RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 PCDHA7Q9UN72 937 aa18.92■□□□□ 0.62
PAX6-228ENST00000533333 HSPA1AP0DMV8 641 aaKnown RBP18.91■□□□□ 0.62
PAX6-228ENST00000533333 HSPA1BP0DMV9 641 aaKnown RBP18.91■□□□□ 0.62
PAX6-228ENST00000533333 MED21Q13503 144 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 ZFP42Q96MM3 310 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 CDC23Q9UJX2 597 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 PCDHGB4Q9UN71 923 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 EFTUD2Q15029 972 aaKnown RBP eCLIP18.91■□□□□ 0.62
PAX6-228ENST00000533333 TRIM54Q9BYV2 358 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 ZMYND12Q9H0C1 365 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 PARVGQ9HBI0 331 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 NESP48681 1621 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 RNF103-CHMP3A0A140T963 221 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 K7ERI5 159 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 SERPIND1P05546 499 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 USPL1Q5W0Q7 1092 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 RUBCNLQ9H714 662 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 XDHP47989 1333 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 ZNF667Q5HYK9 610 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 THNSL1Q8IYQ7 743 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 CCNYL1Q8N7R7 359 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 NEK9Q8TD19 979 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 TBCKQ8TEA7 893 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 SAYSD1Q9NPB0 183 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 PNMA3Q9UL41 463 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 POLR3AO14802 1390 aaPredicted RBP18.91■□□□□ 0.62
PAX6-228ENST00000533333 CCDC151A5D8V7 595 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 MIGA2Q7L4E1 593 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 AK8Q96MA6 479 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 ACAP3Q96P50 834 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 SP110Q9HB58 689 aa18.91■□□□□ 0.62
PAX6-228ENST00000533333 TJP3O95049 919 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 ACSL3O95573 720 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 TEDDM1Q5T9Z0 273 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 AP1M1Q9BXS5 423 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 SPDYE5A6NIY4 337 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 F5H423 210 aaPredicted RBP18.9■□□□□ 0.62
PAX6-228ENST00000533333 SPDYE7PQ495Y7 208 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 DYDC2Q96IM9 177 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 ZNF496Q96IT1 587 aaPredicted RBP18.9■□□□□ 0.62
PAX6-228ENST00000533333 MRPL28Q13084 256 aaKnown RBP18.9■□□□□ 0.62
PAX6-228ENST00000533333 RGS9BPQ6ZS82 235 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 KDM4CQ9H3R0 1056 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
PAX6-228ENST00000533333 UBA6A0AVT1 1052 aaPredicted RBP18.9■□□□□ 0.62
PAX6-228ENST00000533333 ZNF197O14709 1029 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 SEC31AO94979 1220 aaKnown RBP18.9■□□□□ 0.62
PAX6-228ENST00000533333 NNTQ13423 1086 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 RC3H1Q5TC82 1133 aaKnown RBP18.9■□□□□ 0.62
PAX6-228ENST00000533333 CC2D2BQ6DHV5 1058 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 TWF2Q6IBS0 349 aaKnown RBP18.9■□□□□ 0.62
PAX6-228ENST00000533333 SLFN12LQ6IEE8 588 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 NUDT18Q6ZVK8 323 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 PIGSQ96S52 555 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 RGL1Q9NZL6 768 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 DOLKQ9UPQ8 538 aa18.9■□□□□ 0.62
PAX6-228ENST00000533333 GCFC2P16383 781 aaKnown RBP18.89■□□□□ 0.62
PAX6-228ENST00000533333 DDX5P17844 614 aaKnown RBP18.89■□□□□ 0.62
PAX6-228ENST00000533333 SMYD4Q8IYR2 804 aaPredicted RBP18.89■□□□□ 0.62
PAX6-228ENST00000533333 GPBP1L1Q9HC44 474 aaPredicted RBP18.89■□□□□ 0.62
PAX6-228ENST00000533333 MRPL40Q9NQ50 206 aaKnown RBP18.89■□□□□ 0.62
PAX6-228ENST00000533333 ABCC12Q96J65 1359 aa18.89■□□□□ 0.62
PAX6-228ENST00000533333 HUS1O60921 280 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 PCP11498 1178 aaKnown RBP18.89■□□□□ 0.61
PAX6-228ENST00000533333 KANSL2Q9H9L4 492 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 FBXL5Q9UKA1 691 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 TRIM33Q9UPN9 1127 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 ALS2CLQ60I27 953 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 ZBTB38Q8NAP3 1195 aaPredicted RBP18.89■□□□□ 0.61
PAX6-228ENST00000533333 BTBD6Q96KE9 485 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 OSBPL10Q9BXB5 764 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 LMBRD1Q9NUN5 540 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 ADA2Q9NZK5 511 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 KIAA0586Q9BVV6 1533 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 ORC4O43929 436 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 RAD17O75943 681 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 ASMTLO95671 621 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 CCDC159P0C7I6 412 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 PCYT1AP49585 367 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 HDAC4P56524 1084 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 HDLBPQ00341 1268 aaKnown RBP18.89■□□□□ 0.61
PAX6-228ENST00000533333 BIVM-ERCC5R4GMW8 1640 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 CCDC195A0A1B0GUA6 201 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 GUCY2CP25092 1073 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 ZNF394Q53GI3 561 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 CC2D1AQ6P1N0 951 aaPredicted RBP18.89■□□□□ 0.61
PAX6-228ENST00000533333 TBC1D19Q8N5T2 526 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 DNAJC7Q99615 494 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 PCDHA5Q9Y5H7 936 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 HEY1Q9Y5J3 304 aa18.89■□□□□ 0.61
PAX6-228ENST00000533333 ERVV-2B6SEH9 535 aa18.88■□□□□ 0.61
PAX6-228ENST00000533333 FGAP02671 866 aa18.88■□□□□ 0.61
PAX6-228ENST00000533333 KCNA2P16389 499 aa18.88■□□□□ 0.61
PAX6-228ENST00000533333 ZC3H18Q86VM9 953 aaKnown RBP18.88■□□□□ 0.61
PAX6-228ENST00000533333 RASSF3Q86WH2 238 aa18.88■□□□□ 0.61
PAX6-228ENST00000533333 PGBD3Q8N328 593 aa18.88■□□□□ 0.61
PAX6-228ENST00000533333 COA7Q96BR5 231 aa18.88■□□□□ 0.61
PAX6-228ENST00000533333 TM6SF1Q9BZW5 370 aa18.88■□□□□ 0.61
PAX6-228ENST00000533333 EMILIN3Q9NT22 766 aa18.88■□□□□ 0.61
PAX6-228ENST00000533333 A0A0D9SFI3 127 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms