RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 IER5Q5VY09 327 aa14.17□□□□□ -0.14
SVIP-205ENST00000533774 PCNX4Q63HM2 1172 aa14.17□□□□□ -0.14
SVIP-205ENST00000533774 PDE12Q6L8Q7 609 aaKnown RBP14.17□□□□□ -0.14
SVIP-205ENST00000533774 USP17L6PQ6QN14 398 aa14.17□□□□□ -0.14
SVIP-205ENST00000533774 LRRC55Q6ZSA7 311 aa14.17□□□□□ -0.14
SVIP-205ENST00000533774 SEPT1Q8WYJ6 367 aa14.17□□□□□ -0.14
SVIP-205ENST00000533774 MRPS27Q92552 414 aaKnown RBP14.17□□□□□ -0.14
SVIP-205ENST00000533774 TCF25Q9BQ70 676 aa14.17□□□□□ -0.14
SVIP-205ENST00000533774 SENP2Q9HC62 589 aa14.17□□□□□ -0.14
SVIP-205ENST00000533774 ERVK-5Q9HDB9 667 aa14.17□□□□□ -0.14
SVIP-205ENST00000533774 PCDHB7Q9Y5E2 793 aa14.17□□□□□ -0.14
SVIP-205ENST00000533774 MYH9P35579 1960 aaKnown RBP14.16□□□□□ -0.14
SVIP-205ENST00000533774 ACACBO00763 2458 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 FSD2A1L4K1 749 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 C9IYK1 514 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 FGFR1P11362 822 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 PLCB3Q01970 1234 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 ANGPT1Q15389 498 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 IFIT1BQ5T764 474 aaKnown RBP14.16□□□□□ -0.14
SVIP-205ENST00000533774 CYB5R4Q7L1T6 521 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 C12orf76Q8N812 135 aaPredicted RBP14.16□□□□□ -0.14
SVIP-205ENST00000533774 FLCNQ8NFG4 579 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 TMEM40Q8WWA1 233 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 GLG1Q92896 1179 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 ADAM2Q99965 735 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 ADAM7Q9H2U9 754 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 MFSD1Q9H3U5 465 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 ENTPD7Q9NQZ7 604 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 AAASQ9NRG9 546 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 RNF19AQ9NV58 838 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 PKD2L1Q9P0L9 805 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 LZTS1Q9Y250 596 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 NOC2LQ9Y3T9 749 aaKnown RBP14.16□□□□□ -0.14
SVIP-205ENST00000533774 HCFC2Q9Y5Z7 792 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 DOCK8Q8NF50 2099 aa14.16□□□□□ -0.14
SVIP-205ENST00000533774 KDM3AQ9Y4C1 1321 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 MAP1BP46821 2468 aaKnown RBP14.15□□□□□ -0.14
SVIP-205ENST00000533774 PNMA6FA0A0J9YX94 578 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 RRN3P2A6NIE6 340 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 MEIS2O14770 477 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 SRGAP2BP0DMP2 458 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 ITGB5P18084 799 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 AOC1P19801 751 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 NFX1Q12986 1120 aaKnown RBP14.15□□□□□ -0.14
SVIP-205ENST00000533774 GRM4Q14833 912 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 DGLUCYQ7Z3D6 616 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 CCDC105Q8IYK2 499 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 KIAA2013Q8IYS2 634 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 PIBF1Q8WXW3 757 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 CNTNAP3BQ96NU0 1288 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 CNTNAP3Q9BZ76 1288 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 SMARCAD1Q9H4L7 1026 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 RGS18Q9NS28 235 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 PCDHA2Q9Y5H9 948 aa14.15□□□□□ -0.14
SVIP-205ENST00000533774 CACNA1GO43497 2377 aa14.14□□□□□ -0.15
SVIP-205ENST00000533774 CLASP2O75122 1294 aaKnown RBP14.14□□□□□ -0.15
SVIP-205ENST00000533774 PDE4AP27815 886 aa14.14□□□□□ -0.15
SVIP-205ENST00000533774 PLCB4Q15147 1175 aa14.14□□□□□ -0.15
SVIP-205ENST00000533774 RARS2Q5T160 578 aaKnown RBP14.14□□□□□ -0.15
SVIP-205ENST00000533774 ANKRD45Q5TZF3 282 aa14.14□□□□□ -0.15
SVIP-205ENST00000533774 ZDHHC14Q8IZN3 488 aa14.14□□□□□ -0.15
SVIP-205ENST00000533774 DTWD2Q8NBA8 298 aa14.14□□□□□ -0.15
SVIP-205ENST00000533774 CASP10Q92851 521 aa14.14□□□□□ -0.15
SVIP-205ENST00000533774 UBAC1Q9BSL1 405 aa14.14□□□□□ -0.15
SVIP-205ENST00000533774 GPR179Q6PRD1 2367 aa14.14□□□□□ -0.15
SVIP-205ENST00000533774 C2orf71A6NGG8 1288 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 M0QZ92 97 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 LAG3P18627 525 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 SDSP20132 328 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 NT5C2P49902 561 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 FAM189BP81408 668 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 KRT76Q01546 638 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 ITIH3Q06033 890 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 TPRNQ4KMQ1 711 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 KCNT2Q6UVM3 1135 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 SLC24A5Q71RS6 500 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 NLRX1Q86UT6 975 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 GIMAP8Q8ND71 665 aaPredicted RBP14.13□□□□□ -0.15
SVIP-205ENST00000533774 GPRASP2Q96D09 838 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 NECTIN4Q96NY8 510 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 CASD1Q96PB1 797 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 NGRNQ9NPE2 291 aaKnown RBP14.13□□□□□ -0.15
SVIP-205ENST00000533774 ST3GAL5Q9UNP4 418 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 R4GN57 208 aa14.13□□□□□ -0.15
SVIP-205ENST00000533774 DOCK6Q96HP0 2047 aa14.12□□□□□ -0.15
SVIP-205ENST00000533774 SMIM35A0A1B0GVV1 85 aa14.12□□□□□ -0.15
SVIP-205ENST00000533774 MTHFRP42898 656 aa14.12□□□□□ -0.15
SVIP-205ENST00000533774 DSC3Q14574 896 aa14.12□□□□□ -0.15
SVIP-205ENST00000533774 CES5AQ6NT32 575 aa14.12□□□□□ -0.15
SVIP-205ENST00000533774 XRRA1Q6P2D8 792 aa14.12□□□□□ -0.15
SVIP-205ENST00000533774 MTHFD1LQ6UB35 978 aa14.12□□□□□ -0.15
SVIP-205ENST00000533774 TMC7Q7Z402 723 aa14.12□□□□□ -0.15
SVIP-205ENST00000533774 TICAM2Q86XR7 235 aa14.12□□□□□ -0.15
SVIP-205ENST00000533774 MRPL43Q8N983 215 aaKnown RBP14.12□□□□□ -0.15
SVIP-205ENST00000533774 TDRD5Q8NAT2 981 aaKnown RBP14.12□□□□□ -0.15
SVIP-205ENST00000533774 RILPL2Q969X0 211 aa14.12□□□□□ -0.15
SVIP-205ENST00000533774 KRT23Q9C075 422 aa14.12□□□□□ -0.15
SVIP-205ENST00000533774 GINS2Q9Y248 185 aa14.12□□□□□ -0.15
SVIP-205ENST00000533774 UBIAD1Q9Y5Z9 338 aa14.12□□□□□ -0.15
SVIP-205ENST00000533774 DENND3A2RUS2 1198 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms