RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 TDHQ8IZJ6 230 aa27.79■■■□□ 2.04
USP48-214ENST00000532737 CCDC155Q8N6L0 562 aa27.79■■■□□ 2.04
USP48-214ENST00000532737 ERMNQ8TAM6 284 aa27.79■■■□□ 2.04
USP48-214ENST00000532737 SH2D3AQ9BRG2 576 aa27.79■■■□□ 2.04
USP48-214ENST00000532737 POLR3CQ9BUI4 534 aaPredicted RBP27.79■■■□□ 2.04
USP48-214ENST00000532737 RAB34Q9BZG1 259 aa27.79■■■□□ 2.04
USP48-214ENST00000532737 TUFT1Q9NNX1 390 aa27.79■■■□□ 2.04
USP48-214ENST00000532737 TFIP11Q9UBB9 837 aaKnown RBP27.79■■■□□ 2.04
USP48-214ENST00000532737 DAXXQ9UER7 740 aaPredicted RBP27.79■■■□□ 2.04
USP48-214ENST00000532737 C22orf31O95567 290 aa27.78■■■□□ 2.04
USP48-214ENST00000532737 THPOP40225 353 aa27.78■■■□□ 2.04
USP48-214ENST00000532737 MTERF2Q49AM1 385 aa27.78■■■□□ 2.04
USP48-214ENST00000532737 GPR153Q6NV75 609 aa27.78■■■□□ 2.04
USP48-214ENST00000532737 TAF2Q6P1X5 1199 aa27.78■■■□□ 2.04
USP48-214ENST00000532737 TRAF7Q6Q0C0 670 aa27.78■■■□□ 2.04
USP48-214ENST00000532737 SCLYQ96I15 445 aa27.78■■■□□ 2.04
USP48-214ENST00000532737 ZNF396Q96N95 335 aaPredicted RBP27.78■■■□□ 2.04
USP48-214ENST00000532737 CEP89Q96ST8 783 aa27.78■■■□□ 2.04
USP48-214ENST00000532737 KAT6AQ92794 2004 aa27.77■■■□□ 2.04
USP48-214ENST00000532737 A0A087WWV3 80 aa27.77■■■□□ 2.04
USP48-214ENST00000532737 IQCF3P0C7M6 154 aa27.77■■■□□ 2.04
USP48-214ENST00000532737 RPA1P27694 616 aa27.77■■■□□ 2.04
USP48-214ENST00000532737 CDC25AP30304 524 aa27.77■■■□□ 2.04
USP48-214ENST00000532737 YWHABP31946 246 aaKnown RBP27.77■■■□□ 2.04
USP48-214ENST00000532737 DDIT3P35638 169 aa27.77■■■□□ 2.04
USP48-214ENST00000532737 NPEPPSP55786 919 aa27.77■■■□□ 2.04
USP48-214ENST00000532737 ZNF618Q5T7W0 954 aa27.77■■■□□ 2.04
USP48-214ENST00000532737 ZNF579Q8NAF0 562 aaKnown RBP27.77■■■□□ 2.04
USP48-214ENST00000532737 DNAJB3Q8WWF6 145 aa27.77■■■□□ 2.04
USP48-214ENST00000532737 CSF2RAP15509 400 aa27.76■■■□□ 2.03
USP48-214ENST00000532737 SELPP16109 830 aa27.76■■■□□ 2.03
USP48-214ENST00000532737 MARCKSP29966 332 aaPredicted RBP27.76■■■□□ 2.03
USP48-214ENST00000532737 CCT6AP40227 531 aaKnown RBP27.76■■■□□ 2.03
USP48-214ENST00000532737 NASPP49321 788 aaPredicted RBP27.76■■■□□ 2.03
USP48-214ENST00000532737 GRIN1Q05586 938 aa27.76■■■□□ 2.03
USP48-214ENST00000532737 SLC39A14Q15043 492 aa27.76■■■□□ 2.03
USP48-214ENST00000532737 ECM1Q16610 540 aa27.76■■■□□ 2.03
USP48-214ENST00000532737 LRRC8DQ7L1W4 858 aa27.76■■■□□ 2.03
USP48-214ENST00000532737 TMEM199Q8N511 208 aa27.76■■■□□ 2.03
USP48-214ENST00000532737 UBE2OQ9C0C9 1292 aaKnown RBP27.76■■■□□ 2.03
USP48-214ENST00000532737 FAM49AQ9H0Q0 323 aaPredicted RBP27.76■■■□□ 2.03
USP48-214ENST00000532737 SMIM35A0A1B0GVV1 85 aa27.75■■■□□ 2.03
USP48-214ENST00000532737 RBAK-RBAKDNI3L0D1 243 aa27.75■■■□□ 2.03
USP48-214ENST00000532737 MAGEB2O15479 319 aa27.75■■■□□ 2.03
USP48-214ENST00000532737 EPHB4P54760 987 aa27.75■■■□□ 2.03
USP48-214ENST00000532737 FPGSQ05932 587 aa27.75■■■□□ 2.03
USP48-214ENST00000532737 HAUS3Q68CZ6 603 aa27.75■■■□□ 2.03
USP48-214ENST00000532737 RPAINQ86UA6 219 aa27.75■■■□□ 2.03
USP48-214ENST00000532737 SNX29Q8TEQ0 813 aa27.75■■■□□ 2.03
USP48-214ENST00000532737 MMTAG2Q9BU76 263 aaKnown RBP27.75■■■□□ 2.03
USP48-214ENST00000532737 CYP26B1Q9NR63 512 aa27.75■■■□□ 2.03
USP48-214ENST00000532737 GPNMBQ14956 572 aa27.74■■■□□ 2.03
USP48-214ENST00000532737 POTEGQ6S5H5 508 aa27.74■■■□□ 2.03
USP48-214ENST00000532737 OTUD6AQ7L8S5 288 aa27.74■■■□□ 2.03
USP48-214ENST00000532737 KIAA0319LQ8IZA0 1049 aa27.74■■■□□ 2.03
USP48-214ENST00000532737 PIGOQ8TEQ8 1089 aa27.74■■■□□ 2.03
USP48-214ENST00000532737 VWCEQ96DN2 955 aa27.74■■■□□ 2.03
USP48-214ENST00000532737 CEP170P1Q96L14 293 aa27.74■■■□□ 2.03
USP48-214ENST00000532737 FBXO2Q9UK22 296 aaPredicted RBP27.74■■■□□ 2.03
USP48-214ENST00000532737 STK24Q9Y6E0 443 aa27.74■■■□□ 2.03
USP48-214ENST00000532737 CAND2O75155 1236 aa27.73■■■□□ 2.03
USP48-214ENST00000532737 CTSHP09668 335 aa27.73■■■□□ 2.03
USP48-214ENST00000532737 TBC1D8BQ0IIM8 1120 aa27.73■■■□□ 2.03
USP48-214ENST00000532737 XKR9Q5GH70 373 aa27.73■■■□□ 2.03
USP48-214ENST00000532737 KRT79Q5XKE5 535 aa27.73■■■□□ 2.03
USP48-214ENST00000532737 EFCAB12Q6NXP0 572 aa27.73■■■□□ 2.03
USP48-214ENST00000532737 RSPH3Q86UC2 560 aa27.73■■■□□ 2.03
USP48-214ENST00000532737 METTL13Q8N6R0 699 aa27.73■■■□□ 2.03
USP48-214ENST00000532737 LINC01465Q8N7H1 131 aa27.73■■■□□ 2.03
USP48-214ENST00000532737 LINC00301Q8NCQ3 95 aa27.73■■■□□ 2.03
USP48-214ENST00000532737 ANKEF1Q9NU02 776 aa27.73■■■□□ 2.03
USP48-214ENST00000532737 MORC2Q9Y6X9 1032 aaPredicted RBP27.73■■■□□ 2.03
USP48-214ENST00000532737 LAMA2P24043 3122 aaKnown RBP27.73■■■□□ 2.03
USP48-214ENST00000532737 RSPH10B2B2RC85 870 aa27.72■■■□□ 2.03
USP48-214ENST00000532737 RSPH10BP0C881 870 aa27.72■■■□□ 2.03
USP48-214ENST00000532737 XRCC6P12956 609 aaKnown RBP eCLIP27.72■■■□□ 2.037e-11■■□□□ 12.1
USP48-214ENST00000532737 DNM1Q05193 864 aaKnown RBP27.72■■■□□ 2.03
USP48-214ENST00000532737 PPIGQ13427 754 aaKnown RBP eCLIP27.72■■■□□ 2.032e-9■■■■□ 19.3
USP48-214ENST00000532737 MBTPS1Q14703 1052 aa27.72■■■□□ 2.03
USP48-214ENST00000532737 STK38Q15208 465 aa27.72■■■□□ 2.03
USP48-214ENST00000532737 FAM26DQ5JW98 314 aa27.72■■■□□ 2.03
USP48-214ENST00000532737 C16orf59Q7L2K0 433 aa27.72■■■□□ 2.03
USP48-214ENST00000532737 LRRC71Q8N4P6 559 aa27.72■■■□□ 2.03
USP48-214ENST00000532737 CHAMP1Q96JM3 812 aa27.72■■■□□ 2.03
USP48-214ENST00000532737 NACC1Q96RE7 527 aa27.72■■■□□ 2.03
USP48-214ENST00000532737 TSHZ2Q9NRE2 1034 aa27.72■■■□□ 2.03
USP48-214ENST00000532737 SRPRBQ9Y5M8 271 aaKnown RBP27.72■■■□□ 2.03
USP48-214ENST00000532737 MAFO75444 373 aaPredicted RBP27.71■■■□□ 2.03
USP48-214ENST00000532737 CHRNA1P02708 482 aa27.71■■■□□ 2.03
USP48-214ENST00000532737 ACRP10323 421 aa27.71■■■□□ 2.03
USP48-214ENST00000532737 MUTP22033 750 aa27.71■■■□□ 2.03
USP48-214ENST00000532737 LONP1P36776 959 aaKnown RBP27.71■■■□□ 2.03
USP48-214ENST00000532737 CLCN3P51790 818 aa27.71■■■□□ 2.03
USP48-214ENST00000532737 AK8Q96MA6 479 aa27.71■■■□□ 2.03
USP48-214ENST00000532737 SUGCTQ9HAC7 445 aa27.71■■■□□ 2.03
USP48-214ENST00000532737 IL23AQ9NPF7 189 aa27.71■■■□□ 2.03
USP48-214ENST00000532737 KIAA1024Q9UPX6 916 aa27.71■■■□□ 2.03
USP48-214ENST00000532737 IGKV6-21A0A0C4DH24 114 aa27.7■■■□□ 2.02
USP48-214ENST00000532737 MRPS6P82932 125 aaKnown RBP27.7■■■□□ 2.02
USP48-214ENST00000532737 MGAT3Q09327 533 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms