RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 PAK2Q13177 524 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 STK3Q13188 491 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 CRIPAKQ8N1N5 446 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 RDM1Q8NG50 284 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 SLC5A5Q92911 643 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 ZNF689Q96CS4 500 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-228ENST00000534373 MRPL38Q96DV4 380 aaKnown RBP15.15■□□□□ 0.02
CAPN1-228ENST00000534373 SLKQ9H2G2 1235 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-228ENST00000534373 DISC1Q9NRI5 854 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 NRBP2Q9NSY0 501 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 GABBR1Q9UBS5 961 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 SAMM50Q9Y512 469 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 SIP14410 1827 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 TTC28Q96AY4 2481 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 TTC3P53804 2025 aa15.14■□□□□ 0.01
CAPN1-228ENST00000534373 C5orf67F2Z3F1 127 aa15.14■□□□□ 0.01
CAPN1-228ENST00000534373 GAS7O60861 476 aa15.14■□□□□ 0.01
CAPN1-228ENST00000534373 DGKIO75912 1065 aa15.14■□□□□ 0.01
CAPN1-228ENST00000534373 CENPBP07199 599 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-228ENST00000534373 STAG3L1P0CL83 205 aa15.14■□□□□ 0.01
CAPN1-228ENST00000534373 JAK3P52333 1124 aa15.14■□□□□ 0.01
CAPN1-228ENST00000534373 TMEM62Q0P6H9 643 aa15.14■□□□□ 0.01
CAPN1-228ENST00000534373 RTN4RL1Q86UN2 441 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-228ENST00000534373 NPAS4Q8IUM7 802 aa15.14■□□□□ 0.01
CAPN1-228ENST00000534373 ADAMTS19Q8TE59 1207 aa15.14■□□□□ 0.01
CAPN1-228ENST00000534373 CLP1Q92989 425 aaKnown RBP15.14■□□□□ 0.01
CAPN1-228ENST00000534373 LARP6Q9BRS8 491 aaKnown RBP15.14■□□□□ 0.01
CAPN1-228ENST00000534373 TEKT3Q9BXF9 490 aa15.14■□□□□ 0.01
CAPN1-228ENST00000534373 RC3H2Q9HBD1 1191 aaKnown RBP15.14■□□□□ 0.01
CAPN1-228ENST00000534373 REV3LO60673 3130 aa15.14■□□□□ 0.01
CAPN1-228ENST00000534373 STK36Q9NRP7 1315 aa15.14■□□□□ 0.01
CAPN1-228ENST00000534373 GPR182O15218 404 aa15.13■□□□□ 0.01
CAPN1-228ENST00000534373 PFKFB2O60825 505 aa15.13■□□□□ 0.01
CAPN1-228ENST00000534373 PSMD10O75832 226 aa15.13■□□□□ 0.01
CAPN1-228ENST00000534373 C22orf31O95567 290 aa15.13■□□□□ 0.01
CAPN1-228ENST00000534373 TMOD1P28289 359 aa15.13■□□□□ 0.01
CAPN1-228ENST00000534373 BMPR1AP36894 532 aa15.13■□□□□ 0.01
CAPN1-228ENST00000534373 CRYBB1P53674 252 aaPredicted RBP15.13■□□□□ 0.01
CAPN1-228ENST00000534373 TFF2Q03403 129 aa15.13■□□□□ 0.01
CAPN1-228ENST00000534373 SCRN1Q12765 414 aa15.13■□□□□ 0.01
CAPN1-228ENST00000534373 GPM6BQ13491 265 aa15.13■□□□□ 0.01
CAPN1-228ENST00000534373 NONOQ15233 471 aaKnown RBP eCLIP15.13■□□□□ 0.01
CAPN1-228ENST00000534373 NPY5RQ15761 445 aa15.13■□□□□ 0.01
CAPN1-228ENST00000534373 LRCH2Q5VUJ6 765 aa15.13■□□□□ 0.01
CAPN1-228ENST00000534373 KRT25Q7Z3Z0 450 aa15.13■□□□□ 0.01
CAPN1-228ENST00000534373 MBOAT7Q96N66 472 aa15.13■□□□□ 0.01
CAPN1-228ENST00000534373 UIMC1Q96RL1 719 aa15.13■□□□□ 0.01
CAPN1-228ENST00000534373 UHRF1Q96T88 793 aaPredicted RBP15.13■□□□□ 0.01
CAPN1-228ENST00000534373 PLVAPQ9BX97 442 aa15.13■□□□□ 0.01
CAPN1-228ENST00000534373 ADGRA3Q8IWK6 1321 aa15.13■□□□□ 0.01
CAPN1-228ENST00000534373 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.12■□□□□ 0.01
CAPN1-228ENST00000534373 RBAK-RBAKDNI3L0D1 243 aa15.12■□□□□ 0.01
CAPN1-228ENST00000534373 RPS6KA5O75582 802 aa15.12■□□□□ 0.01
CAPN1-228ENST00000534373 BTG3Q14201 252 aaPredicted RBP15.12■□□□□ 0.01
CAPN1-228ENST00000534373 TIGD5Q53EQ6 642 aa15.12■□□□□ 0.01
CAPN1-228ENST00000534373 CMTR2Q8IYT2 770 aaKnown RBP15.12■□□□□ 0.01
CAPN1-228ENST00000534373 LINC01599Q8WXQ3 324 aa15.12■□□□□ 0.01
CAPN1-228ENST00000534373 WASF1Q92558 559 aa15.12■□□□□ 0.01
CAPN1-228ENST00000534373 C11orf84Q9BUA3 381 aaPredicted RBP15.12■□□□□ 0.01
CAPN1-228ENST00000534373 PHF20Q9BVI0 1012 aa15.12■□□□□ 0.01
CAPN1-228ENST00000534373 LMAN2LQ9H0V9 348 aa15.12■□□□□ 0.01
CAPN1-228ENST00000534373 TPCN1Q9ULQ1 816 aa15.12■□□□□ 0.01
CAPN1-228ENST00000534373 MYH9P35579 1960 aaKnown RBP15.12■□□□□ 0.01
CAPN1-228ENST00000534373 GPR32O75388 356 aa15.11■□□□□ 0.01
CAPN1-228ENST00000534373 OATP04181 439 aa15.11■□□□□ 0.01
CAPN1-228ENST00000534373 LINC00271P0C7V0 271 aa15.11■□□□□ 0.01
CAPN1-228ENST00000534373 CDC42EP1Q00587 391 aa15.11■□□□□ 0.01
CAPN1-228ENST00000534373 NFX1Q12986 1120 aaKnown RBP15.11■□□□□ 0.01
CAPN1-228ENST00000534373 NAALADL2Q58DX5 795 aa15.11■□□□□ 0.01
CAPN1-228ENST00000534373 PPP4R3AQ6IN85 833 aa15.11■□□□□ 0.01
CAPN1-228ENST00000534373 B3GNT9Q6UX72 402 aa15.11■□□□□ 0.01
CAPN1-228ENST00000534373 METTL13Q8N6R0 699 aa15.11■□□□□ 0.01
CAPN1-228ENST00000534373 NAP1L4Q99733 375 aaKnown RBP15.11■□□□□ 0.01
CAPN1-228ENST00000534373 TMX1Q9H3N1 280 aa15.11■□□□□ 0.01
CAPN1-228ENST00000534373 UNC45AQ9H3U1 944 aa15.11■□□□□ 0.01
CAPN1-228ENST00000534373 CDHR5Q9HBB8 845 aa15.11■□□□□ 0.01
CAPN1-228ENST00000534373 ERVK-5Q9HDB9 667 aa15.11■□□□□ 0.01
CAPN1-228ENST00000534373 C1orf112Q9NSG2 853 aa15.11■□□□□ 0.01
CAPN1-228ENST00000534373 GINS2Q9Y248 185 aa15.11■□□□□ 0.01
CAPN1-228ENST00000534373 NOC2LQ9Y3T9 749 aaKnown RBP15.11■□□□□ 0.01
CAPN1-228ENST00000534373 COL4A4P53420 1690 aaPredicted RBP15.11■□□□□ 0.01
CAPN1-228ENST00000534373 NCK2O43639 380 aa15.1■□□□□ 0.01
CAPN1-228ENST00000534373 ZNF862O60290 1169 aa15.1■□□□□ 0.01
CAPN1-228ENST00000534373 GCFC2P16383 781 aaKnown RBP15.1■□□□□ 0.01
CAPN1-228ENST00000534373 CTNNB1P35222 781 aa15.1■□□□□ 0.01
CAPN1-228ENST00000534373 SARSP49591 514 aaKnown RBP15.1■□□□□ 0.01
CAPN1-228ENST00000534373 EFCAB12Q6NXP0 572 aa15.1■□□□□ 0.01
CAPN1-228ENST00000534373 SLC24A5Q71RS6 500 aa15.1■□□□□ 0.01
CAPN1-228ENST00000534373 MIER3Q7Z3K6 550 aa15.1■□□□□ 0.01
CAPN1-228ENST00000534373 LINC01465Q8N7H1 131 aa15.1■□□□□ 0.01
CAPN1-228ENST00000534373 BANK1Q8NDB2 785 aa15.1■□□□□ 0.01
CAPN1-228ENST00000534373 ETNPPLQ8TBG4 499 aa15.1■□□□□ 0.01
CAPN1-228ENST00000534373 P2RX5Q93086 422 aa15.1■□□□□ 0.01
CAPN1-228ENST00000534373 FAM20AQ96MK3 541 aa15.1■□□□□ 0.01
CAPN1-228ENST00000534373 AIFM3Q96NN9 605 aa15.1■□□□□ 0.01
CAPN1-228ENST00000534373 MAP7D2Q96T17 732 aa15.1■□□□□ 0.01
CAPN1-228ENST00000534373 NIFKQ9BYG3 293 aaKnown RBP15.1■□□□□ 0.01
CAPN1-228ENST00000534373 RGS18Q9NS28 235 aa15.1■□□□□ 0.01
CAPN1-228ENST00000534373 DDX25Q9UHL0 483 aaKnown RBP15.1■□□□□ 0.01
CAPN1-228ENST00000534373 LRFN2Q9ULH4 789 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms