RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 NLRC3Q7RTR2 1065 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 PHACTR4Q8IZ21 702 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 CCDC89Q8N998 374 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 APPBP2Q92624 585 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 ARMC5Q96C12 935 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 ERP27Q96DN0 273 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 MFSD14AQ96MC6 490 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.32□□□□□ -1.567e-6■■■■□ 21.2
ECHDC1-221ENST00000531582 RTFDC1Q9BY42 306 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 PARD6BQ9BYG5 372 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 NACAP1Q9BZK3 213 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 XPO4Q9C0E2 1151 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 SEMA6BQ9H3T3 888 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 ZWILCHQ9H900 591 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 LGR6Q9HBX8 967 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 TMEM165Q9HC07 324 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 KLHL3Q9UH77 587 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 IP6K2Q9UHH9 426 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 ADAM21Q9UKJ8 722 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 GTF3C4Q9UKN8 822 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 CEP131Q9UPN4 1083 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 LEMD3Q9Y2U8 911 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 MRPL11Q9Y3B7 192 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 SPO11Q9Y5K1 396 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 LAMC3Q9Y6N6 1575 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 MAPKBP1O60336 1514 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 PLEKHH2Q8IVE3 1493 aa5.32□□□□□ -1.56
ECHDC1-221ENST00000531582 MTUS2Q5JR59 1369 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 KIF15Q9NS87 1388 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 WDR64B1ANS9 1081 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 M0R2C6 588 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 TNFRSF10CO14798 259 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 CPLX1O14810 134 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 RGS13O14921 159 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 DYNC1LI2O43237 492 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 FSBPO95073 299 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 MBD4O95243 580 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 FGAP02671 866 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 F13BP05160 661 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 FAM87AP0C7U9 286 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 RBP3P10745 1247 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 ALOX15P16050 662 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 DNAJA1P31689 397 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 GBP1P32455 592 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 KIF5BP33176 963 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 CSTF2P33240 577 aaKnown RBP eCLIP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 CA8P35219 290 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 GNL1P36915 607 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 GIPRP48546 466 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 PEX5P50542 639 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 OXCT1P55809 520 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 NLRP5P59047 1200 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 ITIH3Q06033 890 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 CDK5R2Q13319 367 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 SAFB2Q14151 953 aaKnown RBP eCLIP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 SMC1AQ14683 1233 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 RABL6Q3YEC7 729 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 CCDC153Q494R4 210 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 TNNI3KQ59H18 835 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 CEP85LQ5SZL2 805 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 EGFLAMQ63HQ2 1017 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 KAZNQ674X7 775 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 NANOGNBQ7Z5D8 188 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 ITPRIPQ8IWB1 547 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 LSMEM2Q8N112 164 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 CRACR2BQ8N4Y2 399 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 FBXL6Q8N531 539 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 ESX1Q8N693 406 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 TOP6BLQ8N6T0 577 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 PAF1Q8N7H5 531 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 C19orf47Q8N9M1 422 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 NGDNQ8NEJ9 315 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 SHKBP1Q8TBC3 707 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 WDR66Q8TBY9 1149 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 BRSK1Q8TDC3 778 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 DIS3LQ8TF46 1054 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 LMBR1Q8WVP7 490 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 CTNNBL1Q8WYA6 563 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 CDKL2Q92772 493 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 GATA6Q92908 595 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 ATP6V0A1Q93050 837 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 IL17RAQ96F46 866 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 UROC1Q96N76 676 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 SPAG5Q96R06 1193 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 CTAGE1Q96RT6 745 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 SMC6Q96SB8 1091 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 MIPEPQ99797 713 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 HAUS7Q99871 368 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 MOV10L1Q9BXT6 1211 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 PARVGQ9HBI0 331 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 EPB41L4AQ9HCS5 686 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 PRDM5Q9NQX1 630 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 PAPOLBQ9NRJ5 636 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 KCND1Q9NSA2 647 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 MIS18AQ9NYP9 233 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 STK39Q9UEW8 545 aa5.31□□□□□ -1.56
ECHDC1-221ENST00000531582 POLG2Q9UHN1 485 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms