RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 RPS6KB1P23443 525 aa11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 ARHGAP4P98171 946 aa11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 ITGB3BPQ13352 177 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 BLOC1S2Q6QNY1 142 aa11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 RUFY4Q6ZNE9 571 aa11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 BRF1Q92994 677 aa11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 PPP2R3CQ969Q6 453 aa11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 AGO4Q9HCK5 861 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 JPH1Q9HDC5 661 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 TMEM260Q9NX78 707 aa11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 RWDD3Q9Y3V2 267 aa11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 CACNA1BQ00975 2339 aa11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 IGLV3-22A0A075B6J6 115 aa11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 DHX15O43143 795 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 GALR2O43603 387 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 EDIL3O43854 480 aa11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 REC8O95072 547 aa11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 CTSHP09668 335 aa11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 ACTR2P61160 394 aa11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 PPFIA1Q13136 1202 aa11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 CBX2Q14781 532 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 GRIK4Q16099 956 aa11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 TAF2Q6P1X5 1199 aa11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 PLPPR4Q7Z2D5 763 aa11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 ZBTB33Q86T24 672 aa11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 SMRP1Q8NCR6 262 aa11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 APBB2Q92870 758 aa11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 PHF7Q9BWX1 381 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 PKD2L1Q9P0L9 805 aa11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 USP15Q9Y4E8 981 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-203ENST00000534830 VPS13AQ96RL7 3174 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 RRN3P2A6NIE6 340 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 FAM86B1E9PN63 330 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 PDGFBP01127 241 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 MMP1P03956 469 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 FAM86B2P0C5J1 330 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 INSRRP14616 1297 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 IFNAR1P17181 557 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 MARK3P27448 753 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 PSMA5P28066 241 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 PDIA3P30101 505 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 COASYQ13057 564 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 TOB2Q14106 344 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 PLCB4Q15147 1175 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 ABHD15Q6UXT9 468 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 GLG1Q92896 1179 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 SDF4Q9BRK5 362 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 ZSWIM6Q9HCJ5 1215 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 CLEC1BQ9P126 229 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 TUBE1Q9UJT0 475 aa11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 BARX2Q9UMQ3 279 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-203ENST00000534830 DMDP11532 3685 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 ADGRA3Q8IWK6 1321 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 CCNE2O96020 404 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 LINC00271P0C7V0 271 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 CIITAP33076 1130 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 NBL1P41271 181 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 NRIP1P48552 1158 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 STAT5BP51692 787 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 NUBP1P53384 320 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 FGD1P98174 961 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 BTG3Q14201 252 aaPredicted RBP11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 LPIN1Q14693 890 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 PTPN21Q16825 1174 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 JAKMIP3Q5VZ66 844 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 MCTP2Q6DN12 878 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 RUFY3Q7L099 469 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 ADGRD2Q7Z7M1 963 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 RBM23Q86U06 439 aaKnown RBP11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 ADSSL1Q8N142 457 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 EFHBQ8N7U6 833 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 DNAJB3Q8WWF6 145 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 PHKBQ93100 1093 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 NKD2Q969F2 451 aaPredicted RBP11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 RIPOR3Q96MK2 946 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 RNF26Q9BY78 433 aaPredicted RBP11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 PLAGL2Q9UPG8 496 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 PCDHA2Q9Y5H9 948 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 SQORQ9Y6N5 450 aa11.45□□□□□ -0.58
CLSTN3-203ENST00000534830 RPLP2P05387 115 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 GNA11P29992 359 aa11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 SLC26A2P50443 739 aa11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 CAMK1Q14012 370 aa11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 FBXO47Q5MNV8 452 aa11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 RSPH3Q86UC2 560 aa11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 PLA2G4DQ86XP0 818 aa11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 CRIPAKQ8N1N5 446 aa11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 CCDC12Q8WUD4 166 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 CLP1Q92989 425 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 LENG9Q96B70 501 aa11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 ZBTB10Q96DT7 871 aa11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 PLVAPQ9BX97 442 aa11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 TM6SF1Q9BZW5 370 aa11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 AZI2Q9H6S1 392 aa11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 RC3H2Q9HBD1 1191 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 C6orf50Q9HD87 102 aa11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 NAP1L2Q9ULW6 460 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 CDY2AQ9Y6F7 541 aa11.44□□□□□ -0.58
CLSTN3-203ENST00000534830 KDM3AQ9Y4C1 1321 aa11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 SMIM35A0A1B0GVV1 85 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms