RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 SEL1LQ9UBV2 794 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 MAD1L1Q9Y6D9 718 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 UNC13BO14795 1591 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 NRKQ7Z2Y5 1582 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 PPFIA2O75334 1257 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 ZNF445P59923 1031 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 PHLDB2Q86SQ0 1253 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 RWDD2AQ9UIY3 292 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 IQSEC2Q5JU85 1478 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 HPDP32754 393 aaPredicted RBP11.56□□□□□ -0.56
COLCA1-203ENST00000532918 USP11P51784 963 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 THOC5Q13769 683 aaKnown RBP11.56□□□□□ -0.56
COLCA1-203ENST00000532918 MESDQ14696 234 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 ZNF827Q17R98 1081 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 QRICH1Q2TAL8 776 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 CEP85LQ5SZL2 805 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 GKAP1Q5VSY0 366 aaPredicted RBP11.56□□□□□ -0.56
COLCA1-203ENST00000532918 IER5Q5VY09 327 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 RASEFQ8IZ41 740 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 HOMER3Q9NSC5 361 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 SPATS2LQ9NUQ6 558 aaKnown RBP11.56□□□□□ -0.56
COLCA1-203ENST00000532918 DAGLAQ9Y4D2 1042 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.56□□□□□ -0.56
COLCA1-203ENST00000532918 MED14O60244 1454 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 CTNND1O60716 968 aaKnown RBP11.56□□□□□ -0.56
COLCA1-203ENST00000532918 PPFIA4O75335 1185 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 PLEKHA8P1O95397 391 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 EPHA10Q5JZY3 1008 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 TOGARAM2Q6ZUX3 1019 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 TTC30AQ86WT1 665 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 KCTD6Q8NC69 237 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 PSMB7Q99436 277 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 ADARB2Q9NS39 739 aaKnown RBP11.56□□□□□ -0.56
COLCA1-203ENST00000532918 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.56□□□□□ -0.56
COLCA1-203ENST00000532918 PCDHA10Q9Y5I2 948 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 KRT1P04264 644 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 ADKP55263 362 aaKnown RBP11.55□□□□□ -0.56
COLCA1-203ENST00000532918 RNF180Q86T96 592 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 ERICH1Q86X53 443 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 CHST13Q8NET6 341 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 PTPRUQ92729 1446 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 GOLGA8QA0A0J9YX86 632 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 GOLGA8OA6NCC3 632 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 GOLGA8NF8WBI6 632 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 NDUFAB1O14561 156 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 ALDH1A1P00352 501 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 NR5A1Q13285 461 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 IQCB1Q15051 598 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 SLC10A5Q5PT55 438 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 ADGRF4Q8IZF3 695 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 TIPINQ9BVW5 301 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 SMARCAD1Q9H4L7 1026 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 EHD2Q9NZN4 543 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 NYAP2Q9P242 653 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 DLC1Q96QB1 1528 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 USP42Q9H9J4 1324 aaKnown RBP11.55□□□□□ -0.56
COLCA1-203ENST00000532918 TROVE2P10155 538 aaKnown RBP eCLIP11.55□□□□□ -0.56
COLCA1-203ENST00000532918 CA4P22748 312 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 ZNF699Q32M78 642 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 SCARA5Q6ZMJ2 495 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 TTC25Q96NG3 672 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 FANCLQ9NW38 375 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 PCDHA5Q9Y5H7 936 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 SGK1O00141 431 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 TFRCP02786 760 aaKnown RBP11.55□□□□□ -0.56
COLCA1-203ENST00000532918 C6orf222P0C671 652 aaPredicted RBP11.55□□□□□ -0.56
COLCA1-203ENST00000532918 HDLBPQ00341 1268 aaKnown RBP11.55□□□□□ -0.56
COLCA1-203ENST00000532918 DNAAF3Q8N9W5 541 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 LMBRD1Q9NUN5 540 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 KIAA0391O15091 583 aaKnown RBP11.55□□□□□ -0.56
COLCA1-203ENST00000532918 MAGEB2O15479 319 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 PFDN1O60925 122 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 CPB1P15086 417 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 HSPA6P17066 643 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 C9orf131Q5VYM1 1079 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 XXYLT1Q8NBI6 393 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 AFAP1L1Q8TED9 768 aa11.55□□□□□ -0.56
COLCA1-203ENST00000532918 RALAP11233 206 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 KRT3P12035 628 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 TBXAS1P24557 533 aaPredicted RBP11.54□□□□□ -0.56
COLCA1-203ENST00000532918 RGS2P41220 211 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 RAD51Q06609 339 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 ANKRD20A3Q5VUR7 823 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 NOP9Q86U38 636 aaKnown RBP11.54□□□□□ -0.56
COLCA1-203ENST00000532918 ACAP3Q96P50 834 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 IPO5O00410 1097 aaKnown RBP11.54□□□□□ -0.56
COLCA1-203ENST00000532918 RGS16O15492 202 aaPredicted RBP11.54□□□□□ -0.56
COLCA1-203ENST00000532918 MOCS3O95396 460 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 CYP2B6P20813 491 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 STAT5BP51692 787 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 YWHAGP61981 247 aaKnown RBP eCLIP11.54□□□□□ -0.56
COLCA1-203ENST00000532918 SPDYE1Q8NFV5 336 aaPredicted RBP11.54□□□□□ -0.56
COLCA1-203ENST00000532918 MORC4Q8TE76 937 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 POLR3FQ9H1D9 316 aaPredicted RBP11.54□□□□□ -0.56
COLCA1-203ENST00000532918 JPH1Q9HDC5 661 aaPredicted RBP11.54□□□□□ -0.56
COLCA1-203ENST00000532918 NBPF26B4DH59 902 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 BUB1O43683 1085 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 PPFIA1Q13136 1202 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 NBPF10Q6P3W6 841 aaKnown RBP11.54□□□□□ -0.56
COLCA1-203ENST00000532918 UNC13DQ70J99 1090 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms