RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 RRN3P2A6NIE6 340 aa19.48■□□□□ 0.71
NXF1-216ENST00000533499 DCDC2CA8MYV0 355 aa19.48■□□□□ 0.71
NXF1-216ENST00000533499 STBD1O95210 358 aa19.48■□□□□ 0.71
NXF1-216ENST00000533499 PTPN11Q06124 597 aaPredicted RBP19.48■□□□□ 0.71
NXF1-216ENST00000533499 TBC1D8BQ0IIM8 1120 aa19.48■□□□□ 0.71
NXF1-216ENST00000533499 ADALQ6DHV7 355 aa19.48■□□□□ 0.71
NXF1-216ENST00000533499 METTL13Q8N6R0 699 aa19.48■□□□□ 0.71
NXF1-216ENST00000533499 FSIP1Q8NA03 581 aa19.48■□□□□ 0.71
NXF1-216ENST00000533499 HTATIP2Q9BUP3 242 aa19.48■□□□□ 0.71
NXF1-216ENST00000533499 CCSER1Q9C0I3 900 aa19.48■□□□□ 0.71
NXF1-216ENST00000533499 SUGCTQ9HAC7 445 aa19.48■□□□□ 0.71
NXF1-216ENST00000533499 CYP26B1Q9NR63 512 aa19.48■□□□□ 0.71
NXF1-216ENST00000533499 TUBE1Q9UJT0 475 aa19.48■□□□□ 0.71
NXF1-216ENST00000533499 MROH7Q68CQ1 1323 aa19.48■□□□□ 0.71
NXF1-216ENST00000533499 A0A1B0GVL5 298 aa19.47■□□□□ 0.71
NXF1-216ENST00000533499 TREHO43280 583 aa19.47■□□□□ 0.71
NXF1-216ENST00000533499 PRPF40AO75400 957 aaKnown RBP19.47■□□□□ 0.71
NXF1-216ENST00000533499 LYPLA2O95372 231 aa19.47■□□□□ 0.71
NXF1-216ENST00000533499 KLRC1P26715 233 aa19.47■□□□□ 0.71
NXF1-216ENST00000533499 STAT6P42226 847 aa19.47■□□□□ 0.71
NXF1-216ENST00000533499 POLGP54098 1239 aaPredicted RBP19.47■□□□□ 0.71
NXF1-216ENST00000533499 RESP18Q5W5W9 173 aa19.47■□□□□ 0.71
NXF1-216ENST00000533499 UBE2Q1Q7Z7E8 422 aa19.47■□□□□ 0.71
NXF1-216ENST00000533499 DPF3Q92784 378 aa19.47■□□□□ 0.71
NXF1-216ENST00000533499 DHX58Q96C10 678 aa19.47■□□□□ 0.71
NXF1-216ENST00000533499 NIFKQ9BYG3 293 aaKnown RBP19.47■□□□□ 0.71
NXF1-216ENST00000533499 FAM49AQ9H0Q0 323 aaPredicted RBP19.47■□□□□ 0.71
NXF1-216ENST00000533499 BHMT2Q9H2M3 363 aa19.47■□□□□ 0.71
NXF1-216ENST00000533499 PRDM5Q9NQX1 630 aaPredicted RBP19.47■□□□□ 0.71
NXF1-216ENST00000533499 ANKEF1Q9NU02 776 aa19.47■□□□□ 0.71
NXF1-216ENST00000533499 COL1A2P08123 1366 aa19.46■□□□□ 0.71
NXF1-216ENST00000533499 B4GALT4O60513 344 aa19.46■□□□□ 0.71
NXF1-216ENST00000533499 USO1O60763 962 aaKnown RBP19.46■□□□□ 0.71
NXF1-216ENST00000533499 CYP2C9P11712 490 aa19.46■□□□□ 0.71
NXF1-216ENST00000533499 MUTP22033 750 aa19.46■□□□□ 0.71
NXF1-216ENST00000533499 CDK7P50613 346 aa19.46■□□□□ 0.71
NXF1-216ENST00000533499 HIC1Q14526 733 aa19.46■□□□□ 0.71
NXF1-216ENST00000533499 TMEM119Q4V9L6 283 aa19.46■□□□□ 0.71
NXF1-216ENST00000533499 CCDC73Q6ZRK6 1079 aa19.46■□□□□ 0.71
NXF1-216ENST00000533499 MAEAQ7L5Y9 396 aa19.46■□□□□ 0.71
NXF1-216ENST00000533499 KCNK18Q7Z418 384 aa19.46■□□□□ 0.71
NXF1-216ENST00000533499 SLC43A3Q8NBI5 491 aa19.46■□□□□ 0.71
NXF1-216ENST00000533499 MRPS27Q92552 414 aaKnown RBP19.46■□□□□ 0.71
NXF1-216ENST00000533499 SEZ6LQ9BYH1 1024 aa19.46■□□□□ 0.71
NXF1-216ENST00000533499 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.45■□□□□ 0.7
NXF1-216ENST00000533499 SLC26A4O43511 780 aa19.45■□□□□ 0.7
NXF1-216ENST00000533499 EYA4O95677 639 aa19.45■□□□□ 0.7
NXF1-216ENST00000533499 XRCC6P12956 609 aaKnown RBP eCLIP19.45■□□□□ 0.7
NXF1-216ENST00000533499 PFKFB1P16118 471 aa19.45■□□□□ 0.7
NXF1-216ENST00000533499 CMA1P23946 247 aa19.45■□□□□ 0.7
NXF1-216ENST00000533499 MTHFD1LQ6UB35 978 aa19.45■□□□□ 0.7
NXF1-216ENST00000533499 SESTD1Q86VW0 696 aa19.45■□□□□ 0.7
NXF1-216ENST00000533499 FAM126BQ8IXS8 530 aa19.45■□□□□ 0.7
NXF1-216ENST00000533499 C7orf61Q8IZ16 206 aa19.45■□□□□ 0.7
NXF1-216ENST00000533499 KCNH3Q9ULD8 1083 aa19.45■□□□□ 0.7
NXF1-216ENST00000533499 EVPLQ92817 2033 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 A0A087X0B3 334 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 A0A1W2PQ27 194 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 A0A1W2PQ64 194 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 A0A1W2PQD8 194 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 ZBTB42B2RXF5 422 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 GOLGA6L22H0YM25 854 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 POLR2DO15514 142 aaKnown RBP19.44■□□□□ 0.7
NXF1-216ENST00000533499 GADD45BO75293 160 aaPredicted RBP19.44■□□□□ 0.7
NXF1-216ENST00000533499 KRT18P05783 430 aaKnown RBP19.44■□□□□ 0.7
NXF1-216ENST00000533499 PLA2G4BP0C869 781 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 RARRES1P49788 294 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 MCM6Q14566 821 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 SNX17Q15036 470 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 HYIQ5T013 277 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 EFCAB12Q6NXP0 572 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 PADI6Q6TGC4 694 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 RUFY4Q6ZNE9 571 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 LRRC71Q8N4P6 559 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 RETREG2Q8NC44 543 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 SLC7A3Q8WY07 619 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 RAD54LQ92698 747 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 TMEM39AQ9NV64 488 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 DBR1Q9UK59 544 aaKnown RBP19.44■□□□□ 0.7
NXF1-216ENST00000533499 BRCA2P51587 3418 aa19.44■□□□□ 0.7
NXF1-216ENST00000533499 MAGEB2O15479 319 aa19.43■□□□□ 0.7
NXF1-216ENST00000533499 EVI5O60447 810 aa19.43■□□□□ 0.7
NXF1-216ENST00000533499 C22orf31O95567 290 aa19.43■□□□□ 0.7
NXF1-216ENST00000533499 CLCN3P51790 818 aa19.43■□□□□ 0.7
NXF1-216ENST00000533499 EMC2Q15006 297 aa19.43■□□□□ 0.7
NXF1-216ENST00000533499 TARBP2Q15633 366 aaKnown RBP19.43■□□□□ 0.7
NXF1-216ENST00000533499 MARCH8Q5T0T0 291 aa19.43■□□□□ 0.7
NXF1-216ENST00000533499 IQUBQ8NA54 791 aa19.43■□□□□ 0.7
NXF1-216ENST00000533499 LARP4BQ92615 738 aaKnown RBP19.43■□□□□ 0.7
NXF1-216ENST00000533499 PPP1R16BQ96T49 567 aa19.43■□□□□ 0.7
NXF1-216ENST00000533499 ATP6V0A4Q9HBG4 840 aa19.43■□□□□ 0.7
NXF1-216ENST00000533499 ARID2Q68CP9 1835 aa19.43■□□□□ 0.7
NXF1-216ENST00000533499 CLTBP09497 229 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 TMOD1P28289 359 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 THPOP40225 353 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 RFC5P40937 340 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 SYKP43405 635 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 DNM2P50570 870 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 NDUFA8P51970 172 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 RAD51AP2Q09MP3 1159 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms