RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 POLD4Q9HCU8 107 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 ADAM21Q9UKJ8 722 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 LUC7L2Q9Y383 392 aaKnown RBP11.84□□□□□ -0.51
CLIP1-210ENST00000538120 RABGAP1Q9Y3P9 1069 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 UBIAD1Q9Y5Z9 338 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 FRMPD4Q14CM0 1322 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 VWA5AO00534 786 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 SNPHO15079 494 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 DHX15O43143 795 aaKnown RBP11.84□□□□□ -0.51
CLIP1-210ENST00000538120 BCRP11274 1271 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 FKBP3Q00688 224 aaKnown RBP11.84□□□□□ -0.51
CLIP1-210ENST00000538120 EPHA7Q15375 998 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 TPH2Q8IWU9 490 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 ACRBPQ8NEB7 543 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 REPS2Q8NFH8 660 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 ATG4CQ96DT6 458 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 KLRG1Q96E93 195 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 TAAR1Q96RJ0 339 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 NUP58Q9BVL2 599 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 WDR11Q9BZH6 1224 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 ZHX3Q9H4I2 956 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 HOMER2Q9NSB8 354 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 GGA3Q9NZ52 723 aa11.84□□□□□ -0.51
CLIP1-210ENST00000538120 RBBP6Q7Z6E9 1792 aaKnown RBP11.83□□□□□ -0.52
CLIP1-210ENST00000538120 DOCK1Q14185 1865 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 IPO5O00410 1097 aaKnown RBP11.83□□□□□ -0.52
CLIP1-210ENST00000538120 TRAF5O00463 557 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 N4BP1O75113 896 aaKnown RBP11.83□□□□□ -0.52
CLIP1-210ENST00000538120 FIGNQ5HY92 759 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 ZNF569Q5MCW4 686 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 ARHGAP27Q6ZUM4 889 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 C1orf186Q6ZWK4 172 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 SRGAP1Q7Z6B7 1085 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 GPC2Q8N158 579 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 TXLNBQ8N3L3 684 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 C12orf42Q96LP6 360 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 CEP63Q96MT8 703 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 RIT2Q99578 217 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 TEKT3Q9BXF9 490 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 PDE11AQ9HCR9 933 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 LCMT1Q9UIC8 334 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 REXO2Q9Y3B8 237 aaKnown RBP11.83□□□□□ -0.52
CLIP1-210ENST00000538120 COL4A3BPQ9Y5P4 624 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 MAP2K7O14733 419 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 EPHB6O15197 1021 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 ZBED4O75132 1171 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 MYBP10242 640 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 LMAN1P49257 510 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 RPS6P62753 249 aaKnown RBP11.83□□□□□ -0.52
CLIP1-210ENST00000538120 MEA1Q16626 185 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 ZSCAN26Q16670 478 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 ARSIQ5FYB1 569 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 FKBP15Q5T1M5 1219 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 PCNX4Q63HM2 1172 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 NIPA1Q7RTP0 329 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 PURBQ96QR8 312 aaKnown RBP11.83□□□□□ -0.52
CLIP1-210ENST00000538120 KCNH7Q9NS40 1196 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 MAP3K20Q9NYL2 800 aaKnown RBP11.83□□□□□ -0.52
CLIP1-210ENST00000538120 RIPK3Q9Y572 518 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 ZHX2Q9Y6X8 837 aa11.83□□□□□ -0.52
CLIP1-210ENST00000538120 A0A1W2PQJ5 194 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 CCDC151A5D8V7 595 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 ERCC3P19447 782 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 LMNB1P20700 586 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 MUTP22033 750 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 MARSP56192 900 aaKnown RBP11.82□□□□□ -0.52
CLIP1-210ENST00000538120 ZBED6P86452 979 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 ITGB3BPQ13352 177 aaPredicted RBP11.82□□□□□ -0.52
CLIP1-210ENST00000538120 TKFCQ3LXA3 575 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 BEND6Q5SZJ8 279 aaPredicted RBP11.82□□□□□ -0.52
CLIP1-210ENST00000538120 KRT26Q7Z3Y9 468 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 SAMD3Q8N6K7 520 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 AS3MTQ9HBK9 375 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 AGO4Q9HCK5 861 aaKnown RBP11.82□□□□□ -0.52
CLIP1-210ENST00000538120 JADE2Q9NQC1 790 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 PICK1Q9NRD5 415 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 FEZ2Q9UHY8 353 aaPredicted RBP11.82□□□□□ -0.52
CLIP1-210ENST00000538120 ADAMTS5Q9UNA0 930 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 RHOXF2BP0C7M4 288 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 TRIM21P19474 475 aaKnown RBP11.82□□□□□ -0.52
CLIP1-210ENST00000538120 ARHGAP25P42331 645 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 HMGCS2P54868 508 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 KCNMA1Q12791 1236 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 BMT2Q1RMZ1 405 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 SLC35F6Q8N357 371 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 CCDC155Q8N6L0 562 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 RHOXF2Q9BQY4 288 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 TRAF3IP3Q9Y228 551 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 EPN1Q9Y6I3 576 aaPredicted RBP11.82□□□□□ -0.52
CLIP1-210ENST00000538120 UTRNP46939 3433 aa11.82□□□□□ -0.52
CLIP1-210ENST00000538120 SFI1A8K8P3 1242 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 PRPF6O94906 941 aaKnown RBP11.81□□□□□ -0.52
CLIP1-210ENST00000538120 FDX1P10109 184 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 EIF2AK2P19525 551 aaKnown RBP11.81□□□□□ -0.52
CLIP1-210ENST00000538120 PGM5Q15124 567 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 KNOP1Q1ED39 458 aaKnown RBP11.81□□□□□ -0.52
CLIP1-210ENST00000538120 EDRF1Q3B7T1 1238 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 DLK2Q6UY11 383 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 TRIM59Q8IWR1 403 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 PCMTD1Q96MG8 357 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms