RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 SV2BQ7L1I2 683 aa19.68■□□□□ 0.74
CTSB-222ENST00000531551 GLT1D1Q96MS3 346 aa19.68■□□□□ 0.74
CTSB-222ENST00000531551 TSEN34Q9BSV6 310 aaKnown RBP19.68■□□□□ 0.74
CTSB-222ENST00000531551 ANKEF1Q9NU02 776 aa19.68■□□□□ 0.74
CTSB-222ENST00000531551 DNM1LO00429 736 aa19.67■□□□□ 0.74
CTSB-222ENST00000531551 ACTN4O43707 911 aaKnown RBP19.67■□□□□ 0.74
CTSB-222ENST00000531551 HBP1O60381 514 aa19.67■□□□□ 0.74
CTSB-222ENST00000531551 SLFN14P0C7P3 912 aa19.67■□□□□ 0.74
CTSB-222ENST00000531551 XRCC6P12956 609 aaKnown RBP eCLIP19.67■□□□□ 0.748e-11■■□□□ 11.5
CTSB-222ENST00000531551 GRAMD1CQ8IYS0 662 aa19.67■□□□□ 0.74
CTSB-222ENST00000531551 KCTD17Q8N5Z5 321 aa19.67■□□□□ 0.74
CTSB-222ENST00000531551 CUEDC2Q9H467 287 aa19.67■□□□□ 0.74
CTSB-222ENST00000531551 CYP26B1Q9NR63 512 aa19.67■□□□□ 0.74
CTSB-222ENST00000531551 INSRRP14616 1297 aa19.67■□□□□ 0.74
CTSB-222ENST00000531551 GJA8P48165 433 aa19.67■□□□□ 0.74
CTSB-222ENST00000531551 PPFIA1Q13136 1202 aa19.67■□□□□ 0.74
CTSB-222ENST00000531551 FAM47CQ5HY64 1035 aa19.67■□□□□ 0.74
CTSB-222ENST00000531551 C7orf31Q8N865 590 aa19.67■□□□□ 0.74
CTSB-222ENST00000531551 SYT2Q8N9I0 419 aaPredicted RBP19.67■□□□□ 0.74
CTSB-222ENST00000531551 TRAPPC12Q8WVT3 735 aa19.67■□□□□ 0.74
CTSB-222ENST00000531551 CRISPLD2Q9H0B8 497 aa19.67■□□□□ 0.74
CTSB-222ENST00000531551 USP25Q9UHP3 1055 aa19.67■□□□□ 0.74
CTSB-222ENST00000531551 DBR1Q9UK59 544 aaKnown RBP19.67■□□□□ 0.74
CTSB-222ENST00000531551 SMIM10L2AP0DMW4 78 aa19.66■□□□□ 0.74
CTSB-222ENST00000531551 SMIM10L2BP0DMW5 78 aa19.66■□□□□ 0.74
CTSB-222ENST00000531551 SLC12A3P55017 1021 aa19.66■□□□□ 0.74
CTSB-222ENST00000531551 NBPF20Q3BBV1 942 aa19.66■□□□□ 0.74
CTSB-222ENST00000531551 COL13A1Q5TAT6 717 aaPredicted RBP19.66■□□□□ 0.74
CTSB-222ENST00000531551 NIFKQ9BYG3 293 aaKnown RBP19.66■□□□□ 0.74
CTSB-222ENST00000531551 STARD7Q9NQZ5 370 aa19.66■□□□□ 0.74
CTSB-222ENST00000531551 A0A1W2PQ45 241 aaPredicted RBP19.65■□□□□ 0.74
CTSB-222ENST00000531551 A0A1W2PQY0 241 aa19.65■□□□□ 0.74
CTSB-222ENST00000531551 HAS3O00219 553 aa19.65■□□□□ 0.74
CTSB-222ENST00000531551 USO1O60763 962 aaKnown RBP19.65■□□□□ 0.74
CTSB-222ENST00000531551 CABYRO75952 493 aa19.65■□□□□ 0.74
CTSB-222ENST00000531551 KRT18P05783 430 aaKnown RBP19.65■□□□□ 0.74
CTSB-222ENST00000531551 RAD51AP2Q09MP3 1159 aa19.65■□□□□ 0.74
CTSB-222ENST00000531551 CAMK4Q16566 473 aa19.65■□□□□ 0.74
CTSB-222ENST00000531551 PADI6Q6TGC4 694 aa19.65■□□□□ 0.74
CTSB-222ENST00000531551 MAEAQ7L5Y9 396 aa19.65■□□□□ 0.74
CTSB-222ENST00000531551 GPBP1Q86WP2 473 aa19.65■□□□□ 0.74
CTSB-222ENST00000531551 PAGE5Q96GU1 130 aa19.65■□□□□ 0.74
CTSB-222ENST00000531551 CCDC34Q96HJ3 373 aa19.65■□□□□ 0.74
CTSB-222ENST00000531551 SETD4Q9NVD3 440 aa19.65■□□□□ 0.74
CTSB-222ENST00000531551 GRIK4Q16099 956 aa19.65■□□□□ 0.74
CTSB-222ENST00000531551 TIGD1Q96MW7 591 aa19.65■□□□□ 0.74
CTSB-222ENST00000531551 HDAC6Q9UBN7 1215 aa19.65■□□□□ 0.74
CTSB-222ENST00000531551 PHF24Q9UPV7 400 aa19.65■□□□□ 0.74
CTSB-222ENST00000531551 CASP1P29466 404 aa19.64■□□□□ 0.73
CTSB-222ENST00000531551 POLGP54098 1239 aaPredicted RBP19.64■□□□□ 0.73
CTSB-222ENST00000531551 AMPD3Q01432 767 aa19.64■□□□□ 0.73
CTSB-222ENST00000531551 TBC1D8BQ0IIM8 1120 aa19.64■□□□□ 0.73
CTSB-222ENST00000531551 ITGA7Q13683 1181 aa19.64■□□□□ 0.73
CTSB-222ENST00000531551 ZNF484Q5JVG2 852 aa19.64■□□□□ 0.73
CTSB-222ENST00000531551 RINT1Q6NUQ1 792 aa19.64■□□□□ 0.73
CTSB-222ENST00000531551 KANK3Q6NY19 840 aa19.64■□□□□ 0.73
CTSB-222ENST00000531551 DYMQ7RTS9 669 aa19.64■□□□□ 0.73
CTSB-222ENST00000531551 ZBTB10Q96DT7 871 aa19.64■□□□□ 0.73
CTSB-222ENST00000531551 RUSC1Q9BVN2 902 aa19.64■□□□□ 0.73
CTSB-222ENST00000531551 SENP6Q9GZR1 1112 aaPredicted RBP19.64■□□□□ 0.73
CTSB-222ENST00000531551 BLZF1Q9H2G9 400 aa19.64■□□□□ 0.73
CTSB-222ENST00000531551 TNMDQ9H2S6 317 aa19.64■□□□□ 0.73
CTSB-222ENST00000531551 MAGEF1Q9HAY2 307 aa19.64■□□□□ 0.73
CTSB-222ENST00000531551 KBTBD4Q9NVX7 518 aa19.64■□□□□ 0.73
CTSB-222ENST00000531551 NPHP3-ACAD11A0A0J9YXS1 232 aa19.63■□□□□ 0.73
CTSB-222ENST00000531551 TRAK2O60296 914 aa19.63■□□□□ 0.73
CTSB-222ENST00000531551 CACNB1Q02641 598 aaPredicted RBP19.63■□□□□ 0.73
CTSB-222ENST00000531551 MTRQ99707 1265 aa19.63■□□□□ 0.73
CTSB-222ENST00000531551 POLD4Q9HCU8 107 aa19.63■□□□□ 0.73
CTSB-222ENST00000531551 C17orf102A2RUQ5 167 aa19.62■□□□□ 0.73
CTSB-222ENST00000531551 CYP11B2P19099 503 aa19.62■□□□□ 0.73
CTSB-222ENST00000531551 TARBP2Q15633 366 aaKnown RBP19.62■□□□□ 0.73
CTSB-222ENST00000531551 SLC7A3Q8WY07 619 aa19.62■□□□□ 0.73
CTSB-222ENST00000531551 LRRC27Q9C0I9 530 aa19.62■□□□□ 0.73
CTSB-222ENST00000531551 NUP62CLQ9H1M0 184 aa19.62■□□□□ 0.73
CTSB-222ENST00000531551 HOOK1Q9UJC3 728 aaKnown RBP19.62■□□□□ 0.73
CTSB-222ENST00000531551 NRCAMQ92823 1304 aa19.62■□□□□ 0.73
CTSB-222ENST00000531551 MYMKA6NI61 221 aa19.62■□□□□ 0.73
CTSB-222ENST00000531551 ZBTB42B2RXF5 422 aa19.62■□□□□ 0.73
CTSB-222ENST00000531551 KLHL40Q2TBA0 621 aa19.62■□□□□ 0.73
CTSB-222ENST00000531551 SKOR2Q2VWA4 1001 aaPredicted RBP19.62■□□□□ 0.73
CTSB-222ENST00000531551 CAVIN1Q6NZI2 390 aaKnown RBP19.62■□□□□ 0.73
CTSB-222ENST00000531551 METTL13Q8N6R0 699 aa19.62■□□□□ 0.73
CTSB-222ENST00000531551 DIS3LQ8TF46 1054 aaKnown RBP19.62■□□□□ 0.73
CTSB-222ENST00000531551 LMBR1Q8WVP7 490 aa19.62■□□□□ 0.73
CTSB-222ENST00000531551 DDX12PQ92771 950 aa19.62■□□□□ 0.73
CTSB-222ENST00000531551 ERCC4Q92889 916 aaPredicted RBP19.62■□□□□ 0.73
CTSB-222ENST00000531551 SUGCTQ9HAC7 445 aa19.62■□□□□ 0.73
CTSB-222ENST00000531551 GRIN2DO15399 1336 aa19.62■□□□□ 0.73
CTSB-222ENST00000531551 RRN3P2A6NIE6 340 aa19.61■□□□□ 0.73
CTSB-222ENST00000531551 DGAT1O75907 488 aa19.61■□□□□ 0.73
CTSB-222ENST00000531551 PRR29P0C7W0 189 aa19.61■□□□□ 0.73
CTSB-222ENST00000531551 KLRC1P26715 233 aa19.61■□□□□ 0.73
CTSB-222ENST00000531551 ZNF200P98182 395 aaPredicted RBP19.61■□□□□ 0.73
CTSB-222ENST00000531551 PNOCQ13519 176 aa19.61■□□□□ 0.73
CTSB-222ENST00000531551 CUL4BQ13620 913 aa19.61■□□□□ 0.73
CTSB-222ENST00000531551 POSTNQ15063 836 aa19.61■□□□□ 0.73
CTSB-222ENST00000531551 ARSHQ5FYA8 562 aa19.61■□□□□ 0.73
CTSB-222ENST00000531551 FAM102BQ5T8I3 360 aa19.61■□□□□ 0.73
CTSB-222ENST00000531551 C1orf186Q6ZWK4 172 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms