RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 NEK11Q8NG66 645 aa16.3■□□□□ 0.2
ATL3-203ENST00000538786 SMCR8Q8TEV9 937 aaPredicted RBP16.3■□□□□ 0.2
ATL3-203ENST00000538786 TIPINQ9BVW5 301 aa16.3■□□□□ 0.2
ATL3-203ENST00000538786 MOV10L1Q9BXT6 1211 aaKnown RBP16.3■□□□□ 0.2
ATL3-203ENST00000538786 METTL14Q9HCE5 456 aaKnown RBP16.3■□□□□ 0.2
ATL3-203ENST00000538786 PCDHB13Q9Y5F0 798 aa16.3■□□□□ 0.2
ATL3-203ENST00000538786 ZMYM2Q9UBW7 1377 aa16.3■□□□□ 0.2
ATL3-203ENST00000538786 CXCL11O14625 94 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 IRF6O14896 467 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 RGS20O76081 388 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 KCNA2P16389 499 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 CASQ1P31415 396 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 EPHX2P34913 555 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 UGCGQ16739 394 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 ARHGAP29Q52LW3 1261 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 DNERQ8NFT8 737 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 TSC1Q92574 1164 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 OTUD5Q96G74 571 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 WDR24Q96S15 920 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 IWS1Q96ST2 819 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 STRA6Q9BX79 667 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 LARSQ9P2J5 1176 aaKnown RBP16.29■□□□□ 0.2
ATL3-203ENST00000538786 FBXO40Q9UH90 709 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 PCDHA10Q9Y5I2 948 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 SPDYE5A6NIY4 337 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 KIF5CO60282 957 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 AKAP3O75969 853 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 MAPTP10636 758 aaKnown RBP16.29■□□□□ 0.2
ATL3-203ENST00000538786 CYLC1P35663 651 aaPredicted RBP16.29■□□□□ 0.2
ATL3-203ENST00000538786 KRT83P78385 493 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 GNPTABQ3T906 1256 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 GADL1Q6ZQY3 521 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 RIOX2Q8IUF8 465 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 SMAP1Q8IYB5 467 aaPredicted RBP16.29■□□□□ 0.2
ATL3-203ENST00000538786 CCDC43Q96MW1 224 aaKnown RBP16.29■□□□□ 0.2
ATL3-203ENST00000538786 NHEJ1Q9H9Q4 299 aaPredicted RBP16.29■□□□□ 0.2
ATL3-203ENST00000538786 ANKEF1Q9NU02 776 aa16.29■□□□□ 0.2
ATL3-203ENST00000538786 REXO2Q9Y3B8 237 aaKnown RBP16.29■□□□□ 0.2
ATL3-203ENST00000538786 POLR2AP24928 1970 aaKnown RBP16.29■□□□□ 0.2
ATL3-203ENST00000538786 PFASO15067 1338 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 NFASCO94856 1347 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 UTRNP46939 3433 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 A0A0U1RQJ8 604 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 SPATA31C2B4DYI2 1134 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 PPP1R37O75864 691 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 SLU7O95391 586 aaKnown RBP16.28■□□□□ 0.2
ATL3-203ENST00000538786 EPB41P11171 864 aaKnown RBP16.28■□□□□ 0.2
ATL3-203ENST00000538786 KCNH2Q12809 1159 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 ALCAMQ13740 583 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 GOLGA5Q8TBA6 731 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 ATRIPQ8WXE1 791 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 BAP1Q92560 729 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 CLMNQ96JQ2 1002 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 BTBD7Q9P203 1132 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 CEP72Q9P209 647 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 OTOFQ9HC10 1997 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 LOC285556D6RIA3 1793 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 LOXHD1Q8IVV2 1947 aa16.28■□□□□ 0.2
ATL3-203ENST00000538786 EIF3CLB5ME19 914 aaKnown RBP16.27■□□□□ 0.2
ATL3-203ENST00000538786 XRCC5P13010 732 aaKnown RBP16.27■□□□□ 0.2
ATL3-203ENST00000538786 ARHGAP25P42331 645 aa16.27■□□□□ 0.2
ATL3-203ENST00000538786 HS2ST1Q7LGA3 356 aa16.27■□□□□ 0.2
ATL3-203ENST00000538786 CACNA2D4Q7Z3S7 1137 aa16.27■□□□□ 0.2
ATL3-203ENST00000538786 ANKRD35Q8N283 1001 aa16.27■□□□□ 0.2
ATL3-203ENST00000538786 ERO1AQ96HE7 468 aa16.27■□□□□ 0.2
ATL3-203ENST00000538786 DRC1Q96MC2 740 aa16.27■□□□□ 0.2
ATL3-203ENST00000538786 EIF3CQ99613 913 aaKnown RBP16.27■□□□□ 0.2
ATL3-203ENST00000538786 GBP3Q9H0R5 595 aa16.27■□□□□ 0.2
ATL3-203ENST00000538786 NUCKS1Q9H1E3 243 aaKnown RBP16.27■□□□□ 0.2
ATL3-203ENST00000538786 ZNF215Q9UL58 517 aaPredicted RBP16.27■□□□□ 0.2
ATL3-203ENST00000538786 KCNH4Q9UQ05 1017 aa16.27■□□□□ 0.2
ATL3-203ENST00000538786 LRRC53A6NM62 1247 aa16.27■□□□□ 0.19
ATL3-203ENST00000538786 BACH1O14867 736 aa16.27■□□□□ 0.19
ATL3-203ENST00000538786 CLIC2O15247 247 aa16.27■□□□□ 0.19
ATL3-203ENST00000538786 USO1O60763 962 aaKnown RBP16.27■□□□□ 0.19
ATL3-203ENST00000538786 DKC1O60832 514 aaKnown RBP eCLIP16.27■□□□□ 0.19
ATL3-203ENST00000538786 URI1O94763 535 aaPredicted RBP16.27■□□□□ 0.19
ATL3-203ENST00000538786 AFPP02771 609 aaKnown RBP16.27■□□□□ 0.19
ATL3-203ENST00000538786 PLS3P13797 630 aa16.27■□□□□ 0.19
ATL3-203ENST00000538786 IRX3P78415 501 aaPredicted RBP16.27■□□□□ 0.19
ATL3-203ENST00000538786 TTLL12Q14166 644 aaPredicted RBP16.27■□□□□ 0.19
ATL3-203ENST00000538786 STXBP2Q15833 593 aa16.27■□□□□ 0.19
ATL3-203ENST00000538786 RRAGAQ7L523 313 aa16.27■□□□□ 0.19
ATL3-203ENST00000538786 MKNK1Q9BUB5 465 aa16.27■□□□□ 0.19
ATL3-203ENST00000538786 LSM14BQ9BX40 385 aaKnown RBP16.27■□□□□ 0.19
ATL3-203ENST00000538786 IRX2Q9BZI1 471 aaPredicted RBP16.27■□□□□ 0.19
ATL3-203ENST00000538786 SPATC1LQ9H0A9 340 aa16.27■□□□□ 0.19
ATL3-203ENST00000538786 JPH1Q9HDC5 661 aaPredicted RBP16.27■□□□□ 0.19
ATL3-203ENST00000538786 MYO1AQ9UBC5 1043 aa16.27■□□□□ 0.19
ATL3-203ENST00000538786 A0A0G2JMZ2 1700 aa16.26■□□□□ 0.19
ATL3-203ENST00000538786 NOL4O94818 638 aa16.26■□□□□ 0.19
ATL3-203ENST00000538786 IPO7O95373 1038 aaKnown RBP16.26■□□□□ 0.19
ATL3-203ENST00000538786 PSAPP07602 524 aa16.26■□□□□ 0.19
ATL3-203ENST00000538786 PSMC2P35998 433 aaKnown RBP16.26■□□□□ 0.19
ATL3-203ENST00000538786 CASP4P49662 377 aa16.26■□□□□ 0.19
ATL3-203ENST00000538786 PPIL2Q13356 520 aa16.26■□□□□ 0.19
ATL3-203ENST00000538786 UTP14CQ5TAP6 766 aaKnown RBP16.26■□□□□ 0.19
ATL3-203ENST00000538786 PDXDC1Q6P996 788 aa16.26■□□□□ 0.19
ATL3-203ENST00000538786 ZNF662Q6ZS27 426 aa16.26■□□□□ 0.19
ATL3-203ENST00000538786 MOB2Q70IA6 237 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms