RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 RSPH10B2B2RC85 870 aa17.27■□□□□ 0.35
MCF2L-232ENST00000535094 EXOC3O60645 756 aa17.27■□□□□ 0.35
MCF2L-232ENST00000535094 RSPH10BP0C881 870 aa17.27■□□□□ 0.35
MCF2L-232ENST00000535094 HOXA13P31271 388 aaPredicted RBP17.27■□□□□ 0.35
MCF2L-232ENST00000535094 CALCOCO2Q13137 446 aa17.27■□□□□ 0.35
MCF2L-232ENST00000535094 PPP4R3AQ6IN85 833 aa17.27■□□□□ 0.35
MCF2L-232ENST00000535094 NSRP1Q9H0G5 558 aaKnown RBP17.27■□□□□ 0.35
MCF2L-232ENST00000535094 ACTR5Q9H9F9 607 aaPredicted RBP17.27■□□□□ 0.35
MCF2L-232ENST00000535094 CNOT8Q9UFF9 292 aaKnown RBP17.27■□□□□ 0.35
MCF2L-232ENST00000535094 FER1L4A9Z1Z3 1794 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 PJA2O43164 708 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 TAL1P17542 331 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-232ENST00000535094 CDC25CP30307 473 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 HNRNPH3P31942 346 aaKnown RBP17.26■□□□□ 0.35
MCF2L-232ENST00000535094 RPAINQ86UA6 219 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 ADGRF4Q8IZF3 695 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 SCFD1Q8WVM8 642 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 PRMT1Q99873 361 aaKnown RBP17.26■□□□□ 0.35
MCF2L-232ENST00000535094 FAM114A2Q9NRY5 505 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 AKAP11Q9UKA4 1901 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 NOL4O94818 638 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 PLCG2P16885 1265 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 ELF1P32519 619 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 SCTRP47872 440 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 GRIPAP1Q4V328 841 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 KIF2BQ8N4N8 673 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 PCIF1Q9H4Z3 704 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 PLCB1Q9NQ66 1216 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 CASP5P51878 434 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 SMTNP53814 917 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 TPCN2Q8NHX9 752 aa17.26■□□□□ 0.35
MCF2L-232ENST00000535094 COL5A2P05997 1499 aaPredicted RBP17.25■□□□□ 0.35
MCF2L-232ENST00000535094 HSPA9P38646 679 aaKnown RBP17.25■□□□□ 0.35
MCF2L-232ENST00000535094 KCNJ1P48048 391 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 CACNB3P54284 484 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 TRIM68Q6AZZ1 485 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 AADACL2Q6P093 401 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 CEP63Q96MT8 703 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 TCEAL9Q9UHQ7 104 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 CCDC169A6NNP5 214 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 FSBPO95073 299 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 NR3C1P04150 777 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 NEFHP12036 1026 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 PSMC6P62333 389 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 FAM186BQ8IYM0 893 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 DAGLBQ8NCG7 672 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 NEDD1Q8NHV4 660 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 RGL1Q9NZL6 768 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 FRMD4BQ9Y2L6 1034 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 KDM3AQ9Y4C1 1321 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 A0A1W2PRG0 241 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 CTTNQ14247 550 aaKnown RBP17.25■□□□□ 0.35
MCF2L-232ENST00000535094 SLC29A2Q14542 456 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 SEL1L2Q5TEA6 688 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 NSMFQ6X4W1 530 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 TRIM59Q8IWR1 403 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 SLC35G2Q8TBE7 412 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 XPO6Q96QU8 1125 aaKnown RBP17.25■□□□□ 0.35
MCF2L-232ENST00000535094 ADAM33Q9BZ11 813 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 EDEM3Q9BZQ6 932 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.25■□□□□ 0.35
MCF2L-232ENST00000535094 CEP83Q9Y592 693 aa17.25■□□□□ 0.35
MCF2L-232ENST00000535094 KCPQ6ZWJ8 1503 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 CCDC188H7C350 402 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 DNM1LO00429 736 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 KCNA1Q09470 495 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 PIK3R5Q8WYR1 880 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 RUBCNQ92622 972 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 SGSM3Q96HU1 749 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 DNAJC12Q9UKB3 198 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 TPX2Q9ULW0 747 aaKnown RBP17.24■□□□□ 0.35
MCF2L-232ENST00000535094 BZW2Q9Y6E2 419 aaKnown RBP17.24■□□□□ 0.35
MCF2L-232ENST00000535094 SHBGP04278 402 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 PMS2P54278 862 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 DRAP1Q14919 205 aaPredicted RBP17.24■□□□□ 0.35
MCF2L-232ENST00000535094 NUGGCQ68CJ6 796 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 SPICE1Q8N0Z3 855 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 KCNV2Q8TDN2 545 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 LBHD1Q9BQE6 289 aaPredicted RBP17.24■□□□□ 0.35
MCF2L-232ENST00000535094 L3MBTL1Q9Y468 752 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 EVI5O60447 810 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 TRIM37O94972 964 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 SF3B3Q15393 1217 aaKnown RBP17.24■□□□□ 0.35
MCF2L-232ENST00000535094 KNOP1Q1ED39 458 aaKnown RBP17.24■□□□□ 0.35
MCF2L-232ENST00000535094 FBXO25Q8TCJ0 367 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 OSBPL7Q9BZF2 842 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 NR2E1Q9Y466 385 aa17.24■□□□□ 0.35
MCF2L-232ENST00000535094 NMT1P30419 496 aaKnown RBP17.23■□□□□ 0.35
MCF2L-232ENST00000535094 IFI35P80217 286 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-232ENST00000535094 ZC2HC1CQ53FD0 456 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-232ENST00000535094 LRRC34Q8IZ02 419 aa17.23■□□□□ 0.35
MCF2L-232ENST00000535094 FUKQ8N0W3 1084 aa17.23■□□□□ 0.35
MCF2L-232ENST00000535094 NAP1L3Q99457 506 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-232ENST00000535094 BCAS3Q9H6U6 928 aa17.23■□□□□ 0.35
MCF2L-232ENST00000535094 PON1P27169 355 aa17.23■□□□□ 0.35
MCF2L-232ENST00000535094 UAP1Q16222 522 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-232ENST00000535094 CCDC50Q8IVM0 306 aa17.23■□□□□ 0.35
MCF2L-232ENST00000535094 KLHL29Q96CT2 875 aa17.23■□□□□ 0.35
MCF2L-232ENST00000535094 REEP2Q9BRK0 252 aa17.23■□□□□ 0.35
MCF2L-232ENST00000535094 DHX36Q9H2U1 1008 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms