBP2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 MAP4K4O95819 1239 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms