RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 POLR3CQ9BUI4 534 aaPredicted RBP12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 PRR14Q9BWN1 585 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 MCOLN1Q9GZU1 580 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 TUFT1Q9NNX1 390 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 PDGFCQ9NRA1 345 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 GMPR2Q9P2T1 348 aaKnown RBP12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 PCDHB3Q9Y5E6 796 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 FSD2A1L4K1 749 aa12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 PP2D1A8MPX8 630 aa12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 PSMD10O75832 226 aa12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 CDC25AP30304 524 aa12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 ADCYAP1R1P41586 468 aa12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 TPM4P67936 248 aa12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 TNFAIP2Q03169 654 aa12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 CT47A1Q5JQC4 288 aaPredicted RBP12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 NT5DC1Q5TFE4 455 aa12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 PDXDC2PQ6P474 469 aa12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 SMAP1Q8IYB5 467 aaPredicted RBP12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 ARMC5Q96C12 935 aa12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 SENP7Q9BQF6 1050 aa12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 GRPEL1Q9HAV7 217 aa12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 AGO4Q9HCK5 861 aaKnown RBP12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 TUBE1Q9UJT0 475 aa12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 DDX41Q9UJV9 622 aaKnown RBP12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 VAV3Q9UKW4 847 aa12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 DNM3Q9UQ16 869 aa12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 KIAA1217Q5T5P2 1943 aa12.2□□□□□ -0.46
CCDC90B-218ENST00000533761 WDR64B1ANS9 1081 aa12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 NKRFO15226 690 aaKnown RBP eCLIP12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 CCND3P30281 292 aaPredicted RBP12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 PPP1R2P41236 205 aa12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 AFMP43652 599 aa12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 SPIRE1Q08AE8 756 aa12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 PNOCQ13519 176 aa12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 NEDD9Q14511 834 aa12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 DUSP28Q4G0W2 176 aa12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 SWT1Q5T5J6 900 aaKnown RBP12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 CCDC62Q6P9F0 684 aa12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 SH3RF1Q7Z6J0 888 aa12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 TRPV1Q8NER1 839 aa12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 ZNF333Q96JL9 665 aa12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 FUCA2Q9BTY2 467 aa12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 KBTBD4Q9NVX7 518 aa12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 SAMM50Q9Y512 469 aa12.19□□□□□ -0.46
CCDC90B-218ENST00000533761 A0A087X0B3 334 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 BECN2A8MW95 431 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 GOLGA6L19H0YKK7 550 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 DUSP11O75319 330 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 ARP10275 920 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 RARBP10826 455 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 ZNF165P49910 485 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 NLRP12P59046 1061 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 MDM2Q00987 491 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 EPHA7Q15375 998 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 ANO6Q4KMQ2 910 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 TMEM119Q4V9L6 283 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 ZNF746Q6NUN9 644 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 MIER3Q7Z3K6 550 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 MLKLQ8NB16 471 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 RAD54LQ92698 747 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 MMTAG2Q9BU76 263 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 RNF208Q9H0X6 261 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 DDX20Q9UHI6 824 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 Q9Y3F1 56 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 PCDHA5Q9Y5H7 936 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 NFASCO94856 1347 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 LRRC37A2A6NM11 1700 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 CHMP2AO43633 222 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 CCL5P13501 91 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 SMPD1P17405 629 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 DPYDQ12882 1025 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 STIM1Q13586 685 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 LAMC2Q13753 1193 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 LY6KQ17RY6 165 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 UVSSAQ2YD98 709 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 DHX37Q8IY37 1157 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 SPATA20Q8TB22 786 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 CCDC43Q96MW1 224 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 NACC1Q96RE7 527 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 EIF2AK1Q9BQI3 630 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 UNC93B1Q9H1C4 597 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 MLXIPQ9HAP2 919 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 SPC25Q9HBM1 224 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 JPH1Q9HDC5 661 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 KCND2Q9NZV8 630 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 KIAA1024Q9UPX6 916 aa12.18□□□□□ -0.46
CCDC90B-218ENST00000533761 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 SMTNL1A8MU46 457 aa12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 ATP9AO75110 1047 aa12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 ARIH2O95376 493 aa12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 MYCP01106 439 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 GH1P01241 217 aa12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 P4HBP07237 508 aaKnown RBP12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 KCNA2P16389 499 aa12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 UBA1P22314 1058 aaKnown RBP12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 SP2Q02086 613 aa12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 GRB10Q13322 594 aa12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 KCNB1Q14721 858 aa12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 MTFR1Q15390 333 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms