RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 MTHFRP42898 656 aa12.81□□□□□ -0.36
CLPB-208ENST00000538021 PLCB3Q01970 1234 aa12.81□□□□□ -0.36
CLPB-208ENST00000538021 ITIH3Q06033 890 aa12.81□□□□□ -0.36
CLPB-208ENST00000538021 IMMTQ16891 758 aaKnown RBP12.81□□□□□ -0.36
CLPB-208ENST00000538021 XRRA1Q6P2D8 792 aa12.81□□□□□ -0.36
CLPB-208ENST00000538021 USP17L6PQ6QN14 398 aa12.81□□□□□ -0.36
CLPB-208ENST00000538021 SLC24A5Q71RS6 500 aa12.81□□□□□ -0.36
CLPB-208ENST00000538021 TNPO1Q92973 898 aaKnown RBP12.81□□□□□ -0.36
CLPB-208ENST00000538021 CUL5Q93034 780 aa12.81□□□□□ -0.36
CLPB-208ENST00000538021 CDHR1Q96JP9 859 aa12.81□□□□□ -0.36
CLPB-208ENST00000538021 RIOX1Q9H6W3 641 aa12.81□□□□□ -0.36
CLPB-208ENST00000538021 ATP6V0A4Q9HBG4 840 aa12.81□□□□□ -0.36
CLPB-208ENST00000538021 C1orf112Q9NSG2 853 aa12.81□□□□□ -0.36
CLPB-208ENST00000538021 DBR1Q9UK59 544 aaKnown RBP12.81□□□□□ -0.36
CLPB-208ENST00000538021 HCFC2Q9Y5Z7 792 aa12.81□□□□□ -0.36
CLPB-208ENST00000538021 CACNA1BQ00975 2339 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 ZNF292O60281 2723 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 RPS6KA5O75582 802 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 LMNAP02545 664 aaKnown RBP12.8□□□□□ -0.36
CLPB-208ENST00000538021 ARP10275 920 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 AOC1P19801 751 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 PDE4AP27815 886 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 PBX3P40426 434 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 KRT17Q04695 432 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 GRM4Q14833 912 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 SEC23AQ15436 765 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 RARS2Q5T160 578 aaKnown RBP12.8□□□□□ -0.36
CLPB-208ENST00000538021 TICAM2Q86XR7 235 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 CCDC105Q8IYK2 499 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 ZDHHC14Q8IZN3 488 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 PLCD3Q8N3E9 789 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 C12orf76Q8N812 135 aaPredicted RBP12.8□□□□□ -0.36
CLPB-208ENST00000538021 GPRASP2Q96D09 838 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 HINFPQ9BQA5 517 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 AZI2Q9H6S1 392 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 CNNM2Q9H8M5 875 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 ERVK-5Q9HDB9 667 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 RGS18Q9NS28 235 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 NOC2LQ9Y3T9 749 aaKnown RBP12.8□□□□□ -0.36
CLPB-208ENST00000538021 KDM3AQ9Y4C1 1321 aa12.8□□□□□ -0.36
CLPB-208ENST00000538021 EP300Q09472 2414 aaPredicted RBP12.79□□□□□ -0.36
CLPB-208ENST00000538021 LAMA4Q16363 1823 aa12.79□□□□□ -0.36
CLPB-208ENST00000538021 SDSP20132 328 aa12.79□□□□□ -0.36
CLPB-208ENST00000538021 MTMR1Q13613 665 aa12.79□□□□□ -0.36
CLPB-208ENST00000538021 SMC1AQ14683 1233 aaKnown RBP12.79□□□□□ -0.36
CLPB-208ENST00000538021 PLCB4Q15147 1175 aa12.79□□□□□ -0.36
CLPB-208ENST00000538021 ATAT1Q5SQI0 421 aa12.79□□□□□ -0.36
CLPB-208ENST00000538021 KANK3Q6NY19 840 aa12.79□□□□□ -0.36
CLPB-208ENST00000538021 KCNT2Q6UVM3 1135 aa12.79□□□□□ -0.36
CLPB-208ENST00000538021 CWC27Q6UX04 472 aaKnown RBP12.79□□□□□ -0.36
CLPB-208ENST00000538021 NME8Q8N427 588 aa12.79□□□□□ -0.36
CLPB-208ENST00000538021 DTWD2Q8NBA8 298 aa12.79□□□□□ -0.36
CLPB-208ENST00000538021 TMEM87AQ8NBN3 555 aa12.79□□□□□ -0.36
CLPB-208ENST00000538021 PCYT2Q99447 389 aa12.79□□□□□ -0.36
CLPB-208ENST00000538021 FBXL21Q9UKT6 434 aa12.79□□□□□ -0.36
CLPB-208ENST00000538021 ST3GAL5Q9UNP4 418 aa12.79□□□□□ -0.36
CLPB-208ENST00000538021 ZFHX4Q86UP3 3567 aa12.79□□□□□ -0.36
CLPB-208ENST00000538021 SMIM35A0A1B0GVV1 85 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 C9IYK1 514 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 STK25O00506 426 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 GPR182O15218 404 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 CLASP2O75122 1294 aaKnown RBP12.78□□□□□ -0.36
CLPB-208ENST00000538021 NPR3P17342 541 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 ITGB5P18084 799 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 PPM1AP35813 382 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 PUM1Q14671 1186 aaKnown RBP eCLIP12.78□□□□□ -0.36
CLPB-208ENST00000538021 ODR4Q5SWX8 454 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 MTHFD1LQ6UB35 978 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 LRRC55Q6ZSA7 311 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 MRPL43Q8N983 215 aaKnown RBP12.78□□□□□ -0.36
CLPB-208ENST00000538021 ZNF558Q96NG5 402 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 CNTNAP3BQ96NU0 1288 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 PPP1R16BQ96T49 567 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 RTP3Q9BQQ7 232 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 CNTNAP3Q9BZ76 1288 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 CDHR5Q9HBB8 845 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 JPH1Q9HDC5 661 aaPredicted RBP12.78□□□□□ -0.36
CLPB-208ENST00000538021 CYP26B1Q9NR63 512 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 TMEM161AQ9NX61 479 aa12.78□□□□□ -0.36
CLPB-208ENST00000538021 C2orf71A6NGG8 1288 aa12.77□□□□□ -0.37
CLPB-208ENST00000538021 PIK3CDO00329 1044 aa12.77□□□□□ -0.37
CLPB-208ENST00000538021 MEIS2O14770 477 aa12.77□□□□□ -0.37
CLPB-208ENST00000538021 EOMESO95936 686 aa12.77□□□□□ -0.37
CLPB-208ENST00000538021 KIAA1841Q6NSI8 718 aa12.77□□□□□ -0.37
CLPB-208ENST00000538021 ABI1Q8IZP0 508 aa12.77□□□□□ -0.37
CLPB-208ENST00000538021 SIX5Q8N196 739 aa12.77□□□□□ -0.37
CLPB-208ENST00000538021 TMEM40Q8WWA1 233 aa12.77□□□□□ -0.37
CLPB-208ENST00000538021 ACSF2Q96CM8 615 aaPredicted RBP12.77□□□□□ -0.37
CLPB-208ENST00000538021 TMEM117Q9H0C3 514 aa12.77□□□□□ -0.37
CLPB-208ENST00000538021 SEMA4AQ9H3S1 761 aa12.77□□□□□ -0.37
CLPB-208ENST00000538021 SPG21Q9NZD8 308 aa12.77□□□□□ -0.37
CLPB-208ENST00000538021 USTQ9Y2C2 406 aa12.77□□□□□ -0.37
CLPB-208ENST00000538021 R4GN57 208 aa12.77□□□□□ -0.37
CLPB-208ENST00000538021 NCOR2Q9Y618 2525 aa12.76□□□□□ -0.37
CLPB-208ENST00000538021 IFIT3O14879 490 aaKnown RBP12.76□□□□□ -0.37
CLPB-208ENST00000538021 RFX1P22670 979 aa12.76□□□□□ -0.37
CLPB-208ENST00000538021 KLRC1P26715 233 aa12.76□□□□□ -0.37
CLPB-208ENST00000538021 STAT5BP51692 787 aa12.76□□□□□ -0.37
CLPB-208ENST00000538021 TDGQ13569 410 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms