RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 CUTAO60888 179 aa5.74□□□□□ -1.49
ATPAF1-211ENST00000534216 CYP17A1P05093 508 aa5.74□□□□□ -1.49
ATPAF1-211ENST00000534216 ATP2A2P16615 1042 aaKnown RBP5.74□□□□□ -1.49
ATPAF1-211ENST00000534216 HSD3B2P26439 372 aa5.74□□□□□ -1.49
ATPAF1-211ENST00000534216 CSF2RBP32927 897 aa5.74□□□□□ -1.49
ATPAF1-211ENST00000534216 GYS2P54840 703 aa5.74□□□□□ -1.49
ATPAF1-211ENST00000534216 DSG1Q02413 1049 aa5.74□□□□□ -1.49
ATPAF1-211ENST00000534216 SKOR2Q2VWA4 1001 aaPredicted RBP5.74□□□□□ -1.49
ATPAF1-211ENST00000534216 TBC1D10BQ4KMP7 808 aaPredicted RBP5.74□□□□□ -1.49
ATPAF1-211ENST00000534216 PLEKHH3Q7Z736 793 aa5.74□□□□□ -1.49
ATPAF1-211ENST00000534216 RALYLQ86SE5 291 aaKnown RBP5.74□□□□□ -1.49
ATPAF1-211ENST00000534216 NXPE1Q8N323 547 aa5.74□□□□□ -1.49
ATPAF1-211ENST00000534216 WDR48Q8TAF3 677 aa5.74□□□□□ -1.49
ATPAF1-211ENST00000534216 BDH2Q9BUT1 245 aa5.74□□□□□ -1.49
ATPAF1-211ENST00000534216 OXSMQ9NWU1 459 aa5.74□□□□□ -1.49
ATPAF1-211ENST00000534216 FBXO10Q9UK96 956 aa5.74□□□□□ -1.49
ATPAF1-211ENST00000534216 A0A087X0B3 334 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 GSG1L2A8MUP6 293 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 LAMTOR5O43504 91 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 B4GALT4O60513 344 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 GAS7O60861 476 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 PLATP00750 562 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 SLC9A1P19634 815 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 PTX3P26022 381 aaPredicted RBP5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 ADCY8P40145 1251 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 ETV4P43268 484 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 CD83Q01151 205 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 ALDH6A1Q02252 535 aaKnown RBP5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 SURF1Q15526 300 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 SEPT7Q16181 437 aaKnown RBP5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 ERICH6BQ5W0A0 696 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 GPR155Q7Z3F1 870 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 AHI1Q8N157 1196 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 CALML6Q8TD86 181 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 E2F7Q96AV8 911 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 C16orf92Q96LL3 132 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 ELF4Q99607 663 aaPredicted RBP5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 FOXB1Q99853 325 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 CARD11Q9BXL7 1154 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 ZDHHC5Q9C0B5 715 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 IFT57Q9NWB7 429 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 H2AFY2Q9P0M6 372 aaPredicted RBP5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 SPO11Q9Y5K1 396 aa5.73□□□□□ -1.49
ATPAF1-211ENST00000534216 CELA3BP08861 270 aa5.72□□□□□ -1.49
ATPAF1-211ENST00000534216 ZNF888P0CJ79 500 aaPredicted RBP5.72□□□□□ -1.49
ATPAF1-211ENST00000534216 MYCLP1P12525 358 aaPredicted RBP5.72□□□□□ -1.49
ATPAF1-211ENST00000534216 APEX1P27695 318 aaKnown RBP5.72□□□□□ -1.49
ATPAF1-211ENST00000534216 USP10Q14694 798 aaKnown RBP5.72□□□□□ -1.49
ATPAF1-211ENST00000534216 EPHA7Q15375 998 aa5.72□□□□□ -1.49
ATPAF1-211ENST00000534216 TAF7LQ5H9L4 462 aa5.72□□□□□ -1.49
ATPAF1-211ENST00000534216 RBM15Q96T37 977 aaKnown RBP eCLIP5.72□□□□□ -1.49
ATPAF1-211ENST00000534216 PTPN22Q9Y2R2 807 aa5.72□□□□□ -1.49
ATPAF1-211ENST00000534216 PDE8AO60658 829 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 MAFO75444 373 aaPredicted RBP5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 PRLP01236 227 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 HMGCRP04035 888 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 ITGB3P05106 788 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 KCNQ1P51787 676 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 EPHB4P54760 987 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 PPP2CBP62714 309 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 PPP2CAP67775 309 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 SLC6A3Q01959 620 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 ROM1Q03395 351 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 PLP2Q04941 152 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 MOGSQ13724 837 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 EIF4HQ15056 248 aaKnown RBP5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 TMEM200BQ69YZ2 307 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 GRAMD4Q6IC98 578 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 ESRP1Q6NXG1 681 aaKnown RBP5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 ARHGEF18Q6ZSZ5 1173 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 OTOP2Q7RTS6 562 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 NME9Q86XW9 330 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 IFNL2Q8IZJ0 200 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 EFHBQ8N7U6 833 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 SMC1BQ8NDV3 1235 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 CHTF18Q8WVB6 975 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 MAML3Q96JK9 1138 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 TOMM22Q9NS69 142 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 THG1LQ9NWX6 298 aaKnown RBP5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 CDC42EP3Q9UKI2 254 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 MAPRE3Q9UPY8 281 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 SLC4A7Q9Y6M7 1214 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 ZNF536O15090 1300 aa5.71□□□□□ -1.5
ATPAF1-211ENST00000534216 A0A0G2JNJ9 132 aa5.7□□□□□ -1.5
ATPAF1-211ENST00000534216 UBA6A0AVT1 1052 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-211ENST00000534216 B8ZZF3 427 aa5.7□□□□□ -1.5
ATPAF1-211ENST00000534216 CNOT4O95628 575 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-211ENST00000534216 RGS3P49796 1198 aa5.7□□□□□ -1.5
ATPAF1-211ENST00000534216 SCNN1BP51168 640 aa5.7□□□□□ -1.5
ATPAF1-211ENST00000534216 TTC38Q5R3I4 469 aa5.7□□□□□ -1.5
ATPAF1-211ENST00000534216 LARP4Q71RC2 724 aaKnown RBP eCLIP5.7□□□□□ -1.5
ATPAF1-211ENST00000534216 SSBP3Q9BWW4 388 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-211ENST00000534216 SLKQ9H2G2 1235 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-211ENST00000534216 ZMAT4Q9H898 229 aa5.7□□□□□ -1.5
ATPAF1-211ENST00000534216 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.7□□□□□ -1.5
ATPAF1-211ENST00000534216 PPP4R1LQ9P1A2 415 aa5.7□□□□□ -1.5
ATPAF1-211ENST00000534216 Q9UFV3 132 aa5.7□□□□□ -1.5
ATPAF1-211ENST00000534216 CNOT11Q9UKZ1 510 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-211ENST00000534216 PRRG2O14669 202 aa5.69□□□□□ -1.5
ATPAF1-211ENST00000534216 KPNA1P52294 538 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms