RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ZDHHC14Q8IZN3 488 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 FBXL16Q8N461 479 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 DTWD2Q8NBA8 298 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 IGDCC4Q8TDY8 1250 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 CASP10Q92851 521 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 GPKOWQ92917 476 aaPredicted RBP eCLIP12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 AGXT2Q9BYV1 514 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 ADAM7Q9H2U9 754 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 AGO3Q9H9G7 860 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 DLL3Q9NYJ7 618 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 PUF60Q9UHX1 559 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 TPCN1Q9ULQ1 816 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 LZTS1Q9Y250 596 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 PCDHB7Q9Y5E2 793 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 KIAA1671Q9BY89 1806 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 OPLAHO14841 1288 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 IFIT3O14879 490 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 MTHFRP42898 656 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 MRPS6P82932 125 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 PPFIA1Q13136 1202 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 CUL4AQ13619 759 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 CCDC178Q5BJE1 867 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 CWF19L1Q69YN2 538 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 TDRD5Q8NAT2 981 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 PNMA1Q8ND90 353 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 IL31RAQ8NI17 732 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 DNAJB3Q8WWF6 145 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 TMEM87BQ96K49 555 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 HINFPQ9BQA5 517 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 SMOC2Q9H3U7 446 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 POMKQ9H5K3 350 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 BCAS3Q9H6U6 928 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 JMJD4Q9H9V9 463 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 VAT1LQ9HCJ6 419 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 NGRNQ9NPE2 291 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 TUBE1Q9UJT0 475 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 PLXNA4Q9HCM2 1894 aa12.91□□□□□ -0.34
TRAPPC4-213ENST00000533149 MBLAC1A4D2B0 266 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 SPATA31C2B4DYI2 1134 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 M0QZ92 97 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 SH2B2O14492 632 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 ABCB7O75027 752 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 LARGE1O95461 756 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 ASGR2P07307 311 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 HSP90AA1P07900 732 aaKnown RBP12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 HOXA13P31271 388 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 APOBRQ0VD83 1088 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 PAK2Q13177 524 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 ME3Q16798 604 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 PLPP4Q5VZY2 271 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 TCF25Q9BQ70 676 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 ZKSCAN3Q9BRR0 538 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 KAT14Q9H8E8 782 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 ENTPD7Q9NQZ7 604 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 SH2B1Q9NRF2 756 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 LIMD1Q9UGP4 676 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 PADI3Q9ULW8 664 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 USTQ9Y2C2 406 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 PCDHA1Q9Y5I3 950 aa12.9□□□□□ -0.34
TRAPPC4-213ENST00000533149 GCOM1H8Y6P7 765 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 FIBPO43427 364 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 PI15O43692 258 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 PARP1P09874 1014 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 POLR2MP0CAP2 368 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 SDHBP21912 280 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 SARSP49591 514 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 NT5C2P49902 561 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 GATMP50440 423 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 EVCP57679 992 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 PLCB3Q01970 1234 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 TRAF1Q13077 416 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 SART3Q15020 963 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 GRIK4Q16099 956 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 ZC3H14Q6PJT7 736 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 NECAB1Q8N987 351 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 COLGALT1Q8NBJ5 622 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 GIMAP8Q8ND71 665 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 CYP2W1Q8TAV3 490 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 MRPS27Q92552 414 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 RUBCNQ92622 972 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 ZFP91Q96JP5 570 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 INPP4AQ96PE3 977 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 UBAC1Q9BSL1 405 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 MTA3Q9BTC8 594 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 SENP2Q9HC62 589 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 ERAP1Q9NZ08 941 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 BRPF3Q9ULD4 1205 aa12.89□□□□□ -0.35
TRAPPC4-213ENST00000533149 ERICH2A1L162 156 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 TBKBP1A7MCY6 615 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 NPR3P17342 541 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 LAG3P18627 525 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 LIFRP42702 1097 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 STK3Q13188 491 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 IQCA1Q86XH1 822 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 TMTC2Q8N394 836 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 ZNF274Q96GC6 653 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 ZSCAN10Q96SZ4 725 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 SENP7Q9BQF6 1050 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms