RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 DCTN4Q9UJW0 460 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 USTQ9Y2C2 406 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 PMF1-BGLAPU3KQ54 211 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 ANKRD26Q9UPS8 1709 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 LAMA2P24043 3122 aaKnown RBP5.3□□□□□ -1.56
YBX3-205ENST00000536107 RNMTO43148 476 aaKnown RBP5.29□□□□□ -1.56
YBX3-205ENST00000536107 BBOX1O75936 387 aa5.29□□□□□ -1.56
YBX3-205ENST00000536107 PSMC4P43686 418 aa5.29□□□□□ -1.56
YBX3-205ENST00000536107 LACTBP83111 547 aaPredicted RBP5.29□□□□□ -1.56
YBX3-205ENST00000536107 DLX2Q07687 328 aaPredicted RBP5.29□□□□□ -1.56
YBX3-205ENST00000536107 LDLRAD1Q5T700 205 aa5.29□□□□□ -1.56
YBX3-205ENST00000536107 ALG1LQ6GMV1 187 aa5.29□□□□□ -1.56
YBX3-205ENST00000536107 SLCO6A1Q86UG4 719 aa5.29□□□□□ -1.56
YBX3-205ENST00000536107 AEBP1Q8IUX7 1158 aa5.29□□□□□ -1.56
YBX3-205ENST00000536107 DVL3Q92997 716 aaPredicted RBP5.29□□□□□ -1.56
YBX3-205ENST00000536107 CLMNQ96JQ2 1002 aa5.29□□□□□ -1.56
YBX3-205ENST00000536107 PTPN18Q99952 460 aa5.29□□□□□ -1.56
YBX3-205ENST00000536107 PRDM14Q9GZV8 571 aa5.29□□□□□ -1.56
YBX3-205ENST00000536107 EPHX3Q9H6B9 360 aa5.29□□□□□ -1.56
YBX3-205ENST00000536107 THEGQ9P2T0 379 aa5.29□□□□□ -1.56
YBX3-205ENST00000536107 FZD1Q9UP38 647 aa5.29□□□□□ -1.56
YBX3-205ENST00000536107 GPR55Q9Y2T6 319 aaPredicted RBP5.29□□□□□ -1.56
YBX3-205ENST00000536107 CORINQ9Y5Q5 1042 aa5.29□□□□□ -1.56
YBX3-205ENST00000536107 ABCC12Q96J65 1359 aa5.29□□□□□ -1.56
YBX3-205ENST00000536107 A0A1W2PQ45 241 aaPredicted RBP5.28□□□□□ -1.56
YBX3-205ENST00000536107 A0A1W2PQY0 241 aa5.28□□□□□ -1.56
YBX3-205ENST00000536107 FAM86C2PA6NEL3 165 aa5.28□□□□□ -1.56
YBX3-205ENST00000536107 FZD7O75084 574 aa5.28□□□□□ -1.56
YBX3-205ENST00000536107 SYPP08247 313 aa5.28□□□□□ -1.56
YBX3-205ENST00000536107 ZNF280AP59817 542 aaPredicted RBP5.28□□□□□ -1.56
YBX3-205ENST00000536107 HLFQ16534 295 aa5.28□□□□□ -1.56
YBX3-205ENST00000536107 NBPF9Q3BBW0 867 aa5.28□□□□□ -1.56
YBX3-205ENST00000536107 SULT6B1Q6IMI4 303 aa5.28□□□□□ -1.56
YBX3-205ENST00000536107 USP51Q70EK9 711 aa5.28□□□□□ -1.56
YBX3-205ENST00000536107 CARFQ8N187 725 aa5.28□□□□□ -1.56
YBX3-205ENST00000536107 DIS3LQ8TF46 1054 aaKnown RBP5.28□□□□□ -1.56
YBX3-205ENST00000536107 EAF1Q96JC9 268 aaPredicted RBP5.28□□□□□ -1.56
YBX3-205ENST00000536107 PUS7Q96PZ0 661 aaKnown RBP5.28□□□□□ -1.56
YBX3-205ENST00000536107 UIMC1Q96RL1 719 aa5.28□□□□□ -1.56
YBX3-205ENST00000536107 EYA3Q99504 573 aa5.28□□□□□ -1.56
YBX3-205ENST00000536107 CARD11Q9BXL7 1154 aa5.28□□□□□ -1.56
YBX3-205ENST00000536107 RIC1Q4ADV7 1423 aa5.28□□□□□ -1.56
YBX3-205ENST00000536107 HEG1Q9ULI3 1381 aa5.28□□□□□ -1.56
YBX3-205ENST00000536107 ABCC4O15439 1325 aa5.27□□□□□ -1.57
YBX3-205ENST00000536107 FAM205AQ6ZU69 1335 aa5.27□□□□□ -1.57
YBX3-205ENST00000536107 MYPNQ86TC9 1320 aa5.27□□□□□ -1.57
YBX3-205ENST00000536107 CCL15-CCL14A0A0B4J2E2 113 aa5.27□□□□□ -1.57
YBX3-205ENST00000536107 VIL1P09327 827 aaKnown RBP5.27□□□□□ -1.57
YBX3-205ENST00000536107 CAPN2P17655 700 aa5.27□□□□□ -1.57
YBX3-205ENST00000536107 GPTP24298 496 aa5.27□□□□□ -1.57
YBX3-205ENST00000536107 TEFQ10587 303 aa5.27□□□□□ -1.57
YBX3-205ENST00000536107 CCL15Q16663 113 aa5.27□□□□□ -1.57
YBX3-205ENST00000536107 DDX46Q7L014 1031 aaKnown RBP5.27□□□□□ -1.57
YBX3-205ENST00000536107 NGEFQ8N5V2 710 aa5.27□□□□□ -1.57
YBX3-205ENST00000536107 RETREG2Q8NC44 543 aa5.27□□□□□ -1.57
YBX3-205ENST00000536107 NUP43Q8NFH3 380 aa5.27□□□□□ -1.57
YBX3-205ENST00000536107 PCED1AQ9H1Q7 454 aa5.27□□□□□ -1.57
YBX3-205ENST00000536107 WDR26Q9H7D7 661 aa5.27□□□□□ -1.57
YBX3-205ENST00000536107 POLKQ9UBT6 870 aa5.27□□□□□ -1.57
YBX3-205ENST00000536107 RTL9Q8NET4 1388 aa5.27□□□□□ -1.57
YBX3-205ENST00000536107 CACNA1GO43497 2377 aa5.27□□□□□ -1.57
YBX3-205ENST00000536107 SMIM22K7EJ46 135 aa5.26□□□□□ -1.57
YBX3-205ENST00000536107 PLATP00750 562 aa5.26□□□□□ -1.57
YBX3-205ENST00000536107 ATF2P15336 505 aa5.26□□□□□ -1.57
YBX3-205ENST00000536107 ENDOUP21128 410 aaKnown RBP5.26□□□□□ -1.57
YBX3-205ENST00000536107 LIG3P49916 1009 aa5.26□□□□□ -1.57
YBX3-205ENST00000536107 NHLH1Q02575 133 aa5.26□□□□□ -1.57
YBX3-205ENST00000536107 CCDC85BQ15834 202 aaPredicted RBP5.26□□□□□ -1.57
YBX3-205ENST00000536107 ZNF790Q6PG37 636 aa5.26□□□□□ -1.57
YBX3-205ENST00000536107 SPRED1Q7Z699 444 aa5.26□□□□□ -1.57
YBX3-205ENST00000536107 AGBL3Q8NEM8 1001 aa5.26□□□□□ -1.57
YBX3-205ENST00000536107 CHST13Q8NET6 341 aa5.26□□□□□ -1.57
YBX3-205ENST00000536107 SH3RF3Q8TEJ3 882 aaPredicted RBP5.26□□□□□ -1.57
YBX3-205ENST00000536107 OPTNQ96CV9 577 aa5.26□□□□□ -1.57
YBX3-205ENST00000536107 RNF38Q9H0F5 515 aa5.26□□□□□ -1.57
YBX3-205ENST00000536107 TTYH1Q9H313 450 aaPredicted RBP5.26□□□□□ -1.57
YBX3-205ENST00000536107 C11orf49Q9H6J7 331 aa5.26□□□□□ -1.57
YBX3-205ENST00000536107 SCN7AQ01118 1682 aa5.25□□□□□ -1.57
YBX3-205ENST00000536107 TLR2O60603 784 aa5.25□□□□□ -1.57
YBX3-205ENST00000536107 TFE3P19532 575 aaPredicted RBP5.25□□□□□ -1.57
YBX3-205ENST00000536107 GTF2A2P52657 109 aa5.25□□□□□ -1.57
YBX3-205ENST00000536107 PRKCZQ05513 592 aa5.25□□□□□ -1.57
YBX3-205ENST00000536107 SUSD4Q5VX71 490 aa5.25□□□□□ -1.57
YBX3-205ENST00000536107 APOBEC3FQ8IUX4 373 aaKnown RBP5.25□□□□□ -1.57
YBX3-205ENST00000536107 FAM43AQ8N2R8 423 aa5.25□□□□□ -1.57
YBX3-205ENST00000536107 BRI3BPQ8WY22 251 aa5.25□□□□□ -1.57
YBX3-205ENST00000536107 ERVK13-1Q9NX77 482 aa5.25□□□□□ -1.57
YBX3-205ENST00000536107 CPA4Q9UI42 421 aa5.25□□□□□ -1.57
YBX3-205ENST00000536107 TSC22D4Q9Y3Q8 395 aa5.25□□□□□ -1.57
YBX3-205ENST00000536107 MUC6Q6W4X9 2439 aa5.24□□□□□ -1.57
YBX3-205ENST00000536107 ADCY3O60266 1144 aa5.24□□□□□ -1.57
YBX3-205ENST00000536107 MAPK8P45983 427 aa5.24□□□□□ -1.57
YBX3-205ENST00000536107 RNF4P78317 190 aa5.24□□□□□ -1.57
YBX3-205ENST00000536107 GRAPQ13588 217 aa5.24□□□□□ -1.57
YBX3-205ENST00000536107 SUPT20HL1Q3ZLR7 823 aa5.24□□□□□ -1.57
YBX3-205ENST00000536107 KIF6Q6ZMV9 814 aa5.24□□□□□ -1.57
YBX3-205ENST00000536107 TMC4Q7Z404 712 aa5.24□□□□□ -1.57
YBX3-205ENST00000536107 PPP1R42Q7Z4L9 355 aa5.24□□□□□ -1.57
YBX3-205ENST00000536107 TMC3Q7Z5M5 1100 aa5.24□□□□□ -1.57
YBX3-205ENST00000536107 ANKRD13AQ8IZ07 590 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms