RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 PNMA3Q9UL41 463 aa8.4□□□□□ -1.06
CSRP1-218ENST00000533402 TMEM191CA6NGB0 347 aa8.4□□□□□ -1.06
CSRP1-218ENST00000533402 SFI1A8K8P3 1242 aa8.4□□□□□ -1.06
CSRP1-218ENST00000533402 TMEM191BP0C7N4 346 aa8.4□□□□□ -1.06
CSRP1-218ENST00000533402 LTKP29376 864 aa8.4□□□□□ -1.06
CSRP1-218ENST00000533402 VCPP55072 806 aaKnown RBP8.4□□□□□ -1.06
CSRP1-218ENST00000533402 ARHGEF25Q86VW2 580 aa8.4□□□□□ -1.06
CSRP1-218ENST00000533402 CDKL2Q92772 493 aa8.4□□□□□ -1.06
CSRP1-218ENST00000533402 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.4□□□□□ -1.06
CSRP1-218ENST00000533402 APOBEC2Q9Y235 224 aaKnown RBP8.4□□□□□ -1.06
CSRP1-218ENST00000533402 GMEB1Q9Y692 573 aa8.4□□□□□ -1.06
CSRP1-218ENST00000533402 OVOS2A0A0G2JMS6 1433 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 SSH2Q76I76 1423 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 FAM170AA1A519 330 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 CCT8L1PA6NM43 557 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 RASA4BC9J798 803 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 GSTA4O15217 222 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 RASA4O43374 803 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 DLGAP3O95886 979 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 FTCDO95954 541 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 EXOC8Q8IYI6 725 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 CARD14Q9BXL6 1004 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 LRFN2Q9ULH4 789 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 ANKRD26Q9UPS8 1709 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 H3BRJ5 948 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 OSBPP22059 807 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 DLGAP5Q15398 846 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 TRIM59Q8IWR1 403 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 TRIM8Q9BZR9 551 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 TM6SF1Q9BZW5 370 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 R3HDM2Q9Y2K5 976 aaKnown RBP8.4□□□□□ -1.07
CSRP1-218ENST00000533402 OVOS2A0A0J9YW53 1432 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 OVOS2Q6IE36 1432 aa8.4□□□□□ -1.07
CSRP1-218ENST00000533402 H0YCG3 227 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 FAM107AO95990 144 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 PLS3P13797 630 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 POLR2FP61218 127 aaKnown RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 NFRKBQ6P4R8 1299 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 SPATA21Q7Z572 469 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 NMD3Q96D46 503 aaKnown RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 CUEDC2Q9H467 287 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 DNAJC17Q9NVM6 304 aaKnown RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 A0A1W2PQ27 194 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 A0A1W2PQ64 194 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 A0A1W2PQD8 194 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 IGF2BP3O00425 579 aaKnown RBP eCLIP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 P4HA2O15460 535 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 GSPT1P15170 499 aaKnown RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 ATP6V1B1P15313 513 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 IQCB1Q15051 598 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 LETM2Q2VYF4 491 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 PIK3AP1Q6ZUJ8 805 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 WDR60Q8WVS4 1066 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 RNPEPQ9H4A4 650 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 MRPL40Q9NQ50 206 aaKnown RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 F8W031 263 aaPredicted RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 RNF113AO15541 343 aaKnown RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 CD2BP2O95400 341 aaKnown RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 SERPINB2P05120 415 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 TFAP4Q01664 338 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 KRT40Q6A162 431 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 TRIM74Q86UV6 250 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 TRIM73Q86UV7 250 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 EGFL6Q8IUX8 553 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 KIF2BQ8N4N8 673 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 NAF1Q96HR8 494 aaKnown RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 AP1M1Q9BXS5 423 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 NHEJ1Q9H9Q4 299 aaPredicted RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 METP08581 1390 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 SLIT1O75093 1534 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 ZBTB7BO15156 539 aaPredicted RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 MYBL1P10243 752 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 CYP7A1P22680 504 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 ADARP55265 1226 aaKnown RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 PTPRUQ92729 1446 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 MROH5Q6ZUA9 1318 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 A0A087WWV3 80 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 XRCC5P13010 732 aaKnown RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 FSCBQ5H9T9 825 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 PLD3Q8IV08 490 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 METTL22Q9BUU2 404 aaPredicted RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 AP5M1Q9H0R1 490 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 BSDC1Q9NW68 430 aaPredicted RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 USP15Q9Y4E8 981 aaPredicted RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 ZNF839A8K0R7 811 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 XPOTO43592 962 aaKnown RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 HSPA6P17066 643 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 TMOD1P28289 359 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 BFSP1Q12934 665 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 HIC1Q14526 733 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 NLGN1Q8N2Q7 840 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 CALML6Q8TD86 181 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 PKD2L2Q9NZM6 624 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 IGSF1Q8N6C5 1336 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 TCP11X1B4DZS4 312 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 SEC24DO94855 1032 aaPredicted RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 DSG1Q02413 1049 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 NR1H3Q13133 447 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 SF3B3Q15393 1217 aaKnown RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 DCLK2Q8N568 766 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms