RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 HOXD8P13378 290 aaPredicted RBP17.72■□□□□ 0.43
TRIM3-213ENST00000533309 CYBAP13498 195 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 PRCPP42785 496 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 MAPK7Q13164 816 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 CCDC65Q8IXS2 484 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 DAW1Q8N136 415 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 AOPEPQ8N6M6 819 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 POLD4Q9HCU8 107 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 SEPT9Q9UHD8 586 aaPredicted RBP17.72■□□□□ 0.43
TRIM3-213ENST00000533309 NRBP1Q9UHY1 535 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 DACH1Q9UI36 760 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 PCDHA2Q9Y5H9 948 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 ZNF131P52739 623 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 NCAPHQ15003 741 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 FAM26FQ5R3K3 315 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 OTUD6AQ7L8S5 288 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 PLPPR4Q7Z2D5 763 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 ADSSL1Q8N142 457 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 GLIS3Q8NEA6 775 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 ZNF296Q8WUU4 475 aaPredicted RBP17.72■□□□□ 0.43
TRIM3-213ENST00000533309 LENG1Q96BZ8 264 aaPredicted RBP17.72■□□□□ 0.43
TRIM3-213ENST00000533309 AZI2Q9H6S1 392 aa17.72■□□□□ 0.43
TRIM3-213ENST00000533309 USO1O60763 962 aaKnown RBP17.71■□□□□ 0.43
TRIM3-213ENST00000533309 FKTNO75072 461 aa17.71■□□□□ 0.43
TRIM3-213ENST00000533309 C1QTNF8P60827 252 aa17.71■□□□□ 0.43
TRIM3-213ENST00000533309 PSMD2Q13200 908 aa17.71■□□□□ 0.43
TRIM3-213ENST00000533309 COBLL1Q53SF7 1204 aa17.71■□□□□ 0.43
TRIM3-213ENST00000533309 CT47A1Q5JQC4 288 aaPredicted RBP17.71■□□□□ 0.43
TRIM3-213ENST00000533309 SFR1Q86XK3 245 aa17.71■□□□□ 0.43
TRIM3-213ENST00000533309 OR6J1Q8NGC5 347 aa17.71■□□□□ 0.43
TRIM3-213ENST00000533309 CEP170P1Q96L14 293 aa17.71■□□□□ 0.43
TRIM3-213ENST00000533309 CCDC43Q96MW1 224 aaKnown RBP17.71■□□□□ 0.43
TRIM3-213ENST00000533309 CEP89Q96ST8 783 aa17.71■□□□□ 0.43
TRIM3-213ENST00000533309 NIFKQ9BYG3 293 aaKnown RBP17.71■□□□□ 0.43
TRIM3-213ENST00000533309 FGFBP2Q9BYJ0 223 aa17.71■□□□□ 0.43
TRIM3-213ENST00000533309 SLC39A2Q9NP94 309 aa17.71■□□□□ 0.43
TRIM3-213ENST00000533309 CYP26B1Q9NR63 512 aa17.71■□□□□ 0.43
TRIM3-213ENST00000533309 ODF2LQ9ULJ1 636 aa17.71■□□□□ 0.43
TRIM3-213ENST00000533309 MAPK8IP1Q9UQF2 711 aa17.71■□□□□ 0.43
TRIM3-213ENST00000533309 IKBKBO14920 756 aa17.7■□□□□ 0.42
TRIM3-213ENST00000533309 HIP1RO75146 1068 aa17.7■□□□□ 0.42
TRIM3-213ENST00000533309 TBCAO75347 108 aaKnown RBP17.7■□□□□ 0.42
TRIM3-213ENST00000533309 LGALS2P05162 132 aa17.7■□□□□ 0.42
TRIM3-213ENST00000533309 MMP3P08254 477 aa17.7■□□□□ 0.42
TRIM3-213ENST00000533309 ERCC5P28715 1186 aaPredicted RBP17.7■□□□□ 0.42
TRIM3-213ENST00000533309 TRIM32Q13049 653 aa17.7■□□□□ 0.42
TRIM3-213ENST00000533309 HERC4Q5GLZ8 1057 aaPredicted RBP17.7■□□□□ 0.42
TRIM3-213ENST00000533309 MFSD14CQ5VZR4 134 aa17.7■□□□□ 0.42
TRIM3-213ENST00000533309 TRMT44Q8IYL2 757 aaKnown RBP17.7■□□□□ 0.42
TRIM3-213ENST00000533309 GLG1Q92896 1179 aa17.7■□□□□ 0.42
TRIM3-213ENST00000533309 ERO1AQ96HE7 468 aa17.7■□□□□ 0.42
TRIM3-213ENST00000533309 GTPBP4Q9BZE4 634 aaKnown RBP17.7■□□□□ 0.42
TRIM3-213ENST00000533309 GNRH1P01148 92 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 ELNP15502 786 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 PLCB4Q15147 1175 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 TARBP2Q15633 366 aaKnown RBP17.69■□□□□ 0.42
TRIM3-213ENST00000533309 UVSSAQ2YD98 709 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 KLHL10Q6JEL2 608 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 TLK2Q86UE8 772 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 HSD3B7Q9H2F3 369 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 ZHX3Q9H4I2 956 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 SMARCAD1Q9H4L7 1026 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 XPNPEP1Q9NQW7 623 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 PDLIM7Q9NR12 457 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 TBC1D7Q9P0N9 293 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 TSKSQ9UJT2 592 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 FAM184BQ9ULE4 1060 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 CTNND2Q9UQB3 1225 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 COL4A3BPQ9Y5P4 624 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 KAT6AQ92794 2004 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 A6NJR5 290 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 SFI1A8K8P3 1242 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 GAP43P17677 238 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 MARK3P27448 753 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 HOXD10P28358 340 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 SLC26A2P50443 739 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 MYL5Q02045 173 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 MAP2K1Q02750 393 aaPredicted RBP17.69■□□□□ 0.42
TRIM3-213ENST00000533309 MTERF2Q49AM1 385 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 ATP8B4Q8TF62 1192 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 FAM167AQ96KS9 214 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 FIZ1Q96SL8 496 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 C16orf70Q9BSU1 422 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 TIPINQ9BVW5 301 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 PARVGQ9HBI0 331 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 OLFML3Q9NRN5 406 aa17.69■□□□□ 0.42
TRIM3-213ENST00000533309 SYNRGQ9UMZ2 1314 aa17.68■□□□□ 0.42
TRIM3-213ENST00000533309 EVPLQ92817 2033 aa17.68■□□□□ 0.42
TRIM3-213ENST00000533309 BECN2A8MW95 431 aa17.68■□□□□ 0.42
TRIM3-213ENST00000533309 ZBTB42B2RXF5 422 aa17.68■□□□□ 0.42
TRIM3-213ENST00000533309 DYNC1LI2O43237 492 aaPredicted RBP17.68■□□□□ 0.42
TRIM3-213ENST00000533309 PPFIA4O75335 1185 aa17.68■□□□□ 0.42
TRIM3-213ENST00000533309 DGAT1O75907 488 aa17.68■□□□□ 0.42
TRIM3-213ENST00000533309 FAM13AO94988 1023 aa17.68■□□□□ 0.42
TRIM3-213ENST00000533309 ZNF286BP0CG31 522 aa17.68■□□□□ 0.42
TRIM3-213ENST00000533309 AKR1A1P14550 325 aa17.68■□□□□ 0.42
TRIM3-213ENST00000533309 CASP5P51878 434 aa17.68■□□□□ 0.42
TRIM3-213ENST00000533309 IRX5P78411 483 aaPredicted RBP17.68■□□□□ 0.42
TRIM3-213ENST00000533309 CACNB2Q08289 660 aaPredicted RBP17.68■□□□□ 0.42
TRIM3-213ENST00000533309 PAK1Q13153 545 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms