RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 TNFRSF25Q93038 417 aa18.76■□□□□ 0.59
PKP3-209ENST00000533069 GJA10Q969M2 543 aa18.76■□□□□ 0.59
PKP3-209ENST00000533069 CELF4Q9BZC1 486 aaKnown RBP18.76■□□□□ 0.59
PKP3-209ENST00000533069 KCNMB3Q9NPA1 279 aa18.76■□□□□ 0.59
PKP3-209ENST00000533069 INSL6Q9Y581 213 aa18.76■□□□□ 0.59
PKP3-209ENST00000533069 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.75■□□□□ 0.59
PKP3-209ENST00000533069 MAGEB2O15479 319 aa18.75■□□□□ 0.59
PKP3-209ENST00000533069 ZNF862O60290 1169 aa18.75■□□□□ 0.59
PKP3-209ENST00000533069 HTRA4P83105 476 aaPredicted RBP18.75■□□□□ 0.59
PKP3-209ENST00000533069 NR5A1Q13285 461 aa18.75■□□□□ 0.59
PKP3-209ENST00000533069 KRT40Q6A162 431 aa18.75■□□□□ 0.59
PKP3-209ENST00000533069 CCDC83Q8IWF9 413 aa18.75■□□□□ 0.59
PKP3-209ENST00000533069 KIAA0319LQ8IZA0 1049 aa18.75■□□□□ 0.59
PKP3-209ENST00000533069 TOP1MTQ969P6 601 aa18.75■□□□□ 0.59
PKP3-209ENST00000533069 FTHL17Q9BXU8 183 aa18.75■□□□□ 0.59
PKP3-209ENST00000533069 CHD7Q9P2D1 2997 aa18.74■□□□□ 0.59
PKP3-209ENST00000533069 LCHNA4D1U4 455 aa18.74■□□□□ 0.59
PKP3-209ENST00000533069 HMGN5P82970 282 aaKnown RBP18.74■□□□□ 0.59
PKP3-209ENST00000533069 TMEM62Q0P6H9 643 aa18.74■□□□□ 0.59
PKP3-209ENST00000533069 PPP2R5CQ13362 524 aa18.74■□□□□ 0.59
PKP3-209ENST00000533069 ADGRE1Q14246 886 aa18.74■□□□□ 0.59
PKP3-209ENST00000533069 UGCGQ16739 394 aa18.74■□□□□ 0.59
PKP3-209ENST00000533069 FAM117BQ6P1L5 589 aa18.74■□□□□ 0.59
PKP3-209ENST00000533069 DIS3L2Q8IYB7 885 aaKnown RBP18.74■□□□□ 0.59
PKP3-209ENST00000533069 ZNF710Q8N1W2 664 aa18.74■□□□□ 0.59
PKP3-209ENST00000533069 ARHGEF15O94989 841 aa18.73■□□□□ 0.59
PKP3-209ENST00000533069 TMOD1P28289 359 aa18.73■□□□□ 0.59
PKP3-209ENST00000533069 CD52P31358 61 aa18.73■□□□□ 0.59
PKP3-209ENST00000533069 PAK2Q13177 524 aa18.73■□□□□ 0.59
PKP3-209ENST00000533069 SAFBQ15424 915 aaKnown RBP eCLIP18.73■□□□□ 0.59
PKP3-209ENST00000533069 XKR3Q5GH77 459 aa18.73■□□□□ 0.59
PKP3-209ENST00000533069 EARS2Q5JPH6 523 aaKnown RBP18.73■□□□□ 0.59
PKP3-209ENST00000533069 TRMT1LQ7Z2T5 733 aaKnown RBP18.73■□□□□ 0.59
PKP3-209ENST00000533069 HSCBQ8IWL3 235 aa18.73■□□□□ 0.59
PKP3-209ENST00000533069 SLFN12Q8IYM2 578 aa18.73■□□□□ 0.59
PKP3-209ENST00000533069 METTL13Q8N6R0 699 aa18.73■□□□□ 0.59
PKP3-209ENST00000533069 SP7Q8TDD2 431 aaPredicted RBP18.73■□□□□ 0.59
PKP3-209ENST00000533069 ARNTL2Q8WYA1 636 aa18.73■□□□□ 0.59
PKP3-209ENST00000533069 AGO3Q9H9G7 860 aaKnown RBP18.73■□□□□ 0.59
PKP3-209ENST00000533069 VAV3Q9UKW4 847 aa18.73■□□□□ 0.59
PKP3-209ENST00000533069 GBF1Q92538 1859 aa18.73■□□□□ 0.59
PKP3-209ENST00000533069 LINC01553A4QN01 128 aa18.72■□□□□ 0.59
PKP3-209ENST00000533069 BTBD18B2RXH4 712 aa18.72■□□□□ 0.59
PKP3-209ENST00000533069 MARCH6O60337 910 aa18.72■□□□□ 0.59
PKP3-209ENST00000533069 DKC1O60832 514 aaKnown RBP eCLIP18.72■□□□□ 0.59
PKP3-209ENST00000533069 BAG4O95429 457 aaKnown RBP18.72■□□□□ 0.59
PKP3-209ENST00000533069 IGFBP4P22692 258 aa18.72■□□□□ 0.59
PKP3-209ENST00000533069 ODR4Q5SWX8 454 aa18.72■□□□□ 0.59
PKP3-209ENST00000533069 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.72■□□□□ 0.592e-8■■■■■ 56.1
PKP3-209ENST00000533069 TGS1Q96RS0 853 aaKnown RBP18.72■□□□□ 0.59
PKP3-209ENST00000533069 MAP7D2Q96T17 732 aa18.72■□□□□ 0.59
PKP3-209ENST00000533069 YME1L1Q96TA2 773 aa18.72■□□□□ 0.59
PKP3-209ENST00000533069 CERS4Q9HA82 394 aa18.72■□□□□ 0.59
PKP3-209ENST00000533069 COL4A6Q14031 1691 aa18.72■□□□□ 0.59
PKP3-209ENST00000533069 FAM205CA6NFA0 338 aa18.71■□□□□ 0.59
PKP3-209ENST00000533069 ENPP3O14638 875 aa18.71■□□□□ 0.59
PKP3-209ENST00000533069 GTPBP6O43824 516 aaPredicted RBP18.71■□□□□ 0.59
PKP3-209ENST00000533069 POU3F3P20264 500 aaPredicted RBP18.71■□□□□ 0.59
PKP3-209ENST00000533069 FOSBP53539 338 aa18.71■□□□□ 0.59
PKP3-209ENST00000533069 ERVK-21P61565 698 aa18.71■□□□□ 0.59
PKP3-209ENST00000533069 PSMC5P62195 406 aa18.71■□□□□ 0.59
PKP3-209ENST00000533069 POTEDQ86YR6 584 aa18.71■□□□□ 0.59
PKP3-209ENST00000533069 LINC01465Q8N7H1 131 aa18.71■□□□□ 0.59
PKP3-209ENST00000533069 HAS1Q92839 578 aa18.71■□□□□ 0.59
PKP3-209ENST00000533069 C8orf76Q96K31 380 aa18.71■□□□□ 0.59
PKP3-209ENST00000533069 NIFKQ9BYG3 293 aaKnown RBP18.71■□□□□ 0.59
PKP3-209ENST00000533069 SEPT9Q9UHD8 586 aaPredicted RBP18.71■□□□□ 0.59
PKP3-209ENST00000533069 PADI3Q9ULW8 664 aa18.71■□□□□ 0.59
PKP3-209ENST00000533069 RBAK-RBAKDNI3L0D1 243 aa18.7■□□□□ 0.58
PKP3-209ENST00000533069 UPP2O95045 317 aa18.7■□□□□ 0.58
PKP3-209ENST00000533069 CRYBB1P53674 252 aaPredicted RBP18.7■□□□□ 0.58
PKP3-209ENST00000533069 TBC1D8BQ0IIM8 1120 aa18.7■□□□□ 0.58
PKP3-209ENST00000533069 TARBP2Q15633 366 aaKnown RBP18.7■□□□□ 0.58
PKP3-209ENST00000533069 EFCAB12Q6NXP0 572 aa18.7■□□□□ 0.58
PKP3-209ENST00000533069 FAM184AQ8NB25 1140 aa18.7■□□□□ 0.58
PKP3-209ENST00000533069 SAMD11Q96NU1 681 aa18.7■□□□□ 0.58
PKP3-209ENST00000533069 DAXXQ9UER7 740 aaPredicted RBP18.7■□□□□ 0.58
PKP3-209ENST00000533069 GINS2Q9Y248 185 aa18.7■□□□□ 0.58
PKP3-209ENST00000533069 PTPRSQ13332 1948 aa18.7■□□□□ 0.58
PKP3-209ENST00000533069 KAT6AQ92794 2004 aa18.69■□□□□ 0.58
PKP3-209ENST00000533069 EPOPA6NHQ4 379 aa18.69■□□□□ 0.58
PKP3-209ENST00000533069 EML1O00423 815 aa18.69■□□□□ 0.58
PKP3-209ENST00000533069 RPS6KA5O75582 802 aa18.69■□□□□ 0.58
PKP3-209ENST00000533069 QARSP47897 775 aaKnown RBP18.69■□□□□ 0.58
PKP3-209ENST00000533069 CLCN3P51790 818 aa18.69■□□□□ 0.58
PKP3-209ENST00000533069 KIZQ2M2Z5 673 aa18.69■□□□□ 0.58
PKP3-209ENST00000533069 BANK1Q8NDB2 785 aa18.69■□□□□ 0.58
PKP3-209ENST00000533069 TSPYL2Q9H2G4 693 aaPredicted RBP18.69■□□□□ 0.58
PKP3-209ENST00000533069 ERVK-5Q9HDB9 667 aa18.69■□□□□ 0.58
PKP3-209ENST00000533069 AKT3Q9Y243 479 aa18.69■□□□□ 0.58
PKP3-209ENST00000533069 PPME1Q9Y570 386 aa18.69■□□□□ 0.58
PKP3-209ENST00000533069 SIP14410 1827 aa18.69■□□□□ 0.58
PKP3-209ENST00000533069 MICAL3Q7RTP6 2002 aa18.69■□□□□ 0.58
PKP3-209ENST00000533069 EYSQ5T1H1 3165 aa18.69■□□□□ 0.58
PKP3-209ENST00000533069 TRANK1O15050 2925 aa18.68■□□□□ 0.58
PKP3-209ENST00000533069 GPR182O15218 404 aa18.68■□□□□ 0.58
PKP3-209ENST00000533069 NEMFO60524 1076 aa18.68■□□□□ 0.58
PKP3-209ENST00000533069 GPR32O75388 356 aa18.68■□□□□ 0.58
PKP3-209ENST00000533069 STBD1O95210 358 aa18.68■□□□□ 0.58
PKP3-209ENST00000533069 VTNP04004 478 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms