RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 CCZ1P86791 482 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-216ENST00000534389 BIRC2Q13490 618 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 PPP2R5AQ15172 486 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 NR0B2Q15466 257 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 TPD52L1Q16890 204 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-216ENST00000534389 TKFCQ3LXA3 575 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 PLEKHG4Q58EX7 1191 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 MROH9Q5TGP6 573 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 PIK3R6Q5UE93 754 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 WWC2Q6AWC2 1192 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 DENND5AQ6IQ26 1287 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 CWC27Q6UX04 472 aaKnown RBP3.67□□□□□ -1.82
CSDE1-216ENST00000534389 LRRC31Q6UY01 552 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 ATG4DQ86TL0 474 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-216ENST00000534389 LUZP1Q86V48 1076 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 ITPRIPQ8IWB1 547 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 C16orf71Q8IYS4 520 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-216ENST00000534389 TCP11L2Q8N4U5 519 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 JMYQ8N9B5 988 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 KREMEN2Q8NCW0 462 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 TMEM52Q8NDY8 209 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 FLAD1Q8NFF5 587 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 ZCRB1Q8TBF4 217 aaKnown RBP3.67□□□□□ -1.82
CSDE1-216ENST00000534389 FAM168AQ92567 244 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 NINJ1Q92982 152 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 FBXW5Q969U6 566 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 SYAP1Q96A49 352 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-216ENST00000534389 EXOC4Q96A65 974 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 PEX11GQ96HA9 241 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 WNK4Q96J92 1243 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 CEP89Q96ST8 783 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 G6PC3Q9BUM1 346 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 JAM3Q9BX67 310 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 EPC1Q9H2F5 836 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 SPC25Q9HBM1 224 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 CRTAC1Q9NQ79 661 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 KCND1Q9NSA2 647 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 PSD3Q9NYI0 1048 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 EBF1Q9UH73 591 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 NOB1Q9ULX3 412 aaKnown RBP3.67□□□□□ -1.82
CSDE1-216ENST00000534389 KNSTRNQ9Y448 316 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 PRKAB1Q9Y478 270 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 TNPO3Q9Y5L0 923 aaKnown RBP3.67□□□□□ -1.82
CSDE1-216ENST00000534389 SYNMO15061 1565 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 EIF4G3O43432 1585 aaKnown RBP3.67□□□□□ -1.82
CSDE1-216ENST00000534389 A2MP01023 1474 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 PLA2R1Q13018 1463 aa3.67□□□□□ -1.82
CSDE1-216ENST00000534389 LAMC1P11047 1609 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 RTL1A6NKG5 1358 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 MSH6P52701 1360 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 CDK13Q14004 1512 aaKnown RBP3.66□□□□□ -1.82
CSDE1-216ENST00000534389 SHPRHQ149N8 1683 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 CCDC196A0A1B0GTZ2 297 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 GOLGA6L6A8MZA4 724 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 ABLIM1O14639 778 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 MSCO60682 206 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 KPNA6O60684 536 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 GAS7O60861 476 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 HIP1RO75146 1068 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 TADA3O75528 432 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 GLI1P08151 1106 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 JMJD7P0C870 316 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 ZNF853P0CG23 659 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 CPEP16870 476 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 HNRNPH1P31943 449 aaKnown RBP3.66□□□□□ -1.82
CSDE1-216ENST00000534389 SOX5P35711 763 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 MAP2K2P36507 400 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 LMAN1P49257 510 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 GNAI1P63096 354 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 TPM4P67936 248 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 MVKQ03426 396 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 EXOSC9Q06265 439 aaKnown RBP3.66□□□□□ -1.82
CSDE1-216ENST00000534389 SMC1AQ14683 1233 aaKnown RBP3.66□□□□□ -1.82
CSDE1-216ENST00000534389 KIR3DS1Q14943 382 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 NR1I3Q14994 352 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 NTRK3Q16288 839 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 ARHGAP29Q52LW3 1261 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 TIGD5Q53EQ6 642 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 TTC22Q5TAA0 569 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 LRCH2Q5VUJ6 765 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 MBLAC2Q68D91 279 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 TTC19Q6DKK2 380 aaPredicted RBP3.66□□□□□ -1.82
CSDE1-216ENST00000534389 CPLX2Q6PUV4 134 aaKnown RBP3.66□□□□□ -1.82
CSDE1-216ENST00000534389 PAQR3Q6TCH7 311 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 ATF7IPQ6VMQ6 1270 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 MILR1Q7Z6M3 343 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 ZNF605Q86T29 641 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 CCAR2Q8N163 923 aaKnown RBP3.66□□□□□ -1.82
CSDE1-216ENST00000534389 PPM1KQ8N3J5 372 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 CISD2Q8N5K1 135 aaKnown RBP3.66□□□□□ -1.82
CSDE1-216ENST00000534389 C2orf69Q8N8R5 385 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 TDRD7Q8NHU6 1098 aaKnown RBP3.66□□□□□ -1.82
CSDE1-216ENST00000534389 SLC7A14Q8TBB6 771 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 CHAC2Q8WUX2 184 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 LEO1Q8WVC0 666 aaPredicted RBP3.66□□□□□ -1.82
CSDE1-216ENST00000534389 TSR2Q969E8 191 aaKnown RBP3.66□□□□□ -1.82
CSDE1-216ENST00000534389 RUNDC1Q96C34 613 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 ASIC4Q96FT7 647 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 C1orf159Q96HA4 380 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 PRAM1Q96QH2 718 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms