RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 IER5Q5VY09 327 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 MTHFD1LQ6UB35 978 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 NLRX1Q86UT6 975 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 CCDC82Q8N4S0 544 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 SRBD1Q8N5C6 995 aaKnown RBP10.29□□□□□ -0.76
USF1-210ENST00000531842 SAMD3Q8N6K7 520 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 AUTS2Q8WXX7 1259 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 GPRASP2Q96D09 838 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 SMARCAD1Q9H4L7 1026 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 CNNM2Q9H8M5 875 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 ENTPD7Q9NQZ7 604 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 RNF19AQ9NV58 838 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 PCDHB12Q9Y5F1 795 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 CACNA1BQ00975 2339 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 DOCK6Q96HP0 2047 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 C9IYK1 514 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 NT5C1B-RDH14C9J2C7 533 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 PROB1E7EW31 1015 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 KLRC1P26715 233 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 PDE4AP27815 886 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 CA8P35219 290 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 ACTR2P61160 394 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 ITGB3BPQ13352 177 aaPredicted RBP10.28□□□□□ -0.76
USF1-210ENST00000531842 HDAC1Q13547 482 aaPredicted RBP10.28□□□□□ -0.76
USF1-210ENST00000531842 PKN1Q16512 942 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 KIZQ2M2Z5 673 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 RARS2Q5T160 578 aaKnown RBP10.28□□□□□ -0.76
USF1-210ENST00000531842 FAM228AQ86W67 206 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 ADSSL1Q8N142 457 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 CUL5Q93034 780 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 OSMRQ99650 979 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 FTHL17Q9BXU8 183 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 AAASQ9NRG9 546 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 LIMD1Q9UGP4 676 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 ST3GAL5Q9UNP4 418 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 PCDHA2Q9Y5H9 948 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 COL4A3Q01955 1670 aa10.28□□□□□ -0.76
USF1-210ENST00000531842 MED19A0JLT2 244 aaPredicted RBP10.27□□□□□ -0.77
USF1-210ENST00000531842 DENND3A2RUS2 1198 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 RRN3P2A6NIE6 340 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 E7EWF7 191 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 M0QZ92 97 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 RPS6KA5O75582 802 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 CCNE2O96020 404 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 VTNP04004 478 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 FGFR4P22455 802 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 NBL1P41271 181 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 CWF19L1Q69YN2 538 aaKnown RBP10.27□□□□□ -0.77
USF1-210ENST00000531842 CHD1LQ86WJ1 897 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 KIAA0319LQ8IZA0 1049 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 RNF169Q8NCN4 708 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 FLCNQ8NFG4 579 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 IGDCC4Q8TDY8 1250 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 RRP36Q96EU6 259 aaKnown RBP10.27□□□□□ -0.77
USF1-210ENST00000531842 CASD1Q96PB1 797 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 RWDD1Q9H446 243 aaPredicted RBP10.27□□□□□ -0.77
USF1-210ENST00000531842 JPH1Q9HDC5 661 aaPredicted RBP10.27□□□□□ -0.77
USF1-210ENST00000531842 JADE2Q9NQC1 790 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 RGS18Q9NS28 235 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 KCNH7Q9NS40 1196 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 SLC9A2Q9UBY0 812 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 PCDHA6Q9UN73 950 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 PCDHA8Q9Y5H6 950 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 HCFC2Q9Y5Z7 792 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 EPG5Q9HCE0 2579 aa10.27□□□□□ -0.77
USF1-210ENST00000531842 SMIM35A0A1B0GVV1 85 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 ZBTB42B2RXF5 422 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 PIK3CDO00329 1044 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 ADAMTS3O15072 1205 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 CLASP2O75122 1294 aaKnown RBP10.26□□□□□ -0.77
USF1-210ENST00000531842 EPCAMP16422 314 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 ATP4AP20648 1035 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 ID4P47928 161 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 STAT5BP51692 787 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 LONRF3Q496Y0 759 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 KCNT2Q6UVM3 1135 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 TMEM184AQ6ZMB5 413 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 TMC7Q7Z402 723 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 CATIPQ7Z7H3 387 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 TMEM173Q86WV6 379 aaPredicted RBP10.26□□□□□ -0.77
USF1-210ENST00000531842 TICAM2Q86XR7 235 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 ZNF654Q8IZM8 581 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 GIMAP8Q8ND71 665 aaPredicted RBP10.26□□□□□ -0.77
USF1-210ENST00000531842 ST13P5Q8NFI4 369 aaPredicted RBP10.26□□□□□ -0.77
USF1-210ENST00000531842 MRPS27Q92552 414 aaKnown RBP10.26□□□□□ -0.77
USF1-210ENST00000531842 PSTPIP2Q9H939 334 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 LY9Q9HBG7 655 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 SORCS3Q9UPU3 1222 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 SQORQ9Y6N5 450 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 DOCK8Q8NF50 2099 aa10.26□□□□□ -0.77
USF1-210ENST00000531842 TPRP12270 2363 aaKnown RBP10.25□□□□□ -0.77
USF1-210ENST00000531842 CACNA1IQ9P0X4 2223 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 ERICH2A1L162 156 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 C2orf71A6NGG8 1288 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 CSDE1O75534 798 aaKnown RBP10.25□□□□□ -0.77
USF1-210ENST00000531842 MYBP10242 640 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 GSPT1P15170 499 aaKnown RBP10.25□□□□□ -0.77
USF1-210ENST00000531842 NPR3P17342 541 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 METAP2P50579 478 aaKnown RBP eCLIP10.25□□□□□ -0.77
USF1-210ENST00000531842 IRX6P78412 446 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms