RNA–Protein interactions for RNA: ENST00000533188.1

CSRP1-217, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 3

Gene CSRP1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-217ENST00000533188 HBP1O60381 514 aa16.31■□□□□ 0.2
CSRP1-217ENST00000533188 CKBP12277 381 aa16.31■□□□□ 0.2
CSRP1-217ENST00000533188 PKP1Q13835 747 aa16.31■□□□□ 0.2
CSRP1-217ENST00000533188 TRAF7Q6Q0C0 670 aa16.31■□□□□ 0.2
CSRP1-217ENST00000533188 CCDC155Q8N6L0 562 aa16.31■□□□□ 0.2
CSRP1-217ENST00000533188 MAFAQ8NHW3 353 aaPredicted RBP16.31■□□□□ 0.2
CSRP1-217ENST00000533188 CAGE1Q8TC20 777 aa16.31■□□□□ 0.2
CSRP1-217ENST00000533188 BBXQ8WY36 941 aaPredicted RBP16.31■□□□□ 0.2
CSRP1-217ENST00000533188 TIFAQ96CG3 184 aa16.31■□□□□ 0.2
CSRP1-217ENST00000533188 FAM167AQ96KS9 214 aa16.31■□□□□ 0.2
CSRP1-217ENST00000533188 LXNQ9BS40 222 aa16.31■□□□□ 0.2
CSRP1-217ENST00000533188 ZNF576Q9H609 170 aa16.31■□□□□ 0.2
CSRP1-217ENST00000533188 RGL1Q9NZL6 768 aa16.31■□□□□ 0.2
CSRP1-217ENST00000533188 SEPT9Q9UHD8 586 aaPredicted RBP16.31■□□□□ 0.2
CSRP1-217ENST00000533188 RRN3P2A6NIE6 340 aa16.3■□□□□ 0.2
CSRP1-217ENST00000533188 STBD1O95210 358 aa16.3■□□□□ 0.2
CSRP1-217ENST00000533188 FGBP02675 491 aa16.3■□□□□ 0.2
CSRP1-217ENST00000533188 CTSHP09668 335 aa16.3■□□□□ 0.2
CSRP1-217ENST00000533188 THPOP40225 353 aa16.3■□□□□ 0.2
CSRP1-217ENST00000533188 TECP42680 631 aa16.3■□□□□ 0.2
CSRP1-217ENST00000533188 PSMC5P62195 406 aa16.3■□□□□ 0.2
CSRP1-217ENST00000533188 BFSP2Q13515 415 aa16.3■□□□□ 0.2
CSRP1-217ENST00000533188 CTTNQ14247 550 aaKnown RBP16.3■□□□□ 0.2
CSRP1-217ENST00000533188 EPHA7Q15375 998 aa16.3■□□□□ 0.2
CSRP1-217ENST00000533188 IL17AQ16552 155 aa16.3■□□□□ 0.2
CSRP1-217ENST00000533188 ZNF618Q5T7W0 954 aa16.3■□□□□ 0.2
CSRP1-217ENST00000533188 FOXD4L5Q5VV16 416 aaPredicted RBP16.3■□□□□ 0.2
CSRP1-217ENST00000533188 PLA2G4FQ68DD2 849 aa16.3■□□□□ 0.2
CSRP1-217ENST00000533188 LRRC8DQ7L1W4 858 aa16.3■□□□□ 0.2
CSRP1-217ENST00000533188 FOXD4L4Q8WXT5 416 aaPredicted RBP16.3■□□□□ 0.2
CSRP1-217ENST00000533188 EIF2AK1Q9BQI3 630 aaKnown RBP16.3■□□□□ 0.2
CSRP1-217ENST00000533188 SH2D3AQ9BRG2 576 aa16.3■□□□□ 0.2
CSRP1-217ENST00000533188 FAM49AQ9H0Q0 323 aaPredicted RBP16.3■□□□□ 0.2
CSRP1-217ENST00000533188 NCOR1O75376 2440 aa16.3■□□□□ 0.2
CSRP1-217ENST00000533188 C22orf31O95567 290 aa16.29■□□□□ 0.2
CSRP1-217ENST00000533188 IQCF3P0C7M6 154 aa16.29■□□□□ 0.2
CSRP1-217ENST00000533188 FOSL2P15408 326 aa16.29■□□□□ 0.2
CSRP1-217ENST00000533188 SELPP16109 830 aa16.29■□□□□ 0.2
CSRP1-217ENST00000533188 QARSP47897 775 aaKnown RBP16.29■□□□□ 0.2
CSRP1-217ENST00000533188 ATP2C1P98194 919 aaPredicted RBP16.29■□□□□ 0.2
CSRP1-217ENST00000533188 MBTPS1Q14703 1052 aa16.29■□□□□ 0.2
CSRP1-217ENST00000533188 MTHFD1LQ6UB35 978 aa16.29■□□□□ 0.2
CSRP1-217ENST00000533188 OTOP2Q7RTS6 562 aa16.29■□□□□ 0.2
CSRP1-217ENST00000533188 RETREG2Q8NC44 543 aa16.29■□□□□ 0.2
CSRP1-217ENST00000533188 MICAL3Q7RTP6 2002 aa16.29■□□□□ 0.2
CSRP1-217ENST00000533188 P4HBP07237 508 aaKnown RBP16.28■□□□□ 0.2
CSRP1-217ENST00000533188 KLRC1P26715 233 aa16.28■□□□□ 0.2
CSRP1-217ENST00000533188 FXR2P51116 673 aaKnown RBP eCLIP16.28■□□□□ 0.2
CSRP1-217ENST00000533188 GPNMBQ14956 572 aa16.28■□□□□ 0.2
CSRP1-217ENST00000533188 TMEM266Q2M3C6 531 aa16.28■□□□□ 0.2
CSRP1-217ENST00000533188 MTERF2Q49AM1 385 aa16.28■□□□□ 0.2
CSRP1-217ENST00000533188 XKR3Q5GH77 459 aa16.28■□□□□ 0.2
CSRP1-217ENST00000533188 ZNF484Q5JVG2 852 aa16.28■□□□□ 0.2
CSRP1-217ENST00000533188 ANO5Q75V66 913 aa16.28■□□□□ 0.2
CSRP1-217ENST00000533188 DEFB128Q7Z7B8 93 aa16.28■□□□□ 0.2
CSRP1-217ENST00000533188 DNAJB3Q8WWF6 145 aa16.28■□□□□ 0.2
CSRP1-217ENST00000533188 COL25A1Q9BXS0 654 aaPredicted RBP16.28■□□□□ 0.2
CSRP1-217ENST00000533188 OSBPL7Q9BZF2 842 aa16.28■□□□□ 0.2
CSRP1-217ENST00000533188 YBX2Q9Y2T7 364 aaKnown RBP16.28■□□□□ 0.2
CSRP1-217ENST00000533188 DDX11L8A8MPP1 907 aa16.27■□□□□ 0.2
CSRP1-217ENST00000533188 PP2D1A8MPX8 630 aa16.27■□□□□ 0.2
CSRP1-217ENST00000533188 LAD1O00515 517 aa16.27■□□□□ 0.2
CSRP1-217ENST00000533188 MED24O75448 989 aa16.27■□□□□ 0.2
CSRP1-217ENST00000533188 PRPHP41219 470 aa16.27■□□□□ 0.2
CSRP1-217ENST00000533188 BECN1Q14457 450 aa16.27■□□□□ 0.2
CSRP1-217ENST00000533188 TARBP2Q15633 366 aaKnown RBP16.27■□□□□ 0.2
CSRP1-217ENST00000533188 TAF2Q6P1X5 1199 aa16.27■□□□□ 0.2
CSRP1-217ENST00000533188 TPH2Q8IWU9 490 aa16.27■□□□□ 0.2
CSRP1-217ENST00000533188 ZNF579Q8NAF0 562 aaKnown RBP16.27■□□□□ 0.2
CSRP1-217ENST00000533188 USP38Q8NB14 1042 aa16.27■□□□□ 0.2
CSRP1-217ENST00000533188 TNPO1Q92973 898 aaKnown RBP16.27■□□□□ 0.2
CSRP1-217ENST00000533188 CEP89Q96ST8 783 aa16.27■□□□□ 0.2
CSRP1-217ENST00000533188 HSD17B14Q9BPX1 270 aa16.27■□□□□ 0.2
CSRP1-217ENST00000533188 PCDHA2Q9Y5H9 948 aa16.27■□□□□ 0.2
CSRP1-217ENST00000533188 CLIC4Q9Y696 253 aa16.27■□□□□ 0.2
CSRP1-217ENST00000533188 ZBTB39O15060 712 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 NBNO60934 754 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 CAND2O75155 1236 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 SLITRK3O94933 977 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 SPATA31C1P0DKV0 1188 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 ZSCAN22P10073 491 aaPredicted RBP16.26■□□□□ 0.19
CSRP1-217ENST00000533188 CLCN3P51790 818 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 NPEPPSP55786 919 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 MGAT3Q09327 533 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 TMEM62Q0P6H9 643 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 SF3A1Q15459 793 aaKnown RBP16.26■□□□□ 0.19
CSRP1-217ENST00000533188 TCTN1Q2MV58 587 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 POTEGQ6S5H5 508 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 C4orf19Q8IY42 314 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 RPUSD2Q8IZ73 545 aaKnown RBP16.26■□□□□ 0.19
CSRP1-217ENST00000533188 LRRC71Q8N4P6 559 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 IGSF22Q8N9C0 903 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 NEK9Q8TD19 979 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 NIFKQ9BYG3 293 aaKnown RBP16.26■□□□□ 0.19
CSRP1-217ENST00000533188 ZSWIM4Q9H7M6 989 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 NRBP2Q9NSY0 501 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 CEP131Q9UPN4 1083 aa16.26■□□□□ 0.19
CSRP1-217ENST00000533188 PRRC2BQ5JSZ5 2229 aaKnown RBP16.25■□□□□ 0.19
CSRP1-217ENST00000533188 A0A087WWV3 80 aa16.25■□□□□ 0.19
CSRP1-217ENST00000533188 SMIM35A0A1B0GVV1 85 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms