RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 TMEM253P0C7T8 217 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 ITGB5P18084 799 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 YY1P25490 414 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 ERVFC1P60507 584 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 SRSF3P84103 164 aaKnown RBP4.4□□□□□ -1.71
SNHG1-202ENST00000535689 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 IQSEC1Q6DN90 963 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 RNF180Q86T96 592 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 OSTM1Q86WC4 334 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 FAM126BQ8IXS8 530 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 PRPF38AQ8NAV1 312 aaKnown RBP4.4□□□□□ -1.71
SNHG1-202ENST00000535689 BHLHE22Q8NFJ8 381 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-202ENST00000535689 TMEM209Q96SK2 561 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 PUS7LQ9H0K6 701 aaKnown RBP4.4□□□□□ -1.71
SNHG1-202ENST00000535689 SP110Q9HB58 689 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 HOMER2Q9NSB8 354 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 RIC8BQ9NVN3 520 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 DTLQ9NZJ0 730 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 PALD1Q9ULE6 856 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 ASB1Q9Y576 335 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 SPO11Q9Y5K1 396 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 ARHGAP35Q9NRY4 1499 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 ARHGAP23Q9P227 1491 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 ARHGAP31Q2M1Z3 1444 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 FYCO1Q9BQS8 1478 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 LRRC10BA6NIK2 292 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 RFXAPO00287 272 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 ARNTLO00327 626 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 SGSM2O43147 1006 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 PAX4O43316 350 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 GLRX3O76003 335 aaKnown RBP4.39□□□□□ -1.71
SNHG1-202ENST00000535689 FKBP9O95302 570 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 SDHAP31040 664 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 TRHRP34981 398 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-202ENST00000535689 PRR5P85299 388 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 STRN3Q13033 797 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 TUSC3Q13454 348 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 IDI1Q13907 227 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 ZNF460Q14592 562 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 ATP13A4Q4VNC1 1196 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 GJC2Q5T442 439 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-202ENST00000535689 MCTP1Q6DN14 999 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 VASNQ6EMK4 673 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 PKN3Q6P5Z2 889 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 RPTNQ6XPR3 784 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 ZNF662Q6ZS27 426 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 FKBP9P1Q75LS8 142 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 MIB1Q86YT6 1006 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 CISD2Q8N5K1 135 aaKnown RBP4.39□□□□□ -1.71
SNHG1-202ENST00000535689 KCNN1Q92952 543 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 PAWRQ96IZ0 340 aaKnown RBP4.39□□□□□ -1.71
SNHG1-202ENST00000535689 MAML3Q96JK9 1138 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 FAM84AQ96KN4 292 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 WNT8AQ9H1J5 351 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 CDIP1Q9H305 208 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 KLHL14Q9P2G3 628 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 ARHGAP28Q9P2N2 729 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 SYNPO2Q9UMS6 1093 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 WASHC2AQ641Q2 1341 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 COL16A1Q07092 1604 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-202ENST00000535689 AHDC1Q5TGY3 1603 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-202ENST00000535689 PIK3R4Q99570 1358 aa4.39□□□□□ -1.71
SNHG1-202ENST00000535689 ERVK-7P63135 1459 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 CCDC141Q6ZP82 1450 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 MBD5Q9P267 1494 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 TCRBV5S2A0A599 114 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 NOTOA8MTQ0 251 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 NFIBO00712 420 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 SCDO00767 359 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 SLC27A2O14975 620 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 FARP2O94887 1054 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-202ENST00000535689 CHGBP05060 677 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 MSL3P1P0C860 447 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 CYP2C8P10632 490 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 COL6A2P12110 1019 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 FAHP16930 419 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 TAL1P17542 331 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-202ENST00000535689 PTPN1P18031 435 aaKnown RBP4.38□□□□□ -1.71
SNHG1-202ENST00000535689 KIF11P52732 1056 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 JAM2P57087 298 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 PHC1P78364 1004 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 MAP3K12Q12852 859 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 LRRC32Q14392 662 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 PKN1Q16512 942 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 PLEKHN1Q494U1 663 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-202ENST00000535689 PAN2Q504Q3 1202 aaKnown RBP4.38□□□□□ -1.71
SNHG1-202ENST00000535689 FRMD7Q6ZUT3 714 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 TMC6Q7Z403 805 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 ZNF605Q86T29 641 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 PTRH1Q86Y79 214 aaKnown RBP4.38□□□□□ -1.71
SNHG1-202ENST00000535689 TMEM151BQ8IW70 566 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 AFAP1L2Q8N4X5 818 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 TTLL6Q8N841 843 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 SMC1BQ8NDV3 1235 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 RSAD2Q8WXG1 361 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 RPGRQ92834 1020 aaKnown RBP4.38□□□□□ -1.71
SNHG1-202ENST00000535689 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 MENTQ9BUN1 341 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 NSUN3Q9H649 340 aaKnown RBP4.38□□□□□ -1.71
SNHG1-202ENST00000535689 CBLCQ9ULV8 474 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms