RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 PCDHA12Q9UN75 941 aa24.01■■□□□ 1.43
PKP3-211ENST00000534401 CDY2AQ9Y6F7 541 aa24.01■■□□□ 1.43
PKP3-211ENST00000534401 MYO9BQ13459 2157 aa24.01■■□□□ 1.43
PKP3-211ENST00000534401 ATP2A2P16615 1042 aaKnown RBP24■■□□□ 1.43
PKP3-211ENST00000534401 QARSP47897 775 aaKnown RBP24■■□□□ 1.43
PKP3-211ENST00000534401 TOB1P50616 345 aaPredicted RBP24■■□□□ 1.43
PKP3-211ENST00000534401 IKBKEQ14164 716 aa24■■□□□ 1.43
PKP3-211ENST00000534401 LPIN1Q14693 890 aa24■■□□□ 1.43
PKP3-211ENST00000534401 IER5Q5VY09 327 aa24■■□□□ 1.43
PKP3-211ENST00000534401 DEFB123Q8N688 67 aa24■■□□□ 1.43
PKP3-211ENST00000534401 HSD17B14Q9BPX1 270 aa24■■□□□ 1.43
PKP3-211ENST00000534401 TTYH1Q9H313 450 aaPredicted RBP24■■□□□ 1.43
PKP3-211ENST00000534401 IGKV6-21A0A0C4DH24 114 aa23.99■■□□□ 1.43
PKP3-211ENST00000534401 ZBBXA8MT70 800 aa23.99■■□□□ 1.43
PKP3-211ENST00000534401 PBX2P40425 430 aa23.99■■□□□ 1.43
PKP3-211ENST00000534401 RAB30Q15771 203 aa23.99■■□□□ 1.43
PKP3-211ENST00000534401 FAM43BQ6ZT52 329 aaPredicted RBP23.99■■□□□ 1.43
PKP3-211ENST00000534401 ANO5Q75V66 913 aa23.99■■□□□ 1.43
PKP3-211ENST00000534401 C4orf19Q8IY42 314 aa23.99■■□□□ 1.43
PKP3-211ENST00000534401 USP38Q8NB14 1042 aa23.99■■□□□ 1.43
PKP3-211ENST00000534401 SEPT8Q92599 483 aa23.99■■□□□ 1.43
PKP3-211ENST00000534401 APBB2Q92870 758 aa23.99■■□□□ 1.43
PKP3-211ENST00000534401 CELF4Q9BZC1 486 aaKnown RBP23.99■■□□□ 1.43
PKP3-211ENST00000534401 FAM49AQ9H0Q0 323 aaPredicted RBP23.99■■□□□ 1.43
PKP3-211ENST00000534401 SEMA6BQ9H3T3 888 aa23.99■■□□□ 1.43
PKP3-211ENST00000534401 TTC12Q9H892 705 aaPredicted RBP23.99■■□□□ 1.43
PKP3-211ENST00000534401 WRAP73Q9P2S5 460 aaPredicted RBP23.99■■□□□ 1.43
PKP3-211ENST00000534401 SMC3Q9UQE7 1217 aa23.99■■□□□ 1.43
PKP3-211ENST00000534401 PCDHA11Q9Y5I1 949 aa23.99■■□□□ 1.43
PKP3-211ENST00000534401 TRPV2Q9Y5S1 764 aa23.99■■□□□ 1.43
PKP3-211ENST00000534401 RBAK-RBAKDNI3L0D1 243 aa23.98■■□□□ 1.43
PKP3-211ENST00000534401 DKC1O60832 514 aaKnown RBP eCLIP23.98■■□□□ 1.43
PKP3-211ENST00000534401 Q7L0L9 218 aa23.98■■□□□ 1.43
PKP3-211ENST00000534401 BANK1Q8NDB2 785 aa23.98■■□□□ 1.43
PKP3-211ENST00000534401 SNX21Q969T3 373 aa23.98■■□□□ 1.43
PKP3-211ENST00000534401 MARCH6O60337 910 aa23.97■■□□□ 1.43
PKP3-211ENST00000534401 SLITRK3O94933 977 aa23.97■■□□□ 1.43
PKP3-211ENST00000534401 LYPLA2O95372 231 aa23.97■■□□□ 1.43
PKP3-211ENST00000534401 MCM7P33993 719 aa23.97■■□□□ 1.43
PKP3-211ENST00000534401 TTC3P53804 2025 aa23.97■■□□□ 1.43
PKP3-211ENST00000534401 TTC38Q5R3I4 469 aa23.97■■□□□ 1.43
PKP3-211ENST00000534401 TSHZ1Q6ZSZ6 1077 aa23.97■■□□□ 1.43
PKP3-211ENST00000534401 HERC6Q8IVU3 1022 aa23.97■■□□□ 1.43
PKP3-211ENST00000534401 ZNF710Q8N1W2 664 aa23.97■■□□□ 1.43
PKP3-211ENST00000534401 INTS4Q96HW7 963 aaKnown RBP23.97■■□□□ 1.43
PKP3-211ENST00000534401 AGO3Q9H9G7 860 aaKnown RBP23.97■■□□□ 1.43
PKP3-211ENST00000534401 YBX2Q9Y2T7 364 aaKnown RBP23.97■■□□□ 1.43
PKP3-211ENST00000534401 PPME1Q9Y570 386 aa23.97■■□□□ 1.43
PKP3-211ENST00000534401 GHRP10912 638 aa23.96■■□□□ 1.43
PKP3-211ENST00000534401 TXKP42681 527 aa23.96■■□□□ 1.43
PKP3-211ENST00000534401 DEFB103AP81534 67 aa23.96■■□□□ 1.43
PKP3-211ENST00000534401 ZNF174Q15697 407 aa23.96■■□□□ 1.43
PKP3-211ENST00000534401 ZNF697Q5TEC3 545 aa23.96■■□□□ 1.43
PKP3-211ENST00000534401 TIFAQ96CG3 184 aa23.96■■□□□ 1.43
PKP3-211ENST00000534401 IFIH1Q9BYX4 1025 aaKnown RBP23.96■■□□□ 1.43
PKP3-211ENST00000534401 RGL1Q9NZL6 768 aa23.96■■□□□ 1.43
PKP3-211ENST00000534401 NOL7Q9UMY1 257 aaKnown RBP23.96■■□□□ 1.43
PKP3-211ENST00000534401 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.95■■□□□ 1.42
PKP3-211ENST00000534401 GPR32O75388 356 aa23.95■■□□□ 1.42
PKP3-211ENST00000534401 ATP2B1P20020 1258 aa23.95■■□□□ 1.42
PKP3-211ENST00000534401 KCNJ6P48051 423 aa23.95■■□□□ 1.42
PKP3-211ENST00000534401 NCAPH2Q6IBW4 605 aa23.95■■□□□ 1.42
PKP3-211ENST00000534401 EFCAB12Q6NXP0 572 aa23.95■■□□□ 1.42
PKP3-211ENST00000534401 TRMT1LQ7Z2T5 733 aaKnown RBP23.95■■□□□ 1.42
PKP3-211ENST00000534401 NEK9Q8TD19 979 aa23.95■■□□□ 1.42
PKP3-211ENST00000534401 DYDC2Q96IM9 177 aa23.95■■□□□ 1.42
PKP3-211ENST00000534401 EIF2AK1Q9BQI3 630 aaKnown RBP23.95■■□□□ 1.42
PKP3-211ENST00000534401 LXNQ9BS40 222 aa23.95■■□□□ 1.42
PKP3-211ENST00000534401 ZSWIM4Q9H7M6 989 aa23.95■■□□□ 1.42
PKP3-211ENST00000534401 CDHR5Q9HBB8 845 aa23.95■■□□□ 1.42
PKP3-211ENST00000534401 MSRAQ9UJ68 235 aa23.95■■□□□ 1.42
PKP3-211ENST00000534401 CHD7Q9P2D1 2997 aa23.94■■□□□ 1.42
PKP3-211ENST00000534401 TMEM150BA6NC51 233 aa23.94■■□□□ 1.42
PKP3-211ENST00000534401 DDX11L8A8MPP1 907 aa23.94■■□□□ 1.42
PKP3-211ENST00000534401 MAFO75444 373 aaPredicted RBP23.94■■□□□ 1.42
PKP3-211ENST00000534401 OR52Z1P0C646 297 aa23.94■■□□□ 1.42
PKP3-211ENST00000534401 RABGGTBP53611 331 aa23.94■■□□□ 1.42
PKP3-211ENST00000534401 GNL2Q13823 731 aaKnown RBP23.94■■□□□ 1.42
PKP3-211ENST00000534401 LARP1BQ659C4 914 aaKnown RBP23.94■■□□□ 1.42
PKP3-211ENST00000534401 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.94■■□□□ 1.42
PKP3-211ENST00000534401 GUCD1Q96NT3 240 aa23.94■■□□□ 1.42
PKP3-211ENST00000534401 ADAMTS10Q9H324 1103 aa23.94■■□□□ 1.42
PKP3-211ENST00000534401 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.94■■□□□ 1.42
PKP3-211ENST00000534401 K7ELQ4 463 aaPredicted RBP23.93■■□□□ 1.42
PKP3-211ENST00000534401 M0QZ92 97 aa23.93■■□□□ 1.42
PKP3-211ENST00000534401 GJB5O95377 273 aa23.93■■□□□ 1.42
PKP3-211ENST00000534401 TMOD1P28289 359 aa23.93■■□□□ 1.42
PKP3-211ENST00000534401 CLCN3P51790 818 aa23.93■■□□□ 1.42
PKP3-211ENST00000534401 CRYBB1P53674 252 aaPredicted RBP23.93■■□□□ 1.42
PKP3-211ENST00000534401 TBC1D8BQ0IIM8 1120 aa23.93■■□□□ 1.42
PKP3-211ENST00000534401 TMEM62Q0P6H9 643 aa23.93■■□□□ 1.42
PKP3-211ENST00000534401 ZNF576Q9H609 170 aa23.93■■□□□ 1.42
PKP3-211ENST00000534401 CYP26B1Q9NR63 512 aa23.93■■□□□ 1.42
PKP3-211ENST00000534401 SEPT9Q9UHD8 586 aaPredicted RBP23.93■■□□□ 1.42
PKP3-211ENST00000534401 PCDHB6Q9Y5E3 794 aa23.93■■□□□ 1.42
PKP3-211ENST00000534401 ARID2Q68CP9 1835 aa23.93■■□□□ 1.42
PKP3-211ENST00000534401 SPATA31C1P0DKV0 1188 aa23.92■■□□□ 1.42
PKP3-211ENST00000534401 FXR2P51116 673 aaKnown RBP eCLIP23.92■■□□□ 1.422e-6■□□□□ 9.8
PKP3-211ENST00000534401 NBR1Q14596 966 aa23.92■■□□□ 1.42
PKP3-211ENST00000534401 MTERF2Q49AM1 385 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms