RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 MARK3P27448 753 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 NEK2P51955 445 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 SSRP1Q08945 709 aaKnown RBP13.43□□□□□ -0.26
USP3-203ENST00000538686 PPP2R5EQ16537 467 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 THOC7Q6I9Y2 204 aaKnown RBP13.43□□□□□ -0.26
USP3-203ENST00000538686 VSIG1Q86XK7 387 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 C2CD5Q86YS7 1000 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 DIS3L2Q8IYB7 885 aaKnown RBP13.43□□□□□ -0.26
USP3-203ENST00000538686 SUPT20HQ8NEM7 779 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 ZMYND12Q9H0C1 365 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 NEUROG2Q9H2A3 272 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 TLE6Q9H808 572 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 NFAT5O94916 1531 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 ARHGAP23Q9P227 1491 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 ASMTLO95671 621 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 SERPINB3P29508 390 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 ATP5DP30049 168 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 IFNAR2P48551 515 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 RTP1P59025 263 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 RAB15P59190 212 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 RC3H1Q5TC82 1133 aaKnown RBP13.43□□□□□ -0.26
USP3-203ENST00000538686 SCUBE1Q8IWY4 988 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 ADSSL1Q8N142 457 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 PDCD7Q8N8D1 485 aaKnown RBP13.43□□□□□ -0.26
USP3-203ENST00000538686 DQX1Q8TE96 717 aaKnown RBP13.43□□□□□ -0.26
USP3-203ENST00000538686 CTNNBL1Q8WYA6 563 aaPredicted RBP13.43□□□□□ -0.26
USP3-203ENST00000538686 ABTB1Q969K4 478 aaPredicted RBP13.43□□□□□ -0.26
USP3-203ENST00000538686 AGBL1Q96MI9 1066 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 SETDB2Q96T68 719 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 DHX36Q9H2U1 1008 aaKnown RBP13.43□□□□□ -0.26
USP3-203ENST00000538686 USP40Q9NVE5 1235 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 BTBD7Q9P203 1132 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 A0A087X0B3 334 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 H0Y3Z8 333 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 PGRMC1O00264 195 aaKnown RBP13.42□□□□□ -0.26
USP3-203ENST00000538686 PSMA7O14818 248 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 LGR5O75473 907 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 PALMO75781 387 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 DCTN3O75935 186 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 CYP1A1P04798 512 aaPredicted RBP13.42□□□□□ -0.26
USP3-203ENST00000538686 VARSP26640 1264 aaKnown RBP13.42□□□□□ -0.26
USP3-203ENST00000538686 ANTXR2P58335 489 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 IDI1Q13907 227 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 NAB2Q15742 525 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 TMEM132AQ24JP5 1023 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 TNFAIP8L3Q5GJ75 292 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 SYDE2Q5VT97 1194 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 TCERG1LQ5VWI1 586 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 PHLDB3Q6NSJ2 640 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 C3orf62Q6ZUJ4 267 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 USP49Q70CQ1 688 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 ZSCAN29Q8IWY8 852 aaPredicted RBP13.42□□□□□ -0.26
USP3-203ENST00000538686 IQCF2Q8IXL9 164 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 SYMPKQ92797 1274 aaKnown RBP13.42□□□□□ -0.26
USP3-203ENST00000538686 SIKE1Q9BRV8 207 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 TBC1D10AQ9BXI6 508 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 EDEM3Q9BZQ6 932 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 PCDHB6Q9Y5E3 794 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 USH1CQ9Y6N9 552 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 PLEKHG1Q9ULL1 1385 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 MAST3O60307 1309 aa13.42□□□□□ -0.26
USP3-203ENST00000538686 TRIM75PA6NK02 468 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 BTBD18B2RXH4 712 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 RNF113AO15541 343 aaKnown RBP13.41□□□□□ -0.26
USP3-203ENST00000538686 CCNFP41002 786 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 YARSP54577 528 aaKnown RBP13.41□□□□□ -0.26
USP3-203ENST00000538686 DCTN2Q13561 401 aaKnown RBP13.41□□□□□ -0.26
USP3-203ENST00000538686 RPS6KA1Q15418 735 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 PDCD4Q53EL6 469 aaKnown RBP13.41□□□□□ -0.26
USP3-203ENST00000538686 OLFML2BQ68BL8 750 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 MFSD5Q6N075 450 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 TMEM53Q6P2H8 277 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 HS2ST1Q7LGA3 356 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 SUCLG2Q96I99 432 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 TRIM47Q96LD4 638 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 MTFR1LQ9H019 292 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 DENND2DQ9H6A0 471 aaPredicted RBP13.41□□□□□ -0.26
USP3-203ENST00000538686 AZI2Q9H6S1 392 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 COPRSQ9NQ92 184 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 PAG1Q9NWQ8 432 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 CHPF2Q9P2E5 772 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 DAPK3O43293 454 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 BUB1O43683 1085 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 RPN1P04843 607 aaKnown RBP13.41□□□□□ -0.26
USP3-203ENST00000538686 FLT3P36888 993 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 PPP1R2P41236 205 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 PRCPP42785 496 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 POLGP54098 1239 aaPredicted RBP13.41□□□□□ -0.26
USP3-203ENST00000538686 PMS2P54278 862 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 GIT2Q14161 759 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 DDB1Q16531 1140 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 ZCWPW2Q504Y3 356 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 KSR2Q6VAB6 950 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 ZCRB1Q8TBF4 217 aaKnown RBP13.41□□□□□ -0.26
USP3-203ENST00000538686 PIP4K2CQ8TBX8 421 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 CKAP2Q8WWK9 683 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 MPP4Q96JB8 637 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 TRAIPQ9BWF2 469 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 STX18Q9P2W9 335 aaKnown RBP13.41□□□□□ -0.26
USP3-203ENST00000538686 SALL4Q9UJQ4 1053 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms