RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 PCDHGC5Q9Y5F6 944 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 COPB2P35606 906 aa16.3■□□□□ 0.2
SSH3-210ENST00000532881 IRAK1P51617 712 aa16.3■□□□□ 0.2
SSH3-210ENST00000532881 EPHA7Q15375 998 aa16.3■□□□□ 0.2
SSH3-210ENST00000532881 EDRF1Q3B7T1 1238 aa16.3■□□□□ 0.2
SSH3-210ENST00000532881 TATDN1Q6P1N9 297 aa16.3■□□□□ 0.2
SSH3-210ENST00000532881 CSRNP1Q96S65 589 aa16.3■□□□□ 0.2
SSH3-210ENST00000532881 CWC15Q9P013 229 aaKnown RBP16.3■□□□□ 0.2
SSH3-210ENST00000532881 TRAF3IP3Q9Y228 551 aa16.3■□□□□ 0.2
SSH3-210ENST00000532881 SLITRK3O94933 977 aa16.3■□□□□ 0.2
SSH3-210ENST00000532881 ABCB4P21439 1286 aa16.3■□□□□ 0.2
SSH3-210ENST00000532881 SREBF1P36956 1147 aa16.3■□□□□ 0.2
SSH3-210ENST00000532881 CCT5P48643 541 aa16.3■□□□□ 0.2
SSH3-210ENST00000532881 CYP2J2P51589 502 aa16.3■□□□□ 0.2
SSH3-210ENST00000532881 NAA35Q5VZE5 725 aa16.3■□□□□ 0.2
SSH3-210ENST00000532881 U2AF1L4Q8WU68 220 aaKnown RBP16.3■□□□□ 0.2
SSH3-210ENST00000532881 SYN2Q92777 582 aaPredicted RBP16.3■□□□□ 0.2
SSH3-210ENST00000532881 DDX47Q9H0S4 455 aaKnown RBP16.3■□□□□ 0.2
SSH3-210ENST00000532881 SAMM50Q9Y512 469 aa16.3■□□□□ 0.2
SSH3-210ENST00000532881 ZNF233A6NK53 670 aa16.29■□□□□ 0.2
SSH3-210ENST00000532881 PDCLQ13371 301 aa16.29■□□□□ 0.2
SSH3-210ENST00000532881 Q4G0T1 1027 aa16.29■□□□□ 0.2
SSH3-210ENST00000532881 ZC3H3Q8IXZ2 948 aaKnown RBP16.29■□□□□ 0.2
SSH3-210ENST00000532881 PIK3R5Q8WYR1 880 aa16.29■□□□□ 0.2
SSH3-210ENST00000532881 ELMO3Q96BJ8 720 aa16.29■□□□□ 0.2
SSH3-210ENST00000532881 PITPNM2Q9BZ72 1349 aa16.29■□□□□ 0.2
SSH3-210ENST00000532881 GREB1LQ9C091 1923 aaPredicted RBP16.29■□□□□ 0.2
SSH3-210ENST00000532881 LRRC37AA6NMS7 1700 aa16.29■□□□□ 0.2
SSH3-210ENST00000532881 MYO3BQ8WXR4 1341 aa16.29■□□□□ 0.2
SSH3-210ENST00000532881 IGLV3-22A0A075B6J6 115 aa16.29■□□□□ 0.2
SSH3-210ENST00000532881 TBCAO75347 108 aaKnown RBP16.29■□□□□ 0.2
SSH3-210ENST00000532881 GNGT1P63211 74 aa16.29■□□□□ 0.2
SSH3-210ENST00000532881 TMEM179Q6ZVK1 233 aa16.29■□□□□ 0.2
SSH3-210ENST00000532881 MIGA2Q7L4E1 593 aa16.29■□□□□ 0.2
SSH3-210ENST00000532881 ERMNQ8TAM6 284 aa16.29■□□□□ 0.2
SSH3-210ENST00000532881 NEUROG2Q9H2A3 272 aa16.29■□□□□ 0.2
SSH3-210ENST00000532881 FBXO28Q9NVF7 368 aa16.29■□□□□ 0.2
SSH3-210ENST00000532881 ZMYM2Q9UBW7 1377 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 DDX3XO00571 662 aaKnown RBP eCLIP16.28■□□□□ 0.2
SSH3-210ENST00000532881 ONECUT3O60422 494 aaPredicted RBP16.28■□□□□ 0.2
SSH3-210ENST00000532881 ALDH1B1P30837 517 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 FLT3P36888 993 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 ITIH3Q06033 890 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 AP3B2Q13367 1082 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 RPS6KA1Q15418 735 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 CBWD6Q4V339 395 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 CBWD3Q5JTY5 395 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 CBWD5Q5RIA9 395 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 PODNQ7Z5L7 613 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 PALB2Q86YC2 1186 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 GLYCTKQ8IVS8 523 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 USP38Q8NB14 1042 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 GLIS2Q9BZE0 524 aaPredicted RBP16.28■□□□□ 0.2
SSH3-210ENST00000532881 CENPHQ9H3R5 247 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 GDF3Q9NR23 364 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 NR2E1Q9Y466 385 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 HSF2BPO75031 334 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 ARP10275 920 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 ERVK-9P63128 1117 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 SLC27A3Q5K4L6 730 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 FRMD5Q7Z6J6 570 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 METTL13Q8N6R0 699 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 ZSWIM2Q8NEG5 633 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 CELF4Q9BZC1 486 aaKnown RBP16.28■□□□□ 0.2
SSH3-210ENST00000532881 NUCKS1Q9H1E3 243 aaKnown RBP16.28■□□□□ 0.2
SSH3-210ENST00000532881 TMX4Q9H1E5 349 aaPredicted RBP16.28■□□□□ 0.2
SSH3-210ENST00000532881 LRRC4CQ9HCJ2 640 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 NRXN2Q9P2S2 1712 aa16.28■□□□□ 0.2
SSH3-210ENST00000532881 IGSF9BQ9UPX0 1349 aa16.27■□□□□ 0.2
SSH3-210ENST00000532881 ZEB2O60315 1214 aa16.27■□□□□ 0.2
SSH3-210ENST00000532881 KIF4AO95239 1232 aa16.27■□□□□ 0.2
SSH3-210ENST00000532881 HLTFQ14527 1009 aaKnown RBP eCLIP16.27■□□□□ 0.2
SSH3-210ENST00000532881 ARHGAP44Q17R89 818 aa16.27■□□□□ 0.2
SSH3-210ENST00000532881 RBM26Q5T8P6 1007 aaKnown RBP16.27■□□□□ 0.2
SSH3-210ENST00000532881 OTOP1Q7RTM1 612 aa16.27■□□□□ 0.2
SSH3-210ENST00000532881 IFT20Q8IY31 132 aa16.27■□□□□ 0.2
SSH3-210ENST00000532881 LNX1Q8TBB1 728 aaPredicted RBP16.27■□□□□ 0.2
SSH3-210ENST00000532881 MASTLQ96GX5 879 aa16.27■□□□□ 0.2
SSH3-210ENST00000532881 RUFY1Q96T51 708 aa16.27■□□□□ 0.2
SSH3-210ENST00000532881 CAPS2Q9BXY5 557 aa16.27■□□□□ 0.2
SSH3-210ENST00000532881 TAS2R14Q9NYV8 317 aa16.27■□□□□ 0.2
SSH3-210ENST00000532881 GRIN2DO15399 1336 aa16.27■□□□□ 0.19
SSH3-210ENST00000532881 TMEM150BA6NC51 233 aa16.27■□□□□ 0.19
SSH3-210ENST00000532881 PDXKO00764 312 aa16.27■□□□□ 0.19
SSH3-210ENST00000532881 CALUO43852 315 aaPredicted RBP16.27■□□□□ 0.19
SSH3-210ENST00000532881 IVLP07476 585 aa16.27■□□□□ 0.19
SSH3-210ENST00000532881 HSPA1LP34931 641 aa16.27■□□□□ 0.19
SSH3-210ENST00000532881 NNTQ13423 1086 aa16.27■□□□□ 0.19
SSH3-210ENST00000532881 DGKZQ13574 1117 aa16.27■□□□□ 0.19
SSH3-210ENST00000532881 LRCH2Q5VUJ6 765 aa16.27■□□□□ 0.19
SSH3-210ENST00000532881 KRT27Q7Z3Y8 459 aa16.27■□□□□ 0.19
SSH3-210ENST00000532881 SH3GL2Q99962 352 aa16.27■□□□□ 0.19
SSH3-210ENST00000532881 IDI2Q9BXS1 227 aa16.27■□□□□ 0.19
SSH3-210ENST00000532881 PCIF1Q9H4Z3 704 aa16.27■□□□□ 0.19
SSH3-210ENST00000532881 TYW1Q9NV66 732 aaKnown RBP16.27■□□□□ 0.19
SSH3-210ENST00000532881 SEPT11Q9NVA2 429 aaKnown RBP16.27■□□□□ 0.19
SSH3-210ENST00000532881 EVI5O60447 810 aa16.26■□□□□ 0.19
SSH3-210ENST00000532881 RPS6KA5O75582 802 aa16.26■□□□□ 0.19
SSH3-210ENST00000532881 FAM13AO94988 1023 aa16.26■□□□□ 0.19
SSH3-210ENST00000532881 EPB41P11171 864 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms