RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 CNOT10Q9H9A5 744 aaKnown RBP11.58□□□□□ -0.56
RTN3-208ENST00000537981 RTCBQ9Y3I0 505 aaKnown RBP11.58□□□□□ -0.56
RTN3-208ENST00000537981 FLT4P35916 1363 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 A0A0G2JS52 829 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 GRID2IPA4D2P6 1211 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 ATP5J2-PTCD1G3V325 749 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 PFDN1O60925 122 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 PTCD1O75127 700 aaKnown RBP11.58□□□□□ -0.56
RTN3-208ENST00000537981 FLOT1O75955 427 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 ADCY1Q08828 1119 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 DIXDC1Q155Q3 683 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 AMHR2Q16671 573 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 LRRC24Q50LG9 513 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 MEI1Q5TIA1 1274 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 TTI2Q6NXR4 508 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 TRAPPC9Q96Q05 1148 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 DENND2DQ9H6A0 471 aaPredicted RBP11.58□□□□□ -0.56
RTN3-208ENST00000537981 PARP4Q9UKK3 1724 aaKnown RBP11.57□□□□□ -0.56
RTN3-208ENST00000537981 PALM3A6NDB9 673 aaPredicted RBP11.57□□□□□ -0.56
RTN3-208ENST00000537981 ABLIM1O14639 778 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 CEP104O60308 925 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 SUPT3HO75486 399 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 NEK3P51956 506 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 CNGA2Q16280 664 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 C4orf46Q504U0 113 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 SOGA3Q5TF21 947 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 OLFML2BQ68BL8 750 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 CACNA2D4Q7Z3S7 1137 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 ADAT2Q7Z6V5 191 aaKnown RBP11.57□□□□□ -0.56
RTN3-208ENST00000537981 LCA5Q86VQ0 697 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 ECHDC2Q86YB7 292 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.57□□□□□ -0.56
RTN3-208ENST00000537981 CSGALNACT2Q8N6G5 542 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 ATP8B4Q8TF62 1192 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 PTPRN2Q92932 1015 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 AGBL1Q96MI9 1066 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 SCOCQ9UIL1 159 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 SPATA31A3Q5VYP0 1347 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 MAGEA13PA6NCF6 341 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 TRIM75PA6NK02 468 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 GPAA1O43292 621 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 LCA5LO95447 670 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 CCNB1P14635 433 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 ADORA1P30542 326 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 GBP1P32455 592 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 PTGDRQ13258 359 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 ASTE1Q2TB18 679 aaPredicted RBP11.57□□□□□ -0.56
RTN3-208ENST00000537981 KHDC1Q4VXA5 237 aaKnown RBP11.57□□□□□ -0.56
RTN3-208ENST00000537981 RASIP1Q5U651 963 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 HGSNATQ68CP4 663 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 ANKRD40Q6AI12 368 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 ZNF280DQ6N043 979 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 ATG9AQ7Z3C6 839 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 CYP4X1Q8N118 509 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 RNF10Q8N5U6 811 aaKnown RBP11.57□□□□□ -0.56
RTN3-208ENST00000537981 TBC1D16Q8TBP0 767 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 NOC4LQ9BVI4 516 aaKnown RBP11.57□□□□□ -0.56
RTN3-208ENST00000537981 MYLK2Q9H1R3 596 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 FOXP1Q9H334 677 aaPredicted RBP11.57□□□□□ -0.56
RTN3-208ENST00000537981 MMRN2Q9H8L6 949 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 DDX21Q9NR30 783 aaKnown RBP eCLIP11.57□□□□□ -0.56
RTN3-208ENST00000537981 INIPQ9NRY2 104 aa11.57□□□□□ -0.56
RTN3-208ENST00000537981 SOS2Q07890 1332 aaPredicted RBP11.56□□□□□ -0.56
RTN3-208ENST00000537981 BHMG1C9JSJ3 638 aaPredicted RBP11.56□□□□□ -0.56
RTN3-208ENST00000537981 NVLO15381 856 aaKnown RBP11.56□□□□□ -0.56
RTN3-208ENST00000537981 PJA2O43164 708 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 TJP3O95049 919 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 UNC5CO95185 931 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 CYP11B2P19099 503 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 EEF1GP26641 437 aaKnown RBP11.56□□□□□ -0.56
RTN3-208ENST00000537981 MTIF2P46199 727 aaKnown RBP11.56□□□□□ -0.56
RTN3-208ENST00000537981 TNNC1P63316 161 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 ARID5AQ03989 594 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 CBX3Q13185 183 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 BTG3Q14201 252 aaPredicted RBP11.56□□□□□ -0.56
RTN3-208ENST00000537981 PDIA6Q15084 440 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 TMEM67Q5HYA8 995 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 IRGCQ6NXR0 463 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 KCNN1Q92952 543 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 ABTB1Q969K4 478 aaPredicted RBP11.56□□□□□ -0.56
RTN3-208ENST00000537981 DTNBP1Q96EV8 351 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 PIF1Q9H611 641 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 INTUQ9ULD6 942 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 GNEQ9Y223 722 aaKnown RBP11.56□□□□□ -0.56
RTN3-208ENST00000537981 LAMB4A4D0S4 1761 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 CETN3O15182 167 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 RTP1P59025 263 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 CUL1Q13616 776 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 SLC29A2Q14542 456 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 TNIP1Q15025 636 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 TDRD12Q587J7 1177 aaKnown RBP11.56□□□□□ -0.56
RTN3-208ENST00000537981 ZNF449Q6P9G9 518 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 NPAS4Q8IUM7 802 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 DTX3LQ8TDB6 740 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 SCFD2Q8WU76 684 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 SCG3Q8WXD2 468 aaKnown RBP11.56□□□□□ -0.56
RTN3-208ENST00000537981 TUBGCP5Q96RT8 1024 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 SPATA16Q9BXB7 569 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 VCXQ9H320 206 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 RXFP1Q9HBX9 757 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms