RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 IFIH1Q9BYX4 1025 aaKnown RBP18.51■□□□□ 0.55
ATL3-202ENST00000535789 TMEM150BA6NC51 233 aa18.5■□□□□ 0.55
ATL3-202ENST00000535789 BTBD18B2RXH4 712 aa18.5■□□□□ 0.55
ATL3-202ENST00000535789 EML1O00423 815 aa18.5■□□□□ 0.55
ATL3-202ENST00000535789 XBP1P17861 261 aa18.5■□□□□ 0.55
ATL3-202ENST00000535789 PRKCEQ02156 737 aa18.5■□□□□ 0.55
ATL3-202ENST00000535789 PPP4R3AQ6IN85 833 aa18.5■□□□□ 0.55
ATL3-202ENST00000535789 FAM117BQ6P1L5 589 aa18.5■□□□□ 0.55
ATL3-202ENST00000535789 KIAA0319LQ8IZA0 1049 aa18.5■□□□□ 0.55
ATL3-202ENST00000535789 MAFAQ8NHW3 353 aaPredicted RBP18.5■□□□□ 0.55
ATL3-202ENST00000535789 BBXQ8WY36 941 aaPredicted RBP18.5■□□□□ 0.55
ATL3-202ENST00000535789 WASF1Q92558 559 aa18.5■□□□□ 0.55
ATL3-202ENST00000535789 SEPT8Q92599 483 aa18.5■□□□□ 0.55
ATL3-202ENST00000535789 CEP89Q96ST8 783 aa18.5■□□□□ 0.55
ATL3-202ENST00000535789 CERS4Q9HA82 394 aa18.5■□□□□ 0.55
ATL3-202ENST00000535789 CDHR5Q9HBB8 845 aa18.5■□□□□ 0.55
ATL3-202ENST00000535789 PLXNA4Q9HCM2 1894 aa18.5■□□□□ 0.55
ATL3-202ENST00000535789 RFXAPO00287 272 aa18.49■□□□□ 0.55
ATL3-202ENST00000535789 TLL1O43897 1013 aa18.49■□□□□ 0.55
ATL3-202ENST00000535789 OATP04181 439 aa18.49■□□□□ 0.55
ATL3-202ENST00000535789 JAK3P52333 1124 aa18.49■□□□□ 0.55
ATL3-202ENST00000535789 SPIRE1Q08AE8 756 aa18.49■□□□□ 0.55
ATL3-202ENST00000535789 ZNF484Q5JVG2 852 aa18.49■□□□□ 0.55
ATL3-202ENST00000535789 DIS3L2Q8IYB7 885 aaKnown RBP18.49■□□□□ 0.55
ATL3-202ENST00000535789 MYOCDQ8IZQ8 938 aa18.49■□□□□ 0.55
ATL3-202ENST00000535789 TMEM40Q8WWA1 233 aa18.49■□□□□ 0.55
ATL3-202ENST00000535789 SAMM50Q9Y512 469 aa18.49■□□□□ 0.55
ATL3-202ENST00000535789 TRPV2Q9Y5S1 764 aa18.49■□□□□ 0.55
ATL3-202ENST00000535789 KDM3AQ9Y4C1 1321 aa18.49■□□□□ 0.55
ATL3-202ENST00000535789 CCNT1O60563 726 aaKnown RBP18.48■□□□□ 0.55
ATL3-202ENST00000535789 EFCAB14O75071 495 aa18.48■□□□□ 0.55
ATL3-202ENST00000535789 CD52P31358 61 aa18.48■□□□□ 0.55
ATL3-202ENST00000535789 SFNP31947 248 aa18.48■□□□□ 0.55
ATL3-202ENST00000535789 HTRA4P83105 476 aaPredicted RBP18.48■□□□□ 0.55
ATL3-202ENST00000535789 GUCY1B3Q02153 619 aa18.48■□□□□ 0.55
ATL3-202ENST00000535789 TSHZ1Q6ZSZ6 1077 aa18.48■□□□□ 0.55
ATL3-202ENST00000535789 MIER3Q7Z3K6 550 aa18.48■□□□□ 0.55
ATL3-202ENST00000535789 RC3H2Q9HBD1 1191 aaKnown RBP18.48■□□□□ 0.55
ATL3-202ENST00000535789 WRAP73Q9P2S5 460 aaPredicted RBP18.48■□□□□ 0.55
ATL3-202ENST00000535789 BRWD1Q9NSI6 2320 aa18.48■□□□□ 0.55
ATL3-202ENST00000535789 LINC01553A4QN01 128 aa18.47■□□□□ 0.55
ATL3-202ENST00000535789 GCFC2P16383 781 aaKnown RBP18.47■□□□□ 0.55
ATL3-202ENST00000535789 CLCN3P51790 818 aa18.47■□□□□ 0.55
ATL3-202ENST00000535789 PPP2R5CQ13362 524 aa18.47■□□□□ 0.55
ATL3-202ENST00000535789 TARBP2Q15633 366 aaKnown RBP18.47■□□□□ 0.55
ATL3-202ENST00000535789 RSPH3Q86UC2 560 aa18.47■□□□□ 0.55
ATL3-202ENST00000535789 CKAP2LQ8IYA6 745 aa18.47■□□□□ 0.55
ATL3-202ENST00000535789 BANK1Q8NDB2 785 aa18.47■□□□□ 0.55
ATL3-202ENST00000535789 RDM1Q8NG50 284 aa18.47■□□□□ 0.55
ATL3-202ENST00000535789 SP7Q8TDD2 431 aaPredicted RBP18.47■□□□□ 0.55
ATL3-202ENST00000535789 APBB2Q92870 758 aa18.47■□□□□ 0.55
ATL3-202ENST00000535789 PPP1R16BQ96T49 567 aa18.47■□□□□ 0.55
ATL3-202ENST00000535789 SH2D3AQ9BRG2 576 aa18.47■□□□□ 0.55
ATL3-202ENST00000535789 CELF4Q9BZC1 486 aaKnown RBP18.47■□□□□ 0.55
ATL3-202ENST00000535789 TMX1Q9H3N1 280 aa18.47■□□□□ 0.55
ATL3-202ENST00000535789 TCEAL9Q9UHQ7 104 aa18.47■□□□□ 0.55
ATL3-202ENST00000535789 LPXNO60711 386 aa18.46■□□□□ 0.55
ATL3-202ENST00000535789 RABEP1Q15276 862 aa18.46■□□□□ 0.55
ATL3-202ENST00000535789 TMEM266Q2M3C6 531 aa18.46■□□□□ 0.55
ATL3-202ENST00000535789 RTN4RL1Q86UN2 441 aaPredicted RBP18.46■□□□□ 0.55
ATL3-202ENST00000535789 LRRC71Q8N4P6 559 aa18.46■□□□□ 0.55
ATL3-202ENST00000535789 TOP1MTQ969P6 601 aa18.46■□□□□ 0.55
ATL3-202ENST00000535789 FAM167AQ96KS9 214 aa18.46■□□□□ 0.55
ATL3-202ENST00000535789 LLPHQ9BRT6 129 aaKnown RBP18.46■□□□□ 0.55
ATL3-202ENST00000535789 RBM19Q9Y4C8 960 aaKnown RBP18.46■□□□□ 0.55
ATL3-202ENST00000535789 MUC3AQ02505 3323 aa18.46■□□□□ 0.55
ATL3-202ENST00000535789 KIF28PB7ZC32 967 aa18.45■□□□□ 0.54
ATL3-202ENST00000535789 GPR32O75388 356 aa18.45■□□□□ 0.54
ATL3-202ENST00000535789 AMHP03971 560 aa18.45■□□□□ 0.54
ATL3-202ENST00000535789 VTNP04004 478 aa18.45■□□□□ 0.54
ATL3-202ENST00000535789 DRP2Q13474 957 aa18.45■□□□□ 0.54
ATL3-202ENST00000535789 IER5Q5VY09 327 aa18.45■□□□□ 0.54
ATL3-202ENST00000535789 CRIPAKQ8N1N5 446 aa18.45■□□□□ 0.54
ATL3-202ENST00000535789 TNPO1Q92973 898 aaKnown RBP18.45■□□□□ 0.54
ATL3-202ENST00000535789 ZSCAN31Q96LW9 406 aaPredicted RBP18.45■□□□□ 0.54
ATL3-202ENST00000535789 RAD9AQ99638 391 aa18.45■□□□□ 0.54
ATL3-202ENST00000535789 SH2B1Q9NRF2 756 aaPredicted RBP18.45■□□□□ 0.54
ATL3-202ENST00000535789 PADI3Q9ULW8 664 aa18.45■□□□□ 0.54
ATL3-202ENST00000535789 NOC2LQ9Y3T9 749 aaKnown RBP18.45■□□□□ 0.54
ATL3-202ENST00000535789 TBX3O15119 743 aa18.44■□□□□ 0.54
ATL3-202ENST00000535789 MGEA5O60502 916 aa18.44■□□□□ 0.54
ATL3-202ENST00000535789 RPLP2P05387 115 aaKnown RBP18.44■□□□□ 0.54
ATL3-202ENST00000535789 LINC00271P0C7V0 271 aa18.44■□□□□ 0.54
ATL3-202ENST00000535789 KIZQ2M2Z5 673 aa18.44■□□□□ 0.54
ATL3-202ENST00000535789 ANO5Q75V66 913 aa18.44■□□□□ 0.54
ATL3-202ENST00000535789 ARNTL2Q8WYA1 636 aa18.44■□□□□ 0.54
ATL3-202ENST00000535789 FAM20AQ96MK3 541 aa18.44■□□□□ 0.54
ATL3-202ENST00000535789 GAS2L1Q99501 681 aaPredicted RBP18.44■□□□□ 0.54
ATL3-202ENST00000535789 OSMRQ99650 979 aa18.44■□□□□ 0.54
ATL3-202ENST00000535789 ZBED2Q9BTP6 218 aa18.44■□□□□ 0.54
ATL3-202ENST00000535789 BRMS1Q9HCU9 246 aa18.44■□□□□ 0.54
ATL3-202ENST00000535789 ERVK-5Q9HDB9 667 aa18.44■□□□□ 0.54
ATL3-202ENST00000535789 PRDM6Q9NQX0 595 aa18.44■□□□□ 0.54
ATL3-202ENST00000535789 SEPT9Q9UHD8 586 aaPredicted RBP18.44■□□□□ 0.54
ATL3-202ENST00000535789 SQORQ9Y6N5 450 aa18.44■□□□□ 0.54
ATL3-202ENST00000535789 MYO7AQ13402 2215 aa18.43■□□□□ 0.54
ATL3-202ENST00000535789 ENPP3O14638 875 aa18.43■□□□□ 0.54
ATL3-202ENST00000535789 UPP2O95045 317 aa18.43■□□□□ 0.54
ATL3-202ENST00000535789 PLA2G4FQ68DD2 849 aa18.43■□□□□ 0.54
ATL3-202ENST00000535789 FAM228AQ86W67 206 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms