RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 WRAP73Q9P2S5 460 aaPredicted RBP22.97■■□□□ 1.27
CCS-208ENST00000533244 CDY2AQ9Y6F7 541 aa22.97■■□□□ 1.27
CCS-208ENST00000533244 EVPLQ92817 2033 aa22.96■■□□□ 1.27
CCS-208ENST00000533244 KDM3AQ9Y4C1 1321 aa22.96■■□□□ 1.27
CCS-208ENST00000533244 ABHD14A-ACY1A0A1B0GW23 586 aa22.96■■□□□ 1.27
CCS-208ENST00000533244 ZBBXA8MT70 800 aa22.96■■□□□ 1.27
CCS-208ENST00000533244 MAGEB2O15479 319 aa22.96■■□□□ 1.27
CCS-208ENST00000533244 DKC1O60832 514 aaKnown RBP eCLIP22.96■■□□□ 1.27
CCS-208ENST00000533244 TXKP42681 527 aa22.96■■□□□ 1.27
CCS-208ENST00000533244 IER5Q5VY09 327 aa22.96■■□□□ 1.27
CCS-208ENST00000533244 C4orf32Q8N8J7 132 aa22.96■■□□□ 1.27
CCS-208ENST00000533244 PTPRSQ13332 1948 aa22.96■■□□□ 1.27
CCS-208ENST00000533244 GRXCR1A8MXD5 290 aa22.95■■□□□ 1.26
CCS-208ENST00000533244 EFCAB14O75071 495 aa22.95■■□□□ 1.26
CCS-208ENST00000533244 OR52Z1P0C646 297 aa22.95■■□□□ 1.26
CCS-208ENST00000533244 WDR5P61964 334 aaKnown RBP22.95■■□□□ 1.26
CCS-208ENST00000533244 NBR1Q14596 966 aa22.95■■□□□ 1.26
CCS-208ENST00000533244 LPIN1Q14693 890 aa22.95■■□□□ 1.26
CCS-208ENST00000533244 FBXO47Q5MNV8 452 aa22.95■■□□□ 1.26
CCS-208ENST00000533244 ANO5Q75V66 913 aa22.95■■□□□ 1.26
CCS-208ENST00000533244 C4orf19Q8IY42 314 aa22.95■■□□□ 1.26
CCS-208ENST00000533244 PHOSPHO2Q8TCD6 241 aa22.95■■□□□ 1.26
CCS-208ENST00000533244 SLC9A7Q96T83 725 aa22.95■■□□□ 1.26
CCS-208ENST00000533244 HSD17B14Q9BPX1 270 aa22.95■■□□□ 1.26
CCS-208ENST00000533244 LXNQ9BS40 222 aa22.95■■□□□ 1.26
CCS-208ENST00000533244 SEPT9Q9UHD8 586 aaPredicted RBP22.95■■□□□ 1.26
CCS-208ENST00000533244 TRPV2Q9Y5S1 764 aa22.95■■□□□ 1.26
CCS-208ENST00000533244 SQORQ9Y6N5 450 aa22.95■■□□□ 1.26
CCS-208ENST00000533244 MICAL3Q7RTP6 2002 aa22.95■■□□□ 1.26
CCS-208ENST00000533244 TMEM150BA6NC51 233 aa22.94■■□□□ 1.26
CCS-208ENST00000533244 MCTP1Q6DN14 999 aa22.94■■□□□ 1.26
CCS-208ENST00000533244 NEK9Q8TD19 979 aa22.94■■□□□ 1.26
CCS-208ENST00000533244 SEPT8Q92599 483 aa22.94■■□□□ 1.26
CCS-208ENST00000533244 DYDC2Q96IM9 177 aa22.94■■□□□ 1.26
CCS-208ENST00000533244 EIF2AK1Q9BQI3 630 aaKnown RBP22.94■■□□□ 1.26
CCS-208ENST00000533244 PBX4Q9BYU1 374 aa22.94■■□□□ 1.26
CCS-208ENST00000533244 CELF4Q9BZC1 486 aaKnown RBP22.94■■□□□ 1.26
CCS-208ENST00000533244 RGL1Q9NZL6 768 aa22.94■■□□□ 1.26
CCS-208ENST00000533244 PCDHB6Q9Y5E3 794 aa22.94■■□□□ 1.26
CCS-208ENST00000533244 GBF1Q92538 1859 aa22.94■■□□□ 1.26
CCS-208ENST00000533244 SLITRK3O94933 977 aa22.93■■□□□ 1.26
CCS-208ENST00000533244 GHRP10912 638 aa22.93■■□□□ 1.26
CCS-208ENST00000533244 ATP2A2P16615 1042 aaKnown RBP22.93■■□□□ 1.26
CCS-208ENST00000533244 DNAJB2P25686 324 aa22.93■■□□□ 1.26
CCS-208ENST00000533244 IKBKEQ14164 716 aa22.93■■□□□ 1.26
CCS-208ENST00000533244 RILPL1Q5EBL4 403 aa22.93■■□□□ 1.26
CCS-208ENST00000533244 APBB2Q92870 758 aa22.93■■□□□ 1.26
CCS-208ENST00000533244 IFIH1Q9BYX4 1025 aaKnown RBP22.93■■□□□ 1.26
CCS-208ENST00000533244 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.93■■□□□ 1.26
CCS-208ENST00000533244 TMEM265A0A087WTH1 108 aa22.92■■□□□ 1.26
CCS-208ENST00000533244 IGKV6-21A0A0C4DH24 114 aa22.92■■□□□ 1.26
CCS-208ENST00000533244 POTEMA6NI47 508 aa22.92■■□□□ 1.26
CCS-208ENST00000533244 LYPLA2O95372 231 aa22.92■■□□□ 1.26
CCS-208ENST00000533244 TMEM62Q0P6H9 643 aa22.92■■□□□ 1.26
CCS-208ENST00000533244 MTERF2Q49AM1 385 aa22.92■■□□□ 1.26
CCS-208ENST00000533244 TSHZ1Q6ZSZ6 1077 aa22.92■■□□□ 1.26
CCS-208ENST00000533244 ZSWIM4Q9H7M6 989 aa22.92■■□□□ 1.26
CCS-208ENST00000533244 DDX11L8A8MPP1 907 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 M0QZ92 97 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 SLC34A2O95436 690 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 PDCP20941 246 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 PBX2P40425 430 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 CLCN3P51790 818 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 DEFB103AP81534 67 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 CYP4A11Q02928 519 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 TBC1D8BQ0IIM8 1120 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 CTTNQ14247 550 aaKnown RBP22.91■■□□□ 1.26
CCS-208ENST00000533244 EFCAB12Q6NXP0 572 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 METTL13Q8N6R0 699 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 USP38Q8NB14 1042 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 AGO3Q9H9G7 860 aaKnown RBP22.91■■□□□ 1.26
CCS-208ENST00000533244 PPME1Q9Y570 386 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 KCNJ6P48051 423 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 FXR2P51116 673 aaKnown RBP eCLIP22.91■■□□□ 1.26
CCS-208ENST00000533244 RAB30Q15771 203 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 PLA2G4FQ68DD2 849 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 LRRC71Q8N4P6 559 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 SH2D3AQ9BRG2 576 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 CYP26B1Q9NR63 512 aa22.91■■□□□ 1.26
CCS-208ENST00000533244 LOXHD1Q8IVV2 1947 aa22.9■■□□□ 1.26
CCS-208ENST00000533244 ARID2Q68CP9 1835 aa22.9■■□□□ 1.26
CCS-208ENST00000533244 LAD1O00515 517 aa22.9■■□□□ 1.26
CCS-208ENST00000533244 GPR32O75388 356 aa22.9■■□□□ 1.26
CCS-208ENST00000533244 MAFO75444 373 aaPredicted RBP22.9■■□□□ 1.26
CCS-208ENST00000533244 TMOD1P28289 359 aa22.9■■□□□ 1.26
CCS-208ENST00000533244 YWHABP31946 246 aaKnown RBP22.9■■□□□ 1.26
CCS-208ENST00000533244 TECP42680 631 aa22.9■■□□□ 1.26
CCS-208ENST00000533244 PTGDRQ13258 359 aa22.9■■□□□ 1.26
CCS-208ENST00000533244 Q7L0L9 218 aa22.9■■□□□ 1.26
CCS-208ENST00000533244 HERC6Q8IVU3 1022 aa22.9■■□□□ 1.26
CCS-208ENST00000533244 TTYH1Q9H313 450 aaPredicted RBP22.9■■□□□ 1.26
CCS-208ENST00000533244 CDHR5Q9HBB8 845 aa22.9■■□□□ 1.26
CCS-208ENST00000533244 PCDHA11Q9Y5I1 949 aa22.9■■□□□ 1.26
CCS-208ENST00000533244 CHD9Q3L8U1 2897 aa22.9■■□□□ 1.26
CCS-208ENST00000533244 VTNP04004 478 aa22.89■■□□□ 1.25
CCS-208ENST00000533244 SPATA31C1P0DKV0 1188 aa22.89■■□□□ 1.25
CCS-208ENST00000533244 NPEPPSP55786 919 aa22.89■■□□□ 1.25
CCS-208ENST00000533244 ZNF697Q5TEC3 545 aa22.89■■□□□ 1.25
CCS-208ENST00000533244 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.89■■□□□ 1.25
CCS-208ENST00000533244 BRAPQ7Z569 592 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms