RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 CTSHP09668 335 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 CKBP12277 381 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 ACTN1P12814 892 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 HOXD8P13378 290 aaPredicted RBP10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 SELPP16109 830 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 GNA11P29992 359 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 RABGGTBP53611 331 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 AK2P54819 239 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 IGBP1P78318 339 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 SMAD3P84022 425 aaKnown RBP10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 AP3B2Q13367 1082 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 CEP55Q53EZ4 464 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 LRRC8DQ7L1W4 858 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 TRMT1LQ7Z2T5 733 aaKnown RBP10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 SESTD1Q86VW0 696 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 PLA2G4DQ86XP0 818 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 RNF135Q8IUD6 432 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 NECAB1Q8N987 351 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 BICD2Q8TD16 824 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 SEPT1Q8WYJ6 367 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 HERVK_113Q902F9 699 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 DHX38Q92620 1227 aaKnown RBP10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 WNT8BQ93098 351 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 AIFM3Q96NN9 605 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 CTAGE1Q96RT6 745 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 ZMYND12Q9H0C1 365 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 RNPEPQ9H4A4 650 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 JPH1Q9HDC5 661 aaPredicted RBP10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 MTMR10Q9NXD2 777 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 SLC9A2Q9UBY0 812 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 TCEAL9Q9UHQ7 104 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 TPCN1Q9ULQ1 816 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 NID2Q14112 1375 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 GSTTP1A0A1W2PQM5 241 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 BACH1O14867 736 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 DEXIO95424 95 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 GNAT1P11488 350 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 SREBF1P36956 1147 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 NEK4P51957 841 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 EVCP57679 992 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 SCRN1Q12765 414 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 PTK7Q13308 1070 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 AGERQ15109 404 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 PRR16Q569H4 304 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 PLA2G2CQ5R387 149 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 ZNF618Q5T7W0 954 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 ZNF511Q8NB15 262 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 CAGE1Q8TC20 777 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 AFAP1L1Q8TED9 768 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 TIFAQ96CG3 184 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 SEMA6BQ9H3T3 888 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 AZI2Q9H6S1 392 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 AGO4Q9HCK5 861 aaKnown RBP10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 MSRAQ9UJ68 235 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 KCNJ14Q9UNX9 436 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 SCN5AQ14524 2016 aa10.15□□□□□ -0.78
CCDC90B-219ENST00000534753 SZT2Q5T011 3432 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 ESYT2A0FGR8 921 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 FAM86B1E9PN63 330 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 MAFGO15525 162 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 EIF5BO60841 1220 aaKnown RBP10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 CDKL5O76039 1030 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 FAM86B2P0C5J1 330 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 MYOGP15173 224 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 ATP2A2P16615 1042 aaKnown RBP10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 RFC2P35250 354 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 KCNJ6P48051 423 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 ANAPC15P60006 121 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 ACTR2P61160 394 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 PPFIA1Q13136 1202 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 ITGB3BPQ13352 177 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 ANKRD1Q15327 319 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 PHTF2Q8N3S3 785 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 LMBR1Q8WVP7 490 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 MYLIPQ8WY64 445 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 GUCD1Q96NT3 240 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 CDX2Q99626 313 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 ZNF577Q9BSK1 485 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 PBX4Q9BYU1 374 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 NKX2-4Q9H2Z4 354 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 TTYH1Q9H313 450 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 SMARCAD1Q9H4L7 1026 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 ERAP1Q9NZ08 941 aa10.14□□□□□ -0.79
CCDC90B-219ENST00000534753 RSPH10B2B2RC85 870 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 IPO5O00410 1097 aaKnown RBP10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 MEIS1O00470 390 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 PFKFB2O60825 505 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 NBNO60934 754 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 ATG7O95352 703 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 PFKMP08237 780 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 RSPH10BP0C881 870 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 GRIK4Q16099 956 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 RASIP1Q5U651 963 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 MCTP2Q6DN12 878 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 FAM117BQ6P1L5 589 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 TMCO2Q7Z6W1 182 aaPredicted RBP10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 SERINC5Q86VE9 423 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 CKAP2LQ8IYA6 745 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 BLIDQ8IZY5 108 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 TRAPPC12Q8WVT3 735 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms